RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 WDR82Q6UXN9 313 aa9.48□□□□□ -0.89
NUDCD3-206ENST00000475952 ZNF841Q6ZN19 808 aa9.48□□□□□ -0.89
NUDCD3-206ENST00000475952 KCTD8Q6ZWB6 473 aa9.48□□□□□ -0.89
NUDCD3-206ENST00000475952 ASRGL1Q7L266 308 aa9.48□□□□□ -0.89
NUDCD3-206ENST00000475952 FAM90A1Q86YD7 464 aa9.48□□□□□ -0.89
NUDCD3-206ENST00000475952 SLC35F2Q8IXU6 374 aa9.48□□□□□ -0.89
NUDCD3-206ENST00000475952 PIGCQ92535 297 aa9.48□□□□□ -0.89
NUDCD3-206ENST00000475952 DACT3Q96B18 629 aaPredicted RBP9.48□□□□□ -0.89
NUDCD3-206ENST00000475952 UPRTQ96BW1 309 aa9.48□□□□□ -0.89
NUDCD3-206ENST00000475952 HIST1H2AAQ96QV6 131 aa9.48□□□□□ -0.89
NUDCD3-206ENST00000475952 PKP2Q99959 881 aa9.48□□□□□ -0.89
NUDCD3-206ENST00000475952 RBM4BQ9BQ04 359 aaKnown RBP9.48□□□□□ -0.89
NUDCD3-206ENST00000475952 GABARAPL3Q9BY60 117 aa9.48□□□□□ -0.89
NUDCD3-206ENST00000475952 PBOV1Q9GZY1 135 aa9.48□□□□□ -0.89
NUDCD3-206ENST00000475952 TLNRD1Q9H1K6 362 aa9.48□□□□□ -0.89
NUDCD3-206ENST00000475952 RIBC2Q9H4K1 309 aa9.48□□□□□ -0.89
NUDCD3-206ENST00000475952 ADGRL4Q9HBW9 690 aa9.48□□□□□ -0.89
NUDCD3-206ENST00000475952 HAO2Q9NYQ3 351 aa9.48□□□□□ -0.89
NUDCD3-206ENST00000475952 CTSZQ9UBR2 303 aa9.48□□□□□ -0.89
NUDCD3-206ENST00000475952 COPS3Q9UNS2 423 aa9.48□□□□□ -0.89
NUDCD3-206ENST00000475952 ORC6Q9Y5N6 252 aa9.48□□□□□ -0.89
NUDCD3-206ENST00000475952 NOTCH1P46531 2555 aa9.47□□□□□ -0.89
NUDCD3-206ENST00000475952 SAC3D1A6NKF1 404 aa9.47□□□□□ -0.89
NUDCD3-206ENST00000475952 SRRM5B3KS81 715 aa9.47□□□□□ -0.89
NUDCD3-206ENST00000475952 LOC110117498-PIK3R3F6TDL0 507 aa9.47□□□□□ -0.89
NUDCD3-206ENST00000475952 CDIPTO14735 213 aa9.47□□□□□ -0.89
NUDCD3-206ENST00000475952 TMPRSS2O15393 492 aa9.47□□□□□ -0.89
NUDCD3-206ENST00000475952 MTRF1O75570 445 aaKnown RBP9.47□□□□□ -0.89
NUDCD3-206ENST00000475952 GYPAP02724 150 aa9.47□□□□□ -0.89
NUDCD3-206ENST00000475952 LIPFP07098 398 aa9.47□□□□□ -0.89
NUDCD3-206ENST00000475952 ATP6V1B1P15313 513 aa9.47□□□□□ -0.89
NUDCD3-206ENST00000475952 EGR3Q06889 387 aa9.47□□□□□ -0.89
NUDCD3-206ENST00000475952 POU4F2Q12837 409 aa9.47□□□□□ -0.89
NUDCD3-206ENST00000475952 KLF17Q5JT82 389 aaPredicted RBP9.47□□□□□ -0.89
NUDCD3-206ENST00000475952 ZFP1Q6P2D0 407 aa9.47□□□□□ -0.89
NUDCD3-206ENST00000475952 SLC36A1Q7Z2H8 476 aa9.47□□□□□ -0.89
NUDCD3-206ENST00000475952 BCDIN3DQ7Z5W3 292 aaKnown RBP9.47□□□□□ -0.89
NUDCD3-206ENST00000475952 THAP5Q7Z6K1 395 aa9.47□□□□□ -0.89
NUDCD3-206ENST00000475952 C11orf53Q8IXP5 236 aa9.47□□□□□ -0.89
NUDCD3-206ENST00000475952 PNLDC1Q8NA58 520 aaKnown RBP9.47□□□□□ -0.89
NUDCD3-206ENST00000475952 OR51G2Q8NGK0 314 aa9.47□□□□□ -0.89
NUDCD3-206ENST00000475952 OR10Z1Q8NGY1 313 aa9.47□□□□□ -0.89
NUDCD3-206ENST00000475952 SGMS2Q8NHU3 365 aa9.47□□□□□ -0.89
NUDCD3-206ENST00000475952 FAM216AQ8WUB2 273 aa9.47□□□□□ -0.89
NUDCD3-206ENST00000475952 PYDC1Q8WXC3 89 aa9.47□□□□□ -0.89
NUDCD3-206ENST00000475952 OR5P3Q8WZ94 311 aa9.47□□□□□ -0.89
NUDCD3-206ENST00000475952 C12orf43Q96C57 262 aaKnown RBP9.47□□□□□ -0.89
NUDCD3-206ENST00000475952 LYZL4Q96KX0 146 aa9.47□□□□□ -0.89
NUDCD3-206ENST00000475952 IL4I1Q96RQ9 567 aa9.47□□□□□ -0.89
NUDCD3-206ENST00000475952 MS4A7Q9GZW8 240 aaPredicted RBP9.47□□□□□ -0.89
NUDCD3-206ENST00000475952 ZMAT3Q9HA38 289 aaKnown RBP9.47□□□□□ -0.89
NUDCD3-206ENST00000475952 GPR84Q9NQS5 396 aa9.47□□□□□ -0.89
NUDCD3-206ENST00000475952 CLN6Q9NWW5 311 aa9.47□□□□□ -0.89
NUDCD3-206ENST00000475952 KAAG1Q9UBP8 84 aa9.47□□□□□ -0.89
NUDCD3-206ENST00000475952 WARS2Q9UGM6 360 aaKnown RBP9.47□□□□□ -0.89
NUDCD3-206ENST00000475952 NUFIP1Q9UHK0 495 aaKnown RBP9.47□□□□□ -0.89
NUDCD3-206ENST00000475952 GTF2A1LQ9UNN4 478 aa9.47□□□□□ -0.89
NUDCD3-206ENST00000475952 IGHV3OR15-7A0A075B7D8 119 aa9.46□□□□□ -0.9
NUDCD3-206ENST00000475952 OR5B21A6NL26 309 aa9.46□□□□□ -0.9
NUDCD3-206ENST00000475952 PRR32B1ATL7 298 aa9.46□□□□□ -0.9
NUDCD3-206ENST00000475952 C22orf46C9J442 243 aa9.46□□□□□ -0.9
NUDCD3-206ENST00000475952 DHRS3O75911 302 aa9.46□□□□□ -0.9
NUDCD3-206ENST00000475952 ECDO95905 644 aaPredicted RBP9.46□□□□□ -0.9
NUDCD3-206ENST00000475952 KRT8P05787 483 aa9.46□□□□□ -0.9
NUDCD3-206ENST00000475952 IGHV4-38-2P0DP08 117 aa9.46□□□□□ -0.9
NUDCD3-206ENST00000475952 MTNR1AP48039 350 aa9.46□□□□□ -0.9
NUDCD3-206ENST00000475952 CDC42P60953 191 aa9.46□□□□□ -0.9
NUDCD3-206ENST00000475952 EFNB1P98172 346 aa9.46□□□□□ -0.9
NUDCD3-206ENST00000475952 RIPPLY1Q0D2K3 151 aa9.46□□□□□ -0.9
NUDCD3-206ENST00000475952 C11orf91Q3C1V1 193 aa9.46□□□□□ -0.9
NUDCD3-206ENST00000475952 PDLIM3Q53GG5 364 aaPredicted RBP9.46□□□□□ -0.9
NUDCD3-206ENST00000475952 BCL2L15Q5TBC7 163 aa9.46□□□□□ -0.9
NUDCD3-206ENST00000475952 ZBTB37Q5TC79 503 aa9.46□□□□□ -0.9
NUDCD3-206ENST00000475952 DOK3Q7L591 496 aa9.46□□□□□ -0.9
NUDCD3-206ENST00000475952 C10orf67Q8IYJ2 551 aa9.46□□□□□ -0.9
NUDCD3-206ENST00000475952 SIGLECL1Q8N7X8 197 aa9.46□□□□□ -0.9
NUDCD3-206ENST00000475952 OR8J1Q8NGP2 316 aa9.46□□□□□ -0.9
NUDCD3-206ENST00000475952 HPSE2Q8WWQ2 592 aa9.46□□□□□ -0.9
NUDCD3-206ENST00000475952 ST8SIA4Q92187 359 aa9.46□□□□□ -0.9
NUDCD3-206ENST00000475952 RPL3LQ92901 407 aaKnown RBP9.46□□□□□ -0.9
NUDCD3-206ENST00000475952 RFKQ969G6 155 aa9.46□□□□□ -0.9
NUDCD3-206ENST00000475952 RNF170Q96K19 258 aa9.46□□□□□ -0.9
NUDCD3-206ENST00000475952 FAM71F1Q96KD3 344 aaPredicted RBP9.46□□□□□ -0.9
NUDCD3-206ENST00000475952 PPP1R3EQ9H7J1 279 aa9.46□□□□□ -0.9
NUDCD3-206ENST00000475952 SMURF1Q9HCE7 757 aa9.46□□□□□ -0.9
NUDCD3-206ENST00000475952 DNAJB11Q9UBS4 358 aa9.46□□□□□ -0.9
NUDCD3-206ENST00000475952 ZNF69Q9UC07 566 aa9.46□□□□□ -0.9
NUDCD3-206ENST00000475952 ENPP5Q9UJA9 477 aa9.46□□□□□ -0.9
NUDCD3-206ENST00000475952 R4GMQ9 66 aa9.46□□□□□ -0.9
NUDCD3-206ENST00000475952 NKX6-3A6NJ46 265 aa9.45□□□□□ -0.9
NUDCD3-206ENST00000475952 ZNF879B4DU55 563 aa9.45□□□□□ -0.9
NUDCD3-206ENST00000475952 DVL1O14640 695 aa9.45□□□□□ -0.9
NUDCD3-206ENST00000475952 TNFRSF13BO14836 293 aaPredicted RBP9.45□□□□□ -0.9
NUDCD3-206ENST00000475952 PLATP00750 562 aa9.45□□□□□ -0.9
NUDCD3-206ENST00000475952 IGLV3-1P01715 115 aa9.45□□□□□ -0.9
NUDCD3-206ENST00000475952 HTR1FP30939 366 aa9.45□□□□□ -0.9
NUDCD3-206ENST00000475952 CFHR2P36980 270 aa9.45□□□□□ -0.9
NUDCD3-206ENST00000475952 COMPP49747 757 aaPredicted RBP9.45□□□□□ -0.9
NUDCD3-206ENST00000475952 GPM6AP51674 278 aa9.45□□□□□ -0.9
NUDCD3-206ENST00000475952 FGF12P61328 243 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms