RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 PPIAL4GP0DN37 164 aa8.67□□□□□ -1.02
CPSF4-212ENST00000482251 MMP9P14780 707 aa8.67□□□□□ -1.02
CPSF4-212ENST00000482251 HOXB6P17509 224 aaKnown RBP8.67□□□□□ -1.02
CPSF4-212ENST00000482251 ALOX5APP20292 161 aa8.67□□□□□ -1.02
CPSF4-212ENST00000482251 EPHA2P29317 976 aa8.67□□□□□ -1.02
CPSF4-212ENST00000482251 MTNR1AP48039 350 aa8.67□□□□□ -1.02
CPSF4-212ENST00000482251 GPM6AP51674 278 aa8.67□□□□□ -1.02
CPSF4-212ENST00000482251 ARF6P62330 175 aa8.67□□□□□ -1.02
CPSF4-212ENST00000482251 IL5RAQ01344 420 aa8.67□□□□□ -1.02
CPSF4-212ENST00000482251 BNIP1Q12981 228 aa8.67□□□□□ -1.02
CPSF4-212ENST00000482251 PTGES3Q15185 160 aaKnown RBP8.67□□□□□ -1.02
CPSF4-212ENST00000482251 MICBQ29980 383 aa8.67□□□□□ -1.02
CPSF4-212ENST00000482251 TUSC1Q2TAM9 212 aa8.67□□□□□ -1.02
CPSF4-212ENST00000482251 CEP78Q5JTW2 689 aa8.67□□□□□ -1.02
CPSF4-212ENST00000482251 C1orf146Q5VVC0 180 aa8.67□□□□□ -1.02
CPSF4-212ENST00000482251 METTL11BQ5VVY1 283 aa8.67□□□□□ -1.02
CPSF4-212ENST00000482251 CD276Q5ZPR3 534 aa8.67□□□□□ -1.02
CPSF4-212ENST00000482251 PLEKHG7Q6ZR37 379 aa8.67□□□□□ -1.02
CPSF4-212ENST00000482251 AMIGO2Q86SJ2 522 aa8.67□□□□□ -1.02
CPSF4-212ENST00000482251 ZDHHC23Q8IYP9 409 aa8.67□□□□□ -1.02
CPSF4-212ENST00000482251 FTMTQ8N4E7 242 aa8.67□□□□□ -1.02
CPSF4-212ENST00000482251 OR5K1Q8NHB7 308 aa8.67□□□□□ -1.02
CPSF4-212ENST00000482251 LHX4Q969G2 390 aa8.67□□□□□ -1.02
CPSF4-212ENST00000482251 ZDHHC16Q969W1 377 aa8.67□□□□□ -1.02
CPSF4-212ENST00000482251 UTP4Q969X6 686 aaKnown RBP8.67□□□□□ -1.02
CPSF4-212ENST00000482251 SLC25A28Q96A46 364 aa8.67□□□□□ -1.02
CPSF4-212ENST00000482251 FAM71F1Q96KD3 344 aaPredicted RBP8.67□□□□□ -1.02
CPSF4-212ENST00000482251 WDFY2Q96P53 400 aa8.67□□□□□ -1.02
CPSF4-212ENST00000482251 CNN2Q99439 309 aaKnown RBP8.67□□□□□ -1.02
CPSF4-212ENST00000482251 WDR13Q9H1Z4 485 aa8.67□□□□□ -1.02
CPSF4-212ENST00000482251 TRIM36Q9NQ86 728 aa8.67□□□□□ -1.02
CPSF4-212ENST00000482251 FAM206AQ9NX38 181 aa8.67□□□□□ -1.02
CPSF4-212ENST00000482251 ONECUT1Q9UBC0 465 aa8.67□□□□□ -1.02
CPSF4-212ENST00000482251 TMEM269A0A1B0GVZ9 245 aa8.66□□□□□ -1.02
CPSF4-212ENST00000482251 AKR7A2O43488 359 aa8.66□□□□□ -1.02
CPSF4-212ENST00000482251 APOL3O95236 402 aa8.66□□□□□ -1.02
CPSF4-212ENST00000482251 RNASE1P07998 156 aaKnown RBP8.66□□□□□ -1.02
CPSF4-212ENST00000482251 HKR1P10072 659 aa8.66□□□□□ -1.02
CPSF4-212ENST00000482251 FAHP16930 419 aa8.66□□□□□ -1.02
CPSF4-212ENST00000482251 OMGP23515 440 aa8.66□□□□□ -1.02
CPSF4-212ENST00000482251 DLX1P56177 255 aa8.66□□□□□ -1.02
CPSF4-212ENST00000482251 ATP6AP1Q15904 470 aa8.66□□□□□ -1.02
CPSF4-212ENST00000482251 C9orf139Q6ZV77 190 aa8.66□□□□□ -1.02
CPSF4-212ENST00000482251 RHOUQ7L0Q8 258 aa8.66□□□□□ -1.02
CPSF4-212ENST00000482251 GALNT4Q8N4A0 578 aa8.66□□□□□ -1.02
CPSF4-212ENST00000482251 TCEANCQ8N8B7 351 aa8.66□□□□□ -1.02
CPSF4-212ENST00000482251 PNLDC1Q8NA58 520 aaKnown RBP8.66□□□□□ -1.02
CPSF4-212ENST00000482251 SCCPDHQ8NBX0 429 aa8.66□□□□□ -1.02
CPSF4-212ENST00000482251 OR51E1Q8TCB6 317 aa8.66□□□□□ -1.02
CPSF4-212ENST00000482251 DNAJC9Q8WXX5 260 aa8.66□□□□□ -1.02
CPSF4-212ENST00000482251 OR5P3Q8WZ94 311 aa8.66□□□□□ -1.02
CPSF4-212ENST00000482251 H1FXQ92522 213 aaKnown RBP8.66□□□□□ -1.02
CPSF4-212ENST00000482251 PPP1R14AQ96A00 147 aa8.66□□□□□ -1.02
CPSF4-212ENST00000482251 NRBF2Q96F24 287 aa8.66□□□□□ -1.02
CPSF4-212ENST00000482251 RNF170Q96K19 258 aa8.66□□□□□ -1.02
CPSF4-212ENST00000482251 IL4I1Q96RQ9 567 aa8.66□□□□□ -1.02
CPSF4-212ENST00000482251 TEAD3Q99594 435 aa8.66□□□□□ -1.02
CPSF4-212ENST00000482251 YIPF3Q9GZM5 350 aa8.66□□□□□ -1.02
CPSF4-212ENST00000482251 PBOV1Q9GZY1 135 aa8.66□□□□□ -1.02
CPSF4-212ENST00000482251 SIRPDQ9H106 197 aa8.66□□□□□ -1.02
CPSF4-212ENST00000482251 TLNRD1Q9H1K6 362 aa8.66□□□□□ -1.02
CPSF4-212ENST00000482251 SEMA6AQ9H2E6 1030 aa8.66□□□□□ -1.02
CPSF4-212ENST00000482251 ZMAT3Q9HA38 289 aaKnown RBP8.66□□□□□ -1.02
CPSF4-212ENST00000482251 RNPEPL1Q9HAU8 725 aa8.66□□□□□ -1.02
CPSF4-212ENST00000482251 GPR84Q9NQS5 396 aa8.66□□□□□ -1.02
CPSF4-212ENST00000482251 MPC1Q9Y5U8 109 aa8.66□□□□□ -1.02
CPSF4-212ENST00000482251 CENPVL3A0A0U1RRI6 287 aa8.65□□□□□ -1.02
CPSF4-212ENST00000482251 ZNF816-ZNF321PA0A0X1KG74 233 aa8.65□□□□□ -1.02
CPSF4-212ENST00000482251 NKX6-3A6NJ46 265 aa8.65□□□□□ -1.02
CPSF4-212ENST00000482251 SRRM5B3KS81 715 aa8.65□□□□□ -1.02
CPSF4-212ENST00000482251 G3V2T6 193 aa8.65□□□□□ -1.02
CPSF4-212ENST00000482251 H3BSH0 61 aa8.65□□□□□ -1.02
CPSF4-212ENST00000482251 NDUFA2O43678 99 aa8.65□□□□□ -1.02
CPSF4-212ENST00000482251 RHBDL1O75783 438 aa8.65□□□□□ -1.02
CPSF4-212ENST00000482251 CST4P01036 141 aa8.65□□□□□ -1.02
CPSF4-212ENST00000482251 MUC1P15941 1255 aaPredicted RBP8.65□□□□□ -1.02
CPSF4-212ENST00000482251 AMY2BP19961 511 aa8.65□□□□□ -1.02
CPSF4-212ENST00000482251 RIDAP52758 137 aaKnown RBP8.65□□□□□ -1.02
CPSF4-212ENST00000482251 CXCR4P61073 352 aa8.65□□□□□ -1.02
CPSF4-212ENST00000482251 SNCBQ16143 134 aa8.65□□□□□ -1.02
CPSF4-212ENST00000482251 ZNF829Q3KNS6 432 aaPredicted RBP8.65□□□□□ -1.02
CPSF4-212ENST00000482251 PLCXD3Q63HM9 321 aa8.65□□□□□ -1.02
CPSF4-212ENST00000482251 STUMQ69YW2 141 aa8.65□□□□□ -1.02
CPSF4-212ENST00000482251 KCTD18Q6PI47 426 aaPredicted RBP8.65□□□□□ -1.02
CPSF4-212ENST00000482251 SLC36A1Q7Z2H8 476 aa8.65□□□□□ -1.02
CPSF4-212ENST00000482251 VMO1Q7Z5L0 202 aa8.65□□□□□ -1.02
CPSF4-212ENST00000482251 SLC35F2Q8IXU6 374 aa8.65□□□□□ -1.02
CPSF4-212ENST00000482251 BATF2Q8N1L9 274 aa8.65□□□□□ -1.02
CPSF4-212ENST00000482251 LRTOMTQ8WZ04 291 aa8.65□□□□□ -1.02
CPSF4-212ENST00000482251 OR8B4Q96RC9 309 aa8.65□□□□□ -1.02
CPSF4-212ENST00000482251 TBX5Q99593 518 aa8.65□□□□□ -1.02
CPSF4-212ENST00000482251 CIB1Q99828 191 aa8.65□□□□□ -1.02
CPSF4-212ENST00000482251 MROQ9BYG7 248 aa8.65□□□□□ -1.02
CPSF4-212ENST00000482251 PRRG3Q9BZD7 231 aa8.65□□□□□ -1.02
CPSF4-212ENST00000482251 ELL3Q9HB65 397 aaPredicted RBP8.65□□□□□ -1.02
CPSF4-212ENST00000482251 ADGRL4Q9HBW9 690 aa8.65□□□□□ -1.02
CPSF4-212ENST00000482251 SIRT7Q9NRC8 400 aa8.65□□□□□ -1.02
CPSF4-212ENST00000482251 RPUSD1Q9UJJ7 312 aaKnown RBP8.65□□□□□ -1.02
CPSF4-212ENST00000482251 ZNF391Q9UJN7 358 aa8.65□□□□□ -1.02
CPSF4-212ENST00000482251 A0A0U1RQK1 487 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms