RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 CX3CR1P49238 355 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 PRKXP51817 358 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 ESRRGP62508 458 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 ZNF92Q03936 586 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 PAX8Q06710 450 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 FOXL1Q12952 345 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 MAB21L1Q13394 359 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 EIF2B1Q14232 305 aaKnown RBP5.15□□□□□ -1.59
PTCD3-215ENST00000484203 GINS1Q14691 196 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 TIGD6Q17RP2 521 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 RNF151Q2KHN1 245 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 TMEM255AQ5JRV8 349 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 LCN1P1Q5VSP4 162 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 KCTD18Q6PI47 426 aaPredicted RBP5.15□□□□□ -1.59
PTCD3-215ENST00000484203 C9orf139Q6ZV77 190 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 DPY19L4Q7Z388 723 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 SPATA24Q86W54 205 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 ERI1Q8IV48 349 aaKnown RBP5.15□□□□□ -1.59
PTCD3-215ENST00000484203 C10orf67Q8IYJ2 551 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 BCL6BQ8N143 479 aaPredicted RBP5.15□□□□□ -1.59
PTCD3-215ENST00000484203 PARP8Q8N3A8 854 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 PNLDC1Q8NA58 520 aaKnown RBP5.15□□□□□ -1.59
PTCD3-215ENST00000484203 PAPD5Q8NDF8 572 aaKnown RBP5.15□□□□□ -1.59
PTCD3-215ENST00000484203 DEFB108BQ8NET1 73 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 SEMA6DQ8NFY4 1073 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 OR5AN1Q8NGI8 311 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 OR8D4Q8NGM9 314 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 OR9Q1Q8NGQ5 310 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 OTOSQ8NHW6 89 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 CANT1Q8WVQ1 401 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 ASB17Q8WXJ9 295 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 SLC25A28Q96A46 364 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 OTULINQ96BN8 352 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 C12orf43Q96C57 262 aaKnown RBP5.15□□□□□ -1.59
PTCD3-215ENST00000484203 HIST1H2AAQ96QV6 131 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 MNTQ99583 582 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 MICU1Q9BPX6 476 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 OSBPL10Q9BXB5 764 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 PLA2G12AQ9BZM1 189 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 YIPF3Q9GZM5 350 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 MS4A7Q9GZW8 240 aaPredicted RBP5.15□□□□□ -1.59
PTCD3-215ENST00000484203 FN3KQ9H479 309 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 WDR76Q9H967 626 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 MARCH7Q9H992 704 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 ARMC1Q9NVT9 282 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 PDP1Q9P0J1 537 aaPredicted RBP5.15□□□□□ -1.59
PTCD3-215ENST00000484203 OPN4Q9UHM6 478 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 MPC1Q9Y5U8 109 aa5.15□□□□□ -1.59
PTCD3-215ENST00000484203 MALRD1Q5VYJ5 2156 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 IGHV2-70DA0A0C4DH43 119 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 TMEM89A2RUT3 159 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 OOEPA6NGQ2 149 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 A6NLC8 198 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 TMEM210A6NLX4 147 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 P2RY10O00398 339 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 FAM20BO75063 409 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 MTRF1O75570 445 aaKnown RBP5.14□□□□□ -1.59
PTCD3-215ENST00000484203 VENTXO95231 258 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 HLA-DPB1P04440 258 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 ANXA2P07355 339 aaKnown RBP5.14□□□□□ -1.59
PTCD3-215ENST00000484203 PRTN3P24158 256 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 DCTDP32321 178 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 PSMB10P40306 273 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 OPRL1P41146 370 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 ERFP50548 548 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 RPS7P62081 194 aaKnown RBP5.14□□□□□ -1.59
PTCD3-215ENST00000484203 CBX1P83916 185 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 CDK5Q00535 292 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 OR8B8Q15620 311 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 MICBQ29980 383 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 SNAI3Q3KNW1 292 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 GLYATL3Q5SZD4 288 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 LCE5AQ5TCM9 118 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 LINC01590Q5TEZ4 76 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 GPR157Q5UAW9 335 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 OTPQ5XKR4 325 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 DOK3Q7L591 496 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 SLC16A9Q7RTY1 509 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 SLC36A1Q7Z2H8 476 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 TIGD4Q8IY51 512 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 GALNT4Q8N4A0 578 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 C3orf56Q8N813 242 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 OR56B2PQ8NGI1 322 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 OR51L1Q8NGJ5 315 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 OR10S1Q8NGN2 331 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 OR6N2Q8NGY6 317 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 OR4Q3Q8NH05 313 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 SGMS2Q8NHU3 365 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 UPRTQ96BW1 309 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 REEP6Q96HR9 211 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 PGAM5Q96HS1 289 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 CLPTM1LQ96KA5 538 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 MYCBPQ99417 103 aaPredicted RBP5.14□□□□□ -1.59
PTCD3-215ENST00000484203 NIPSNAP1Q9BPW8 284 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 TMEM246Q9BRR3 403 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 ABHD6Q9BV23 337 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 RTL8AQ9BWD3 113 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 MROQ9BYG7 248 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 DNTTIP1Q9H147 329 aa5.14□□□□□ -1.59
PTCD3-215ENST00000484203 OR51V1Q9H2C8 321 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms