RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 BTG1P62324 171 aa9.53□□□□□ -0.88
VTI1A-204ENST00000480057 ACTG1P63261 375 aa9.53□□□□□ -0.88
VTI1A-204ENST00000480057 FOXF2Q12947 444 aa9.53□□□□□ -0.88
VTI1A-204ENST00000480057 SNTB2Q13425 540 aaKnown RBP9.53□□□□□ -0.88
VTI1A-204ENST00000480057 PLA1AQ53H76 456 aa9.53□□□□□ -0.88
VTI1A-204ENST00000480057 CRIP3Q6Q6R5 217 aa9.53□□□□□ -0.88
VTI1A-204ENST00000480057 UNQ6126/PRO20091Q6UXV3 157 aa9.53□□□□□ -0.88
VTI1A-204ENST00000480057 ASCL4Q6XD76 172 aa9.53□□□□□ -0.88
VTI1A-204ENST00000480057 ZNF554Q86TJ5 538 aa9.53□□□□□ -0.88
VTI1A-204ENST00000480057 BIVMQ86UB2 503 aa9.53□□□□□ -0.88
VTI1A-204ENST00000480057 CD163Q86VB7 1156 aa9.53□□□□□ -0.88
VTI1A-204ENST00000480057 C1orf174Q8IYL3 243 aa9.53□□□□□ -0.88
VTI1A-204ENST00000480057 ZNF101Q8IZC7 436 aa9.53□□□□□ -0.88
VTI1A-204ENST00000480057 CADM3Q8N126 398 aa9.53□□□□□ -0.88
VTI1A-204ENST00000480057 STEAP2Q8NFT2 490 aa9.53□□□□□ -0.88
VTI1A-204ENST00000480057 GPX8Q8TED1 209 aa9.53□□□□□ -0.88
VTI1A-204ENST00000480057 AQP3Q92482 292 aa9.53□□□□□ -0.88
VTI1A-204ENST00000480057 CREB3L1Q96BA8 519 aa9.53□□□□□ -0.88
VTI1A-204ENST00000480057 NEDD4LQ96PU5 975 aa9.53□□□□□ -0.88
VTI1A-204ENST00000480057 DPAGT1Q9H3H5 408 aa9.53□□□□□ -0.88
VTI1A-204ENST00000480057 ZNF71Q9NQZ8 489 aaPredicted RBP9.53□□□□□ -0.88
VTI1A-204ENST00000480057 PCDHB16Q9NRJ7 776 aa9.53□□□□□ -0.88
VTI1A-204ENST00000480057 EIF3KQ9UBQ5 218 aaKnown RBP9.53□□□□□ -0.88
VTI1A-204ENST00000480057 ZNF835Q9Y2P0 537 aa9.53□□□□□ -0.88
VTI1A-204ENST00000480057 RAXQ9Y2V3 346 aa9.53□□□□□ -0.88
VTI1A-204ENST00000480057 AMDHD2Q9Y303 409 aa9.53□□□□□ -0.88
VTI1A-204ENST00000480057 PRRG2O14669 202 aa9.52□□□□□ -0.89
VTI1A-204ENST00000480057 CDC14BO60729 498 aa9.52□□□□□ -0.89
VTI1A-204ENST00000480057 TOXO94900 526 aa9.52□□□□□ -0.89
VTI1A-204ENST00000480057 IGKV3-15P01624 115 aa9.52□□□□□ -0.89
VTI1A-204ENST00000480057 GSTP1P09211 210 aaKnown RBP9.52□□□□□ -0.89
VTI1A-204ENST00000480057 CCNOP22674 350 aa9.52□□□□□ -0.89
VTI1A-204ENST00000480057 RBP2P50120 134 aa9.52□□□□□ -0.89
VTI1A-204ENST00000480057 ATP1B3P54709 279 aa9.52□□□□□ -0.89
VTI1A-204ENST00000480057 ZP1P60852 638 aa9.52□□□□□ -0.89
VTI1A-204ENST00000480057 GK2Q14410 553 aaPredicted RBP9.52□□□□□ -0.89
VTI1A-204ENST00000480057 C11orf91Q3C1V1 193 aa9.52□□□□□ -0.89
VTI1A-204ENST00000480057 C3orf36Q3SXR2 165 aa9.52□□□□□ -0.89
VTI1A-204ENST00000480057 AGAP6Q5VW22 663 aa9.52□□□□□ -0.89
VTI1A-204ENST00000480057 FAM89BQ8N5H3 189 aa9.52□□□□□ -0.89
VTI1A-204ENST00000480057 CELF2-AS1Q8N7Q2 184 aa9.52□□□□□ -0.89
VTI1A-204ENST00000480057 ZNF610Q8N9Z0 462 aa9.52□□□□□ -0.89
VTI1A-204ENST00000480057 ZSCAN4Q8NAM6 433 aaPredicted RBP9.52□□□□□ -0.89
VTI1A-204ENST00000480057 PXT1Q8NFP0 134 aa9.52□□□□□ -0.89
VTI1A-204ENST00000480057 OR56B1Q8NGI3 324 aa9.52□□□□□ -0.89
VTI1A-204ENST00000480057 OR10R2Q8NGX6 335 aa9.52□□□□□ -0.89
VTI1A-204ENST00000480057 TNFAIP8L1Q8WVP5 186 aa9.52□□□□□ -0.89
VTI1A-204ENST00000480057 MRPS24Q96EL2 167 aaKnown RBP9.52□□□□□ -0.89
VTI1A-204ENST00000480057 BORCS8Q96FH0 119 aa9.52□□□□□ -0.89
VTI1A-204ENST00000480057 S100A13Q99584 98 aa9.52□□□□□ -0.89
VTI1A-204ENST00000480057 USB1Q9BQ65 265 aaKnown RBP9.52□□□□□ -0.89
VTI1A-204ENST00000480057 TM2D1Q9BX74 207 aa9.52□□□□□ -0.89
VTI1A-204ENST00000480057 TMEM59Q9BXS4 323 aa9.52□□□□□ -0.89
VTI1A-204ENST00000480057 LPAR5Q9H1C0 372 aa9.52□□□□□ -0.89
VTI1A-204ENST00000480057 PIGMQ9H3S5 423 aa9.52□□□□□ -0.89
VTI1A-204ENST00000480057 KCNK15Q9H427 330 aa9.52□□□□□ -0.89
VTI1A-204ENST00000480057 CDH20Q9HBT6 801 aa9.52□□□□□ -0.89
VTI1A-204ENST00000480057 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.52□□□□□ -0.89
VTI1A-204ENST00000480057 GPR173Q9NS66 373 aa9.52□□□□□ -0.89
VTI1A-204ENST00000480057 IL36GQ9NZH8 169 aa9.52□□□□□ -0.89
VTI1A-204ENST00000480057 NUBP2Q9Y5Y2 271 aa9.52□□□□□ -0.89
VTI1A-204ENST00000480057 MSTNO14793 375 aa9.51□□□□□ -0.89
VTI1A-204ENST00000480057 ZNHIT1O43257 154 aa9.51□□□□□ -0.89
VTI1A-204ENST00000480057 CA11O75493 328 aa9.51□□□□□ -0.89
VTI1A-204ENST00000480057 LYZL6O75951 148 aa9.51□□□□□ -0.89
VTI1A-204ENST00000480057 IGLV1-44P01699 117 aa9.51□□□□□ -0.89
VTI1A-204ENST00000480057 BTCP35070 178 aa9.51□□□□□ -0.89
VTI1A-204ENST00000480057 OPRM1P35372 400 aa9.51□□□□□ -0.89
VTI1A-204ENST00000480057 WNT5AP41221 380 aa9.51□□□□□ -0.89
VTI1A-204ENST00000480057 SRP9P49458 86 aaKnown RBP9.51□□□□□ -0.89
VTI1A-204ENST00000480057 MTCP1P56278 107 aa9.51□□□□□ -0.89
VTI1A-204ENST00000480057 RPS27AP62979 156 aaKnown RBP9.51□□□□□ -0.89
VTI1A-204ENST00000480057 CXADRP78310 365 aa9.51□□□□□ -0.89
VTI1A-204ENST00000480057 RBPJQ06330 500 aa9.51□□□□□ -0.89
VTI1A-204ENST00000480057 PPA1Q15181 289 aa9.51□□□□□ -0.89
VTI1A-204ENST00000480057 PNLIPRP3Q17RR3 467 aa9.51□□□□□ -0.89
VTI1A-204ENST00000480057 LINC00303Q3SY05 128 aa9.51□□□□□ -0.89
VTI1A-204ENST00000480057 ZNF260Q3ZCT1 412 aa9.51□□□□□ -0.89
VTI1A-204ENST00000480057 FBXW12Q6X9E4 464 aa9.51□□□□□ -0.89
VTI1A-204ENST00000480057 SAXO1Q8IYX7 474 aa9.51□□□□□ -0.89
VTI1A-204ENST00000480057 WDR31Q8NA23 367 aa9.51□□□□□ -0.89
VTI1A-204ENST00000480057 SEH1LQ96EE3 360 aa9.51□□□□□ -0.89
VTI1A-204ENST00000480057 NKX3-1Q99801 234 aaPredicted RBP9.51□□□□□ -0.89
VTI1A-204ENST00000480057 NEURL2Q9BR09 285 aa9.51□□□□□ -0.89
VTI1A-204ENST00000480057 ACTR6Q9GZN1 396 aa9.51□□□□□ -0.89
VTI1A-204ENST00000480057 METTL9Q9H1A3 318 aa9.51□□□□□ -0.89
VTI1A-204ENST00000480057 MMP28Q9H239 520 aa9.51□□□□□ -0.89
VTI1A-204ENST00000480057 HRASLSQ9HDD0 168 aa9.51□□□□□ -0.89
VTI1A-204ENST00000480057 PTTG3PQ9NZH4 202 aa9.51□□□□□ -0.89
VTI1A-204ENST00000480057 NLKQ9UBE8 527 aa9.51□□□□□ -0.89
VTI1A-204ENST00000480057 STARD10Q9Y365 291 aa9.51□□□□□ -0.89
VTI1A-204ENST00000480057 NOP16Q9Y3C1 178 aaKnown RBP9.51□□□□□ -0.89
VTI1A-204ENST00000480057 MPC1Q9Y5U8 109 aa9.51□□□□□ -0.89
VTI1A-204ENST00000480057 APC2O95996 2303 aa9.51□□□□□ -0.89
VTI1A-204ENST00000480057 AKAP13Q12802 2813 aa9.5□□□□□ -0.89
VTI1A-204ENST00000480057 MEIOCA2RUB1 952 aa9.5□□□□□ -0.89
VTI1A-204ENST00000480057 OR5H1A6NKK0 313 aa9.5□□□□□ -0.89
VTI1A-204ENST00000480057 CD300LBA8K4G0 201 aa9.5□□□□□ -0.89
VTI1A-204ENST00000480057 PRSS44E7EML9 344 aa9.5□□□□□ -0.89
VTI1A-204ENST00000480057 AKR7A2O43488 359 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms