RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 TMEM230Q96A57 120 aa9.49□□□□□ -0.89
VPS52-217ENST00000478934 IMMP1LQ96LU5 166 aa9.49□□□□□ -0.89
VPS52-217ENST00000478934 HDHD3Q9BSH5 251 aaPredicted RBP9.49□□□□□ -0.89
VPS52-217ENST00000478934 SRXN1Q9BYN0 137 aa9.49□□□□□ -0.89
VPS52-217ENST00000478934 SLC2A8Q9NY64 477 aa9.49□□□□□ -0.89
VPS52-217ENST00000478934 OR5AC2Q9NZP5 309 aa9.49□□□□□ -0.89
VPS52-217ENST00000478934 C19orf25Q9UFG5 118 aaPredicted RBP9.49□□□□□ -0.89
VPS52-217ENST00000478934 NCOR1O75376 2440 aa9.48□□□□□ -0.89
VPS52-217ENST00000478934 OR2F2O95006 317 aa9.48□□□□□ -0.89
VPS52-217ENST00000478934 IL2RAP01589 272 aa9.48□□□□□ -0.89
VPS52-217ENST00000478934 GLRA1P23415 457 aa9.48□□□□□ -0.89
VPS52-217ENST00000478934 OR2F1Q13607 317 aa9.48□□□□□ -0.89
VPS52-217ENST00000478934 CCDC157Q569K6 752 aa9.48□□□□□ -0.89
VPS52-217ENST00000478934 ZIC4Q8N9L1 334 aa9.48□□□□□ -0.89
VPS52-217ENST00000478934 ZSCAN4Q8NAM6 433 aaPredicted RBP9.48□□□□□ -0.89
VPS52-217ENST00000478934 FBXO17Q96EF6 278 aa9.48□□□□□ -0.89
VPS52-217ENST00000478934 SLC26A1Q9H2B4 701 aa9.48□□□□□ -0.89
VPS52-217ENST00000478934 MYOZ1Q9NP98 299 aaPredicted RBP9.48□□□□□ -0.89
VPS52-217ENST00000478934 GSKIPQ9P0R6 139 aa9.48□□□□□ -0.89
VPS52-217ENST00000478934 TP53I11O14683 189 aa9.48□□□□□ -0.89
VPS52-217ENST00000478934 KNG1P01042 644 aa9.48□□□□□ -0.89
VPS52-217ENST00000478934 CRHP06850 196 aa9.48□□□□□ -0.89
VPS52-217ENST00000478934 GP1BAP07359 652 aa9.48□□□□□ -0.89
VPS52-217ENST00000478934 SLC35A1P78382 337 aa9.48□□□□□ -0.89
VPS52-217ENST00000478934 GUCA2BQ16661 112 aa9.48□□□□□ -0.89
VPS52-217ENST00000478934 PMS2CLQ68D20 193 aa9.48□□□□□ -0.89
VPS52-217ENST00000478934 BRICD5Q6PL45 260 aa9.48□□□□□ -0.89
VPS52-217ENST00000478934 HOGA1Q86XE5 327 aa9.48□□□□□ -0.89
VPS52-217ENST00000478934 PNLDC1Q8NA58 520 aaKnown RBP9.48□□□□□ -0.89
VPS52-217ENST00000478934 OR5AP2Q8NGF4 316 aa9.48□□□□□ -0.89
VPS52-217ENST00000478934 EDAQ92838 391 aa9.48□□□□□ -0.89
VPS52-217ENST00000478934 NABP1Q96AH0 204 aa9.48□□□□□ -0.89
VPS52-217ENST00000478934 RNF126Q9BV68 326 aa9.48□□□□□ -0.89
VPS52-217ENST00000478934 FAM117AQ9C073 453 aa9.48□□□□□ -0.89
VPS52-217ENST00000478934 ACKR4Q9NPB9 350 aa9.48□□□□□ -0.89
VPS52-217ENST00000478934 PIGLQ9Y2B2 252 aa9.48□□□□□ -0.89
VPS52-217ENST00000478934 HDGFL3Q9Y3E1 203 aa9.48□□□□□ -0.89
VPS52-217ENST00000478934 AHCTF1Q8WYP5 2266 aa9.48□□□□□ -0.89
VPS52-217ENST00000478934 ANGPTL7O43827 346 aa9.47□□□□□ -0.89
VPS52-217ENST00000478934 ACTL6AO96019 429 aa9.47□□□□□ -0.89
VPS52-217ENST00000478934 HOXB5P09067 269 aa9.47□□□□□ -0.89
VPS52-217ENST00000478934 SLC25A4P12235 298 aa9.47□□□□□ -0.89
VPS52-217ENST00000478934 FCGR2AP12318 317 aa9.47□□□□□ -0.89
VPS52-217ENST00000478934 LIFP15018 202 aa9.47□□□□□ -0.89
VPS52-217ENST00000478934 CTRB1P17538 263 aa9.47□□□□□ -0.89
VPS52-217ENST00000478934 ADCYAP1P18509 176 aa9.47□□□□□ -0.89
VPS52-217ENST00000478934 PSMB6P28072 239 aa9.47□□□□□ -0.89
VPS52-217ENST00000478934 HGFACQ04756 655 aa9.47□□□□□ -0.89
VPS52-217ENST00000478934 ZNF169Q14929 603 aaPredicted RBP9.47□□□□□ -0.89
VPS52-217ENST00000478934 ANKRD55Q3KP44 614 aa9.47□□□□□ -0.89
VPS52-217ENST00000478934 PLEKHN1Q494U1 663 aaPredicted RBP9.47□□□□□ -0.89
VPS52-217ENST00000478934 PAN3Q58A45 887 aaKnown RBP9.47□□□□□ -0.89
VPS52-217ENST00000478934 CTRB2Q6GPI1 263 aa9.47□□□□□ -0.89
VPS52-217ENST00000478934 DRAM2Q6UX65 266 aa9.47□□□□□ -0.89
VPS52-217ENST00000478934 CLEC18BQ6UXF7 455 aa9.47□□□□□ -0.89
VPS52-217ENST00000478934 C20orf196Q8IYI0 205 aa9.47□□□□□ -0.89
VPS52-217ENST00000478934 BATF2Q8N1L9 274 aa9.47□□□□□ -0.89
VPS52-217ENST00000478934 GTPBP8Q8N3Z3 284 aaPredicted RBP9.47□□□□□ -0.89
VPS52-217ENST00000478934 TMEM156Q8N614 296 aa9.47□□□□□ -0.89
VPS52-217ENST00000478934 ADPRHL1Q8NDY3 354 aa9.47□□□□□ -0.89
VPS52-217ENST00000478934 OR13G1Q8NGZ3 307 aa9.47□□□□□ -0.89
VPS52-217ENST00000478934 TERB2Q8NHR7 220 aa9.47□□□□□ -0.89
VPS52-217ENST00000478934 KCNG3Q8TAE7 436 aa9.47□□□□□ -0.89
VPS52-217ENST00000478934 CPNE2Q96FN4 548 aaPredicted RBP9.47□□□□□ -0.89
VPS52-217ENST00000478934 OR10C1Q96KK4 312 aa9.47□□□□□ -0.89
VPS52-217ENST00000478934 SLC39A1Q9NY26 324 aa9.47□□□□□ -0.89
VPS52-217ENST00000478934 URB1O60287 2271 aaKnown RBP9.47□□□□□ -0.89
VPS52-217ENST00000478934 NPIPA2E9PIF3 369 aa9.47□□□□□ -0.89
VPS52-217ENST00000478934 NPIPA3F8WFD2 350 aa9.47□□□□□ -0.89
VPS52-217ENST00000478934 DUS4LO95620 317 aaKnown RBP9.47□□□□□ -0.89
VPS52-217ENST00000478934 RFPL3SP0C7P2 107 aa9.47□□□□□ -0.89
VPS52-217ENST00000478934 FGF5P12034 268 aa9.47□□□□□ -0.89
VPS52-217ENST00000478934 MSR1P21757 451 aa9.47□□□□□ -0.89
VPS52-217ENST00000478934 BLVRBP30043 206 aaPredicted RBP9.47□□□□□ -0.89
VPS52-217ENST00000478934 PTGFRP43088 359 aa9.47□□□□□ -0.89
VPS52-217ENST00000478934 SUPT4H1P63272 117 aaKnown RBP9.47□□□□□ -0.89
VPS52-217ENST00000478934 DOK3Q7L591 496 aa9.47□□□□□ -0.89
VPS52-217ENST00000478934 C6orf201Q7Z4U5 140 aa9.47□□□□□ -0.89
VPS52-217ENST00000478934 ZDHHC22Q8N966 263 aa9.47□□□□□ -0.89
VPS52-217ENST00000478934 DTWD2Q8NBA8 298 aa9.47□□□□□ -0.89
VPS52-217ENST00000478934 OR9K2Q8NGE7 335 aa9.47□□□□□ -0.89
VPS52-217ENST00000478934 SSC4DQ8WTU2 575 aa9.47□□□□□ -0.89
VPS52-217ENST00000478934 ARPC5LQ9BPX5 153 aa9.47□□□□□ -0.89
VPS52-217ENST00000478934 GPR173Q9NS66 373 aa9.47□□□□□ -0.89
VPS52-217ENST00000478934 PLEK2Q9NYT0 353 aa9.47□□□□□ -0.89
VPS52-217ENST00000478934 ZNF107Q9UII5 783 aaPredicted RBP9.47□□□□□ -0.89
VPS52-217ENST00000478934 DKKL1Q9UK85 242 aa9.47□□□□□ -0.89
VPS52-217ENST00000478934 ARPC4-TTLL3A0A0A6YYG9 625 aa9.46□□□□□ -0.89
VPS52-217ENST00000478934 PCP4L1A6NKN8 68 aa9.46□□□□□ -0.89
VPS52-217ENST00000478934 MFNGO00587 321 aa9.46□□□□□ -0.89
VPS52-217ENST00000478934 ABCD4O14678 606 aa9.46□□□□□ -0.89
VPS52-217ENST00000478934 MSTNO14793 375 aa9.46□□□□□ -0.89
VPS52-217ENST00000478934 BET1O15155 118 aa9.46□□□□□ -0.89
VPS52-217ENST00000478934 ONECUT2O95948 504 aa9.46□□□□□ -0.89
VPS52-217ENST00000478934 HPNP05981 417 aa9.46□□□□□ -0.89
VPS52-217ENST00000478934 GLI4P10075 376 aa9.46□□□□□ -0.89
VPS52-217ENST00000478934 AMY2BP19961 511 aa9.46□□□□□ -0.89
VPS52-217ENST00000478934 CCL1P22362 96 aa9.46□□□□□ -0.89
VPS52-217ENST00000478934 GABRR1P24046 479 aa9.46□□□□□ -0.89
VPS52-217ENST00000478934 ACKR3P25106 362 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms