RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 SUMF2Q8NBJ7 301 aa16.47■□□□□ 0.23
ECHDC1-214ENST00000474289 OR14C36Q8NHC7 312 aa16.47■□□□□ 0.23
ECHDC1-214ENST00000474289 RNASE11Q8TAA1 199 aaKnown RBP16.47■□□□□ 0.23
ECHDC1-214ENST00000474289 DGAT2Q96PD7 388 aa16.47■□□□□ 0.23
ECHDC1-214ENST00000474289 RARRES2Q99969 163 aa16.47■□□□□ 0.23
ECHDC1-214ENST00000474289 BANF2Q9H503 90 aa16.47■□□□□ 0.23
ECHDC1-214ENST00000474289 TRAV36DV7A0A075B6V5 113 aa16.46■□□□□ 0.23
ECHDC1-214ENST00000474289 ZNF587BE7ETH6 402 aa16.46■□□□□ 0.23
ECHDC1-214ENST00000474289 PPP1R2P9O14990 202 aa16.46■□□□□ 0.23
ECHDC1-214ENST00000474289 SCGB1D2O95969 90 aa16.46■□□□□ 0.23
ECHDC1-214ENST00000474289 GNRH1P01148 92 aa16.46■□□□□ 0.23
ECHDC1-214ENST00000474289 CXCR1P25024 350 aa16.46■□□□□ 0.23
ECHDC1-214ENST00000474289 RBMXP38159 391 aaKnown RBP16.46■□□□□ 0.23
ECHDC1-214ENST00000474289 OR3A2P47893 321 aa16.46■□□□□ 0.23
ECHDC1-214ENST00000474289 SUCLG1P53597 346 aaKnown RBP16.46■□□□□ 0.23
ECHDC1-214ENST00000474289 GLIPR1L1Q6UWM5 242 aa16.46■□□□□ 0.23
ECHDC1-214ENST00000474289 SPPL3Q8TCT6 385 aa16.46■□□□□ 0.23
ECHDC1-214ENST00000474289 OR1E3Q8WZA6 343 aa16.46■□□□□ 0.23
ECHDC1-214ENST00000474289 ELSPBP1Q96BH3 223 aa16.46■□□□□ 0.23
ECHDC1-214ENST00000474289 ARHGAP5-AS1Q96IT6 56 aa16.46■□□□□ 0.23
ECHDC1-214ENST00000474289 SSX3Q99909 188 aa16.46■□□□□ 0.23
ECHDC1-214ENST00000474289 CCDC3Q9BQI4 270 aa16.46■□□□□ 0.23
ECHDC1-214ENST00000474289 GINS3Q9BRX5 216 aa16.46■□□□□ 0.23
ECHDC1-214ENST00000474289 ST6GALNAC5Q9BVH7 336 aa16.46■□□□□ 0.23
ECHDC1-214ENST00000474289 BCO1Q9HAY6 547 aa16.46■□□□□ 0.23
ECHDC1-214ENST00000474289 EHFQ9NZC4 300 aa16.46■□□□□ 0.23
ECHDC1-214ENST00000474289 CHD9Q3L8U1 2897 aa16.46■□□□□ 0.23
ECHDC1-214ENST00000474289 A0A1W2PP11 408 aa16.46■□□□□ 0.23
ECHDC1-214ENST00000474289 A8MVM7 634 aa16.46■□□□□ 0.23
ECHDC1-214ENST00000474289 TSTD3H0UI37 97 aa16.46■□□□□ 0.23
ECHDC1-214ENST00000474289 FKTNO75072 461 aa16.46■□□□□ 0.23
ECHDC1-214ENST00000474289 TTRP02766 147 aa16.46■□□□□ 0.23
ECHDC1-214ENST00000474289 DEFB110Q30KQ9 67 aa16.46■□□□□ 0.23
ECHDC1-214ENST00000474289 BEND4Q6ZU67 534 aa16.46■□□□□ 0.23
ECHDC1-214ENST00000474289 GALNTL5Q7Z4T8 443 aa16.46■□□□□ 0.23
ECHDC1-214ENST00000474289 ZNF296Q8WUU4 475 aaPredicted RBP16.46■□□□□ 0.23
ECHDC1-214ENST00000474289 EMG1Q92979 244 aaKnown RBP16.46■□□□□ 0.23
ECHDC1-214ENST00000474289 C1orf147Q96MC9 270 aaPredicted RBP16.46■□□□□ 0.23
ECHDC1-214ENST00000474289 RTN4RQ9BZR6 473 aa16.46■□□□□ 0.23
ECHDC1-214ENST00000474289 PLEKHA2Q9HB19 425 aa16.46■□□□□ 0.23
ECHDC1-214ENST00000474289 CENPMQ9NSP4 180 aa16.46■□□□□ 0.23
ECHDC1-214ENST00000474289 SRPK3Q9UPE1 567 aa16.46■□□□□ 0.23
ECHDC1-214ENST00000474289 TMED3Q9Y3Q3 217 aa16.46■□□□□ 0.23
ECHDC1-214ENST00000474289 CLDN16Q9Y5I7 305 aa16.46■□□□□ 0.23
ECHDC1-214ENST00000474289 SYT7O43581 403 aa16.45■□□□□ 0.22
ECHDC1-214ENST00000474289 IFNA10P01566 189 aa16.45■□□□□ 0.22
ECHDC1-214ENST00000474289 C5AR1P21730 350 aa16.45■□□□□ 0.22
ECHDC1-214ENST00000474289 HSD11B2P80365 405 aa16.45■□□□□ 0.22
ECHDC1-214ENST00000474289 FUT7Q11130 342 aa16.45■□□□□ 0.22
ECHDC1-214ENST00000474289 SLC26A10Q8NG04 563 aa16.45■□□□□ 0.22
ECHDC1-214ENST00000474289 OR5D14Q8NGL3 314 aa16.45■□□□□ 0.22
ECHDC1-214ENST00000474289 MFSD8Q8NHS3 518 aa16.45■□□□□ 0.22
ECHDC1-214ENST00000474289 CAPNS2Q96L46 248 aa16.45■□□□□ 0.22
ECHDC1-214ENST00000474289 URGCP-MRPS24S4R325 110 aa16.45■□□□□ 0.22
ECHDC1-214ENST00000474289 CDC14BO60729 498 aa16.45■□□□□ 0.22
ECHDC1-214ENST00000474289 ZNF823P16415 610 aa16.45■□□□□ 0.22
ECHDC1-214ENST00000474289 SERPINA2P20848 420 aa16.45■□□□□ 0.22
ECHDC1-214ENST00000474289 P2RY1P47900 373 aa16.45■□□□□ 0.22
ECHDC1-214ENST00000474289 ERVFRD-1P60508 538 aa16.45■□□□□ 0.22
ECHDC1-214ENST00000474289 SPCS3P61009 180 aa16.45■□□□□ 0.22
ECHDC1-214ENST00000474289 ARFRP1Q13795 201 aa16.45■□□□□ 0.22
ECHDC1-214ENST00000474289 DNLZQ5SXM8 178 aa16.45■□□□□ 0.22
ECHDC1-214ENST00000474289 MISP3Q96FF7 219 aa16.45■□□□□ 0.22
ECHDC1-214ENST00000474289 PCNX3Q9H6A9 2034 aa16.45■□□□□ 0.22
ECHDC1-214ENST00000474289 BORCS7-ASMTA0A0B4J1R7 106 aa16.44■□□□□ 0.22
ECHDC1-214ENST00000474289 OR5H15A6NDH6 313 aa16.44■□□□□ 0.22
ECHDC1-214ENST00000474289 OR5H1A6NKK0 313 aa16.44■□□□□ 0.22
ECHDC1-214ENST00000474289 UTS2O95399 124 aa16.44■□□□□ 0.22
ECHDC1-214ENST00000474289 MMP16P51512 607 aa16.44■□□□□ 0.22
ECHDC1-214ENST00000474289 CSNK2A1P68400 391 aaPredicted RBP16.44■□□□□ 0.22
ECHDC1-214ENST00000474289 FMODQ06828 376 aa16.44■□□□□ 0.22
ECHDC1-214ENST00000474289 UBE2V2Q15819 145 aa16.44■□□□□ 0.22
ECHDC1-214ENST00000474289 GGNBP1Q5YKI7 109 aa16.44■□□□□ 0.22
ECHDC1-214ENST00000474289 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.44■□□□□ 0.22
ECHDC1-214ENST00000474289 LRRC18Q8N456 261 aa16.44■□□□□ 0.22
ECHDC1-214ENST00000474289 CSNK2A3Q8NEV1 391 aa16.44■□□□□ 0.22
ECHDC1-214ENST00000474289 MRPL24Q96A35 216 aaKnown RBP16.44■□□□□ 0.22
ECHDC1-214ENST00000474289 RAB39BQ96DA2 213 aa16.44■□□□□ 0.22
ECHDC1-214ENST00000474289 TMEM59Q9BXS4 323 aa16.44■□□□□ 0.22
ECHDC1-214ENST00000474289 SMOC1Q9H4F8 434 aa16.44■□□□□ 0.22
ECHDC1-214ENST00000474289 FAM206AQ9NX38 181 aa16.44■□□□□ 0.22
ECHDC1-214ENST00000474289 MRPS28Q9Y2Q9 187 aaKnown RBP16.44■□□□□ 0.22
ECHDC1-214ENST00000474289 STRAPQ9Y3F4 350 aaKnown RBP16.44■□□□□ 0.22
ECHDC1-214ENST00000474289 HS3ST3B1Q9Y662 390 aa16.44■□□□□ 0.22
ECHDC1-214ENST00000474289 REV3LO60673 3130 aa16.44■□□□□ 0.22
ECHDC1-214ENST00000474289 PHF3Q92576 2039 aaKnown RBP16.44■□□□□ 0.22
ECHDC1-214ENST00000474289 H2BFMP0C1H6 154 aa16.44■□□□□ 0.22
ECHDC1-214ENST00000474289 GJA4P35212 333 aa16.44■□□□□ 0.22
ECHDC1-214ENST00000474289 SNU13P55769 128 aaKnown RBP16.44■□□□□ 0.22
ECHDC1-214ENST00000474289 PPP1CAP62136 330 aa16.44■□□□□ 0.22
ECHDC1-214ENST00000474289 FOXK1P85037 733 aa16.44■□□□□ 0.22
ECHDC1-214ENST00000474289 ZNF117Q03924 483 aa16.44■□□□□ 0.22
ECHDC1-214ENST00000474289 HPSE2Q8WWQ2 592 aa16.44■□□□□ 0.22
ECHDC1-214ENST00000474289 NELFAQ9H3P2 528 aa16.44■□□□□ 0.22
ECHDC1-214ENST00000474289 C14orf166Q9Y224 244 aaKnown RBP16.44■□□□□ 0.22
ECHDC1-214ENST00000474289 A0A1B0GW64 132 aa16.43■□□□□ 0.22
ECHDC1-214ENST00000474289 METTL12A8MUP2 240 aa16.43■□□□□ 0.22
ECHDC1-214ENST00000474289 H0Y8X5 98 aa16.43■□□□□ 0.22
ECHDC1-214ENST00000474289 H3BQ15 152 aa16.43■□□□□ 0.22
ECHDC1-214ENST00000474289 CLPSP04118 112 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms