RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 ACTRT1Q8TDG2 376 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 PYROXD1Q8WU10 500 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 UCN3Q969E3 161 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 PHYHIPLQ96FC7 376 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 MED8Q96G25 268 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 TMEM101Q96IK0 257 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 PLEKHA8Q96JA3 519 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 SLC35E1Q96K37 410 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 NAT9Q9BTE0 207 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 KIFC1Q9BW19 673 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 NARFLQ9H6Q4 476 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 UGT1A7Q9HAW7 530 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 UGT1A10Q9HAW8 530 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 UGT1A8Q9HAW9 530 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 PLGRKTQ9HBL7 147 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 LZTFL1Q9NQ48 299 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 TREX1Q9NSU2 369 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 IMP3Q9NV31 184 aaKnown RBP2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 SLC7A8Q9UHI5 535 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 KALRNO60229 2985 aa2.76□□□□□ -1.97
CDC42BPA-212ENST00000478573 CNTRLQ7Z7A1 2325 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 PIEZO2Q9H5I5 2752 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 CFAP46Q8IYW2 2715 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 PTPN13Q12923 2485 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 GCN1Q92616 2671 aaKnown RBP2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 NSG1A0A0A6YYJ2 146 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 IGHV5-51A0A0C4DH38 117 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 GOLGA8OA6NCC3 632 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 ERICH4A6NGS2 130 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 GOLGA8NF8WBI6 632 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 DNALI1O14645 258 aaPredicted RBP2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 EIF3HO15372 352 aaKnown RBP eCLIP2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 EMC8O43402 210 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 KLHL41O60662 606 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 CIB2O75838 187 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 C1orf105O95561 183 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 TTC4O95801 387 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 FAM107AO95990 144 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 CST1P01037 141 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 IGLV1-47P01700 117 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 KRT14P02533 472 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 HPNP05981 417 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 MPC1LP0DKB6 136 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 ZNF19P17023 458 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 KITLGP21583 273 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 CD9P21926 228 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 CD1BP29016 333 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 HSD17B2P37059 387 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 COILP38432 576 aaPredicted RBP2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 GABRA4P48169 554 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 GSSP48637 474 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 TAS2R19P59542 299 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 PPP1CAP62136 330 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 GNB2P62879 340 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 ERVK-25P63136 954 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 TGFBR3Q03167 851 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 ARHGAP19Q14CB8 494 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 NSDHLQ15738 373 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 TTLL9Q3SXZ7 439 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 SPESP1Q6UW49 350 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 Q6ZN92 141 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 TMEM135Q86UB9 458 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 ZNF546Q86UE3 836 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 IFT20Q8IY31 132 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 C10orf67Q8IYJ2 551 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 IQCKQ8N0W5 287 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 PRELID2Q8N945 189 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 ACOT4Q8N9L9 421 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 FNDC5Q8NAU1 212 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 ZNF740Q8NDX6 193 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 SDR9C7Q8NEX9 313 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 OR4F6Q8NGB9 312 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 OR2L8Q8NGY9 312 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 LKAAEAR1Q8TD35 194 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 C1orf54Q8WWF1 131 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 ASZ1Q8WWH4 475 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 ACOT11Q8WXI4 607 aaPredicted RBP2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 STARD8Q92502 1023 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 ELMO1Q92556 727 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 TFGQ92734 400 aaPredicted RBP2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 LRRC39Q96DD0 335 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 FOPNLQ96NB1 174 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 SERPINB12Q96P63 405 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 IP6K3Q96PC2 410 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 NRIP2Q9BQI9 281 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 ULBP3Q9BZM4 244 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 ACTR6Q9GZN1 396 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 MFFQ9GZY8 342 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 SRMSQ9H3Y6 488 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 LHX9Q9NQ69 397 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 PLSCR3Q9NRY6 295 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 SLC2A8Q9NY64 477 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 KCNIP1Q9NZI2 227 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 PCYOX1Q9UHG3 505 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 SNX12Q9UMY4 172 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 PSMD13Q9UNM6 376 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 CELSR3Q9NYQ7 3312 aa2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 HELZ2Q9BYK8 2649 aaKnown RBP2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 UBR5O95071 2799 aaPredicted RBP2.75□□□□□ -1.97
CDC42BPA-212ENST00000478573 DNAJC13O75165 2243 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms