RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 TMEM56Q96MV1 263 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 VSTM2LQ96N03 204 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 SULT4A1Q9BR01 284 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 TINF2Q9BSI4 451 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 STRADBQ9C0K7 418 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 TAF9BQ9HBM6 251 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 P4HTMQ9NXG6 502 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 FBXL17Q9UF56 701 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 ZNF835Q9Y2P0 537 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 TMEM56-RWDD3S4R434 201 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 UBE2QL1A1L167 161 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 CDC14CA4D256 554 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 CPSF4LA6NMK7 179 aaKnown RBP3.58□□□□□ -1.84
USP16-205ENST00000474835 FTCDNL1E5RQL4 147 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 ZNF587BE7ETH6 402 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 TGFBR3LH3BV60 316 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 DXOO77932 396 aaKnown RBP3.58□□□□□ -1.84
USP16-205ENST00000474835 NXPH2O95156 264 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 WISP1O95388 367 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 ERCC1P07992 297 aaPredicted RBP3.58□□□□□ -1.84
USP16-205ENST00000474835 POU2F2P09086 479 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 SLC25A6P12236 298 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 IRF2P14316 349 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 GDF1P27539 372 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 CORO1AP31146 461 aaKnown RBP3.58□□□□□ -1.84
USP16-205ENST00000474835 EFEMP1Q12805 493 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 ZP4Q12836 540 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 RAB32Q13637 225 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 SMCO1Q147U7 214 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 CCDC85BQ15834 202 aaPredicted RBP3.58□□□□□ -1.84
USP16-205ENST00000474835 ZNF74Q16587 644 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 ACTBL2Q562R1 376 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 ZNF697Q5TEC3 545 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 FAM46CQ5VWP2 391 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 ZNF343Q6P1L6 599 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 C22orf39Q6P5X5 142 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 DEGS2Q6QHC5 323 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 TMCO2Q7Z6W1 182 aaPredicted RBP3.58□□□□□ -1.84
USP16-205ENST00000474835 SHISA5Q8N114 240 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 OR2I1PQ8NGU4 316 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 TERB2Q8NHR7 220 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 TRIM43Q96BQ3 446 aaPredicted RBP3.58□□□□□ -1.84
USP16-205ENST00000474835 PAWRQ96IZ0 340 aaKnown RBP3.58□□□□□ -1.84
USP16-205ENST00000474835 JSRP1Q96MG2 331 aaPredicted RBP3.58□□□□□ -1.84
USP16-205ENST00000474835 TNFRSF13CQ96RJ3 184 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 PHB2Q99623 299 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 MCHR1Q99705 422 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 NRTNQ99748 197 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 SLC25A18Q9H1K4 315 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 EXO5Q9H790 373 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 B4GALT6Q9UBX8 382 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 NOD1Q9Y239 953 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 PXMP4Q9Y6I8 212 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 KIAA2026Q5HYC2 2103 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 ZFP92A6NM28 416 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 NUPR1O60356 82 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 LILRA1O75019 489 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 HLA-AP01891 365 aaKnown RBP3.58□□□□□ -1.84
USP16-205ENST00000474835 MBPP02686 304 aaPredicted RBP3.58□□□□□ -1.84
USP16-205ENST00000474835 TRGC2P03986 189 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 TCN2P20062 427 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 FUT3P21217 361 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 CD70P32970 193 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 PPP1CCP36873 323 aaKnown RBP3.58□□□□□ -1.84
USP16-205ENST00000474835 CSNK1A1P48729 337 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 PNRC1Q12796 327 aaPredicted RBP3.58□□□□□ -1.84
USP16-205ENST00000474835 PDLIM3Q53GG5 364 aaPredicted RBP3.58□□□□□ -1.84
USP16-205ENST00000474835 EIPR1Q53HC9 387 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 NMSQ5H8A3 153 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 UNQ6126/PRO20091Q6UXV3 157 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 NUFIP2Q7Z417 695 aaKnown RBP3.58□□□□□ -1.84
USP16-205ENST00000474835 UBALD2Q8IYN6 164 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 SLC16A11Q8NCK7 471 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 OR5T3Q8NGG3 340 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 OR2L8Q8NGY9 312 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 WFDC12Q8WWY7 111 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 FBXO32Q969P5 355 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 C3orf49Q96BT1 292 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 CMBLQ96DG6 245 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 SMAD5Q99717 465 aaKnown RBP3.58□□□□□ -1.84
USP16-205ENST00000474835 RARRES2Q99969 163 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 MICU1Q9BPX6 476 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 ABHD14AQ9BUJ0 271 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 RBKSQ9H477 322 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 CRLF2Q9HC73 371 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 LYRM4Q9HD34 91 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 SLC45A2Q9UMX9 530 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 HCFC2Q9Y5Z7 792 aa3.58□□□□□ -1.84
USP16-205ENST00000474835 DYSFO75923 2080 aa3.57□□□□□ -1.84
USP16-205ENST00000474835 TET1Q8NFU7 2136 aa3.57□□□□□ -1.84
USP16-205ENST00000474835 CASTOR2A6NHX0 329 aa3.57□□□□□ -1.84
USP16-205ENST00000474835 PMS2P5A8MQ11 134 aa3.57□□□□□ -1.84
USP16-205ENST00000474835 ZNF705EA8MWA4 302 aaPredicted RBP3.57□□□□□ -1.84
USP16-205ENST00000474835 ADM5C9JUS6 153 aa3.57□□□□□ -1.84
USP16-205ENST00000474835 CCSO14618 274 aa3.57□□□□□ -1.84
USP16-205ENST00000474835 HS3ST1O14792 307 aa3.57□□□□□ -1.84
USP16-205ENST00000474835 FRS3O43559 492 aa3.57□□□□□ -1.84
USP16-205ENST00000474835 RAB3DO95716 219 aa3.57□□□□□ -1.84
USP16-205ENST00000474835 TMEM50AO95807 157 aa3.57□□□□□ -1.84
USP16-205ENST00000474835 OPN1LWP04000 364 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms