RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 TNFSF4P23510 183 aa8.83□□□□□ -1
PRPF38A-202ENST00000474048 ACKR3P25106 362 aa8.83□□□□□ -1
PRPF38A-202ENST00000474048 GRNP28799 593 aaKnown RBP8.83□□□□□ -1
PRPF38A-202ENST00000474048 POU3F4P49335 361 aa8.83□□□□□ -1
PRPF38A-202ENST00000474048 CAV3P56539 151 aa8.83□□□□□ -1
PRPF38A-202ENST00000474048 OR10A3P58181 314 aa8.83□□□□□ -1
PRPF38A-202ENST00000474048 ERVS71-1P61550 626 aa8.83□□□□□ -1
PRPF38A-202ENST00000474048 DYNC1I2Q13409 638 aaKnown RBP8.83□□□□□ -1
PRPF38A-202ENST00000474048 SNTB1Q13884 538 aaKnown RBP8.83□□□□□ -1
PRPF38A-202ENST00000474048 FAM189A2Q15884 450 aa8.83□□□□□ -1
PRPF38A-202ENST00000474048 NCMAPQ5T1S8 102 aa8.83□□□□□ -1
PRPF38A-202ENST00000474048 LRRTM1Q86UE6 522 aa8.83□□□□□ -1
PRPF38A-202ENST00000474048 SPERTQ8NA61 448 aa8.83□□□□□ -1
PRPF38A-202ENST00000474048 DNAAF1Q8NEP3 725 aa8.83□□□□□ -1
PRPF38A-202ENST00000474048 FAM222BQ8WU58 562 aa8.83□□□□□ -1
PRPF38A-202ENST00000474048 S100ZQ8WXG8 99 aa8.83□□□□□ -1
PRPF38A-202ENST00000474048 MARS2Q96GW9 593 aaKnown RBP8.83□□□□□ -1
PRPF38A-202ENST00000474048 SOX7Q9BT81 388 aa8.83□□□□□ -1
PRPF38A-202ENST00000474048 PPIL3Q9H2H8 161 aaKnown RBP8.83□□□□□ -1
PRPF38A-202ENST00000474048 POFUT1Q9H488 388 aa8.83□□□□□ -1
PRPF38A-202ENST00000474048 PLK3Q9H4B4 646 aa8.83□□□□□ -1
PRPF38A-202ENST00000474048 HMG20AQ9NP66 347 aa8.83□□□□□ -1
PRPF38A-202ENST00000474048 CA10Q9NS85 328 aa8.83□□□□□ -1
PRPF38A-202ENST00000474048 TMEM100Q9NV29 134 aa8.83□□□□□ -1
PRPF38A-202ENST00000474048 FAIMQ9NVQ4 179 aa8.83□□□□□ -1
PRPF38A-202ENST00000474048 FZR1Q9UM11 496 aa8.83□□□□□ -1
PRPF38A-202ENST00000474048 RHBDD3Q9Y3P4 386 aa8.83□□□□□ -1
PRPF38A-202ENST00000474048 ETV7Q9Y603 341 aa8.83□□□□□ -1
PRPF38A-202ENST00000474048 PCNX1Q96RV3 2341 aa8.82□□□□□ -1
PRPF38A-202ENST00000474048 A0A075B6Q4 140 aa8.82□□□□□ -1
PRPF38A-202ENST00000474048 DPRXA6NFQ7 191 aa8.82□□□□□ -1
PRPF38A-202ENST00000474048 PRSS44E7EML9 344 aa8.82□□□□□ -1
PRPF38A-202ENST00000474048 SLC17A2O00624 439 aa8.82□□□□□ -1
PRPF38A-202ENST00000474048 TPD52L2O43399 206 aaKnown RBP8.82□□□□□ -1
PRPF38A-202ENST00000474048 KDM4BO94953 1096 aa8.82□□□□□ -1
PRPF38A-202ENST00000474048 ALX3O95076 343 aa8.82□□□□□ -1
PRPF38A-202ENST00000474048 CSTBP04080 98 aaKnown RBP8.82□□□□□ -1
PRPF38A-202ENST00000474048 TMEM225BP0DP42 221 aa8.82□□□□□ -1
PRPF38A-202ENST00000474048 CALCBP10092 127 aa8.82□□□□□ -1
PRPF38A-202ENST00000474048 ARSBP15848 533 aa8.82□□□□□ -1
PRPF38A-202ENST00000474048 KITLGP21583 273 aa8.82□□□□□ -1
PRPF38A-202ENST00000474048 CA6P23280 308 aa8.82□□□□□ -1
PRPF38A-202ENST00000474048 MPV17P39210 176 aa8.82□□□□□ -1
PRPF38A-202ENST00000474048 SCAND1P57086 179 aa8.82□□□□□ -1
PRPF38A-202ENST00000474048 RIN1Q13671 783 aa8.82□□□□□ -1
PRPF38A-202ENST00000474048 KISS1Q15726 138 aa8.82□□□□□ -1
PRPF38A-202ENST00000474048 CEACAM21Q3KPI0 293 aa8.82□□□□□ -1
PRPF38A-202ENST00000474048 Q6ZSR3 168 aa8.82□□□□□ -1
PRPF38A-202ENST00000474048 ZNF573Q86YE8 665 aa8.82□□□□□ -1
PRPF38A-202ENST00000474048 SAMD12Q8N8I0 201 aa8.82□□□□□ -1
PRPF38A-202ENST00000474048 OR8G5Q8NG78 346 aa8.82□□□□□ -1
PRPF38A-202ENST00000474048 OR52N4Q8NGI2 321 aa8.82□□□□□ -1
PRPF38A-202ENST00000474048 OR51A2Q8NGJ7 313 aa8.82□□□□□ -1
PRPF38A-202ENST00000474048 OR13G1Q8NGZ3 307 aa8.82□□□□□ -1
PRPF38A-202ENST00000474048 SSC4DQ8WTU2 575 aa8.82□□□□□ -1
PRPF38A-202ENST00000474048 TNFAIP8L1Q8WVP5 186 aa8.82□□□□□ -1
PRPF38A-202ENST00000474048 RNF170Q96K19 258 aa8.82□□□□□ -1
PRPF38A-202ENST00000474048 SYT3Q9BQG1 590 aa8.82□□□□□ -1
PRPF38A-202ENST00000474048 SLIRPQ9GZT3 109 aaKnown RBP8.82□□□□□ -1
PRPF38A-202ENST00000474048 CST11Q9H112 138 aa8.82□□□□□ -1
PRPF38A-202ENST00000474048 ZNF442Q9H7R0 627 aa8.82□□□□□ -1
PRPF38A-202ENST00000474048 LIN7BQ9HAP6 207 aa8.82□□□□□ -1
PRPF38A-202ENST00000474048 DYNLRB1Q9NP97 96 aa8.82□□□□□ -1
PRPF38A-202ENST00000474048 MRPS28Q9Y2Q9 187 aaKnown RBP8.82□□□□□ -1
PRPF38A-202ENST00000474048 SHISA3A0PJX4 238 aa8.81□□□□□ -1
PRPF38A-202ENST00000474048 BPNT1O95861 308 aa8.81□□□□□ -1
PRPF38A-202ENST00000474048 PLATP00750 562 aa8.81□□□□□ -1
PRPF38A-202ENST00000474048 SLC2A2P11168 524 aaPredicted RBP8.81□□□□□ -1
PRPF38A-202ENST00000474048 BMP4P12644 408 aa8.81□□□□□ -1
PRPF38A-202ENST00000474048 ANOS1P23352 680 aa8.81□□□□□ -1
PRPF38A-202ENST00000474048 GPM6AP51674 278 aa8.81□□□□□ -1
PRPF38A-202ENST00000474048 GNG3P63215 75 aa8.81□□□□□ -1
PRPF38A-202ENST00000474048 TFF3Q07654 80 aa8.81□□□□□ -1
PRPF38A-202ENST00000474048 PSG7Q13046 419 aa8.81□□□□□ -1
PRPF38A-202ENST00000474048 GPR176Q14439 515 aa8.81□□□□□ -1
PRPF38A-202ENST00000474048 P2RY14Q15391 338 aa8.81□□□□□ -1
PRPF38A-202ENST00000474048 RSU1Q15404 277 aa8.81□□□□□ -1
PRPF38A-202ENST00000474048 UBE2V2Q15819 145 aa8.81□□□□□ -1
PRPF38A-202ENST00000474048 UBE2NLQ5JXB2 153 aa8.81□□□□□ -1
PRPF38A-202ENST00000474048 MEX3BQ6ZN04 569 aaKnown RBP8.81□□□□□ -1
PRPF38A-202ENST00000474048 LINC00299Q6ZSB3 139 aa8.81□□□□□ -1
PRPF38A-202ENST00000474048 FBXL14Q8N1E6 418 aa8.81□□□□□ -1
PRPF38A-202ENST00000474048 OR5A2Q8NGI9 324 aa8.81□□□□□ -1
PRPF38A-202ENST00000474048 LGALS14Q8TCE9 139 aa8.81□□□□□ -1
PRPF38A-202ENST00000474048 MRPL24Q96A35 216 aaKnown RBP8.81□□□□□ -1
PRPF38A-202ENST00000474048 RFT1Q96AA3 541 aa8.81□□□□□ -1
PRPF38A-202ENST00000474048 DIRAS2Q96HU8 199 aa8.81□□□□□ -1
PRPF38A-202ENST00000474048 SPACA5Q96QH8 159 aa8.81□□□□□ -1
PRPF38A-202ENST00000474048 WDR12Q9GZL7 423 aaKnown RBP8.81□□□□□ -1
PRPF38A-202ENST00000474048 METTL9Q9H1A3 318 aa8.81□□□□□ -1
PRPF38A-202ENST00000474048 CRIM1Q9NZV1 1036 aa8.81□□□□□ -1
PRPF38A-202ENST00000474048 TAAR3PQ9P1P4 343 aa8.81□□□□□ -1
PRPF38A-202ENST00000474048 GHRLQ9UBU3 117 aa8.81□□□□□ -1
PRPF38A-202ENST00000474048 PLEKHB1Q9UF11 243 aaPredicted RBP8.81□□□□□ -1
PRPF38A-202ENST00000474048 FBXO9Q9UK97 447 aaPredicted RBP8.81□□□□□ -1
PRPF38A-202ENST00000474048 ING4Q9UNL4 249 aa8.81□□□□□ -1
PRPF38A-202ENST00000474048 POLDIP2Q9Y2S7 368 aa8.81□□□□□ -1
PRPF38A-202ENST00000474048 KLF2Q9Y5W3 355 aaPredicted RBP8.81□□□□□ -1
PRPF38A-202ENST00000474048 HCFC1P51610 2035 aa8.81□□□□□ -1
PRPF38A-202ENST00000474048 IGSF10Q6WRI0 2623 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms