RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 ZNF813Q6ZN06 617 aa5.47□□□□□ -1.53
CLDN4-205ENST00000476494 SSX6Q7RTT6 188 aa5.47□□□□□ -1.53
CLDN4-205ENST00000476494 SLC16A14Q7RTX9 510 aa5.47□□□□□ -1.53
CLDN4-205ENST00000476494 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.47□□□□□ -1.53
CLDN4-205ENST00000476494 ZNF433Q8N7K0 673 aaPredicted RBP5.47□□□□□ -1.53
CLDN4-205ENST00000476494 CCDC54Q8NEL0 328 aa5.47□□□□□ -1.53
CLDN4-205ENST00000476494 RPS4Y2Q8TD47 263 aa5.47□□□□□ -1.53
CLDN4-205ENST00000476494 UBASH3BQ8TF42 649 aa5.47□□□□□ -1.53
CLDN4-205ENST00000476494 GHSRQ92847 366 aa5.47□□□□□ -1.53
CLDN4-205ENST00000476494 SPTSSAQ969W0 71 aa5.47□□□□□ -1.53
CLDN4-205ENST00000476494 SMIM19Q96E16 107 aa5.47□□□□□ -1.53
CLDN4-205ENST00000476494 MAP6Q96JE9 813 aa5.47□□□□□ -1.53
CLDN4-205ENST00000476494 ALKBH3Q96Q83 286 aaPredicted RBP5.47□□□□□ -1.53
CLDN4-205ENST00000476494 DCLRE1CQ96SD1 692 aaKnown RBP5.47□□□□□ -1.53
CLDN4-205ENST00000476494 KCNJ15Q99712 375 aa5.47□□□□□ -1.53
CLDN4-205ENST00000476494 COMMD4Q9H0A8 199 aa5.47□□□□□ -1.53
CLDN4-205ENST00000476494 EMC7Q9NPA0 242 aa5.47□□□□□ -1.53
CLDN4-205ENST00000476494 OBP2BQ9NPH6 170 aa5.47□□□□□ -1.53
CLDN4-205ENST00000476494 CENPMQ9NSP4 180 aa5.47□□□□□ -1.53
CLDN4-205ENST00000476494 ACOXLQ9NUZ1 547 aa5.47□□□□□ -1.53
CLDN4-205ENST00000476494 SLCO1C1Q9NYB5 712 aa5.47□□□□□ -1.53
CLDN4-205ENST00000476494 C1RLQ9NZP8 487 aa5.47□□□□□ -1.53
CLDN4-205ENST00000476494 PRSS50Q9UI38 385 aa5.47□□□□□ -1.53
CLDN4-205ENST00000476494 KLHDC2Q9Y2U9 406 aa5.47□□□□□ -1.53
CLDN4-205ENST00000476494 SF3B6Q9Y3B4 125 aaKnown RBP5.47□□□□□ -1.53
CLDN4-205ENST00000476494 ATP23Q9Y6H3 246 aa5.47□□□□□ -1.53
CLDN4-205ENST00000476494 R4GMQ9 66 aa5.47□□□□□ -1.53
CLDN4-205ENST00000476494 TET2Q6N021 2002 aaPredicted RBP5.47□□□□□ -1.53
CLDN4-205ENST00000476494 TMEM269A0A1B0GVZ9 245 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 FAM181BA6NEQ2 426 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 OR6C6A6NF89 314 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 ZNF879B4DU55 563 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 E9PI62 339 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 LOC110117498-PIK3R3F6TDL0 507 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 H3BMQ9 156 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 SGCEO43556 437 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 TMEM127O75204 238 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 ARL6IP5O75915 188 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 NDUFA7O95182 113 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 LALBAP00709 142 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 B4GALT1P15291 398 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 ZNF12P17014 697 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 GADD45AP24522 165 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 MAPK3P27361 379 aaPredicted RBP5.46□□□□□ -1.54
CLDN4-205ENST00000476494 HSD11B1P28845 292 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 SERPINF1P36955 418 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 CRYBB2P43320 205 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 GDI2P50395 445 aaKnown RBP5.46□□□□□ -1.54
CLDN4-205ENST00000476494 TPTEP56180 551 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 PSMA6P60900 246 aaKnown RBP5.46□□□□□ -1.54
CLDN4-205ENST00000476494 PLP2Q04941 152 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 SLC3A1Q07837 685 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 DBPQ10586 325 aaPredicted RBP5.46□□□□□ -1.54
CLDN4-205ENST00000476494 EFNB3Q15768 340 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 CNPY1Q3B7I2 92 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 TMEM244Q5VVB8 128 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 FOXB2Q5VYV0 432 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 ARL9Q6T311 187 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 DRAM2Q6UX65 266 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 LRRN1Q6UXK5 716 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 RBMS3Q6XE24 437 aaKnown RBP5.46□□□□□ -1.54
CLDN4-205ENST00000476494 CFAP77Q6ZQR2 320 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 SLC16A12Q6ZSM3 486 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 SPATC1Q76KD6 591 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 LINGO2Q7L985 606 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 LINC00346Q8IVM7 164 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 SKA3Q8IX90 412 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 LRRC18Q8N456 261 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 C17orf78Q8N4C9 275 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 OR52H1Q8NGJ2 320 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 OR1K1Q8NGR3 316 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 OR2G2Q8NGZ5 317 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 OR5AK2Q8NH90 309 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 OR1F12Q8NHA8 337 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 ABHD4Q8TB40 342 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 NEU4Q8WWR8 484 aaPredicted RBP5.46□□□□□ -1.54
CLDN4-205ENST00000476494 BCL2L2Q92843 193 aaPredicted RBP5.46□□□□□ -1.54
CLDN4-205ENST00000476494 C12orf43Q96C57 262 aaKnown RBP5.46□□□□□ -1.54
CLDN4-205ENST00000476494 ZNF837Q96EG3 531 aaPredicted RBP5.46□□□□□ -1.54
CLDN4-205ENST00000476494 C4orf45Q96LM5 186 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 KCTD7Q96MP8 289 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 AMELYQ99218 206 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 ATF6BQ99941 703 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 RAB1BQ9H0U4 201 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 PNRC2Q9NPJ4 139 aaKnown RBP5.46□□□□□ -1.54
CLDN4-205ENST00000476494 PLEK2Q9NYT0 353 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 PTTG2Q9NZH5 202 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 FRRS1LQ9P0K9 344 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 ZNF391Q9UJN7 358 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 LRP12Q9Y561 859 aa5.46□□□□□ -1.54
CLDN4-205ENST00000476494 STARD9Q9P2P6 4700 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 CIB4A0PJX0 185 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 OR4C45A6NMZ5 311 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 PRR32B1ATL7 298 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 B9A039 149 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 ATP6V1G2-DDX39BF2Z307 99 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 RER1O15258 196 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 SRSF10O75494 262 aaKnown RBP5.45□□□□□ -1.54
CLDN4-205ENST00000476494 GPX5O75715 221 aa5.45□□□□□ -1.54
CLDN4-205ENST00000476494 RPP14O95059 124 aaKnown RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms