RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 TRBV2A0A0J9YWF9 115 aa10.48□□□□□ -0.73
DDX56-209ENST00000473924 LOC100289279A0A1B0GTE1 492 aa10.48□□□□□ -0.73
DDX56-209ENST00000473924 ISPDA4D126 451 aa10.48□□□□□ -0.73
DDX56-209ENST00000473924 A6NIN4 97 aa10.48□□□□□ -0.73
DDX56-209ENST00000473924 DHRS7CA6NNS2 312 aa10.48□□□□□ -0.73
DDX56-209ENST00000473924 E9PI62 339 aa10.48□□□□□ -0.73
DDX56-209ENST00000473924 CYB5R3P00387 301 aaPredicted RBP10.48□□□□□ -0.73
DDX56-209ENST00000473924 NRASP01111 189 aa10.48□□□□□ -0.73
DDX56-209ENST00000473924 CCDC159P0C7I6 412 aa10.48□□□□□ -0.73
DDX56-209ENST00000473924 CCL1P22362 96 aa10.48□□□□□ -0.73
DDX56-209ENST00000473924 C21orf33P30042 268 aaPredicted RBP10.48□□□□□ -0.73
DDX56-209ENST00000473924 GATA4P43694 442 aa10.48□□□□□ -0.73
DDX56-209ENST00000473924 TGM4P49221 684 aa10.48□□□□□ -0.73
DDX56-209ENST00000473924 MPPED2Q15777 294 aa10.48□□□□□ -0.73
DDX56-209ENST00000473924 CEP78Q5JTW2 689 aa10.48□□□□□ -0.73
DDX56-209ENST00000473924 CLVS2Q5SYC1 327 aa10.48□□□□□ -0.73
DDX56-209ENST00000473924 PLCXD3Q63HM9 321 aa10.48□□□□□ -0.73
DDX56-209ENST00000473924 MOB3CQ70IA8 216 aa10.48□□□□□ -0.73
DDX56-209ENST00000473924 C1orf87Q8N0U7 546 aa10.48□□□□□ -0.73
DDX56-209ENST00000473924 OR52N1Q8NH53 320 aa10.48□□□□□ -0.73
DDX56-209ENST00000473924 OR5AK2Q8NH90 309 aa10.48□□□□□ -0.73
DDX56-209ENST00000473924 GATAD2BQ8WXI9 593 aa10.48□□□□□ -0.73
DDX56-209ENST00000473924 RNF166Q96A37 237 aaPredicted RBP10.48□□□□□ -0.73
DDX56-209ENST00000473924 ITPKCQ96DU7 683 aa10.48□□□□□ -0.73
DDX56-209ENST00000473924 RNF170Q96K19 258 aa10.48□□□□□ -0.73
DDX56-209ENST00000473924 RASSF4Q9H2L5 321 aa10.48□□□□□ -0.73
DDX56-209ENST00000473924 DCAF16Q9NXF7 216 aa10.48□□□□□ -0.73
DDX56-209ENST00000473924 BABAM2Q9NXR7 383 aa10.48□□□□□ -0.73
DDX56-209ENST00000473924 ERGIC3Q9Y282 383 aa10.48□□□□□ -0.73
DDX56-209ENST00000473924 NPTNQ9Y639 398 aa10.48□□□□□ -0.73
DDX56-209ENST00000473924 FLNAP21333 2647 aaKnown RBP10.48□□□□□ -0.73
DDX56-209ENST00000473924 CELSR1Q9NYQ6 3014 aa10.47□□□□□ -0.73
DDX56-209ENST00000473924 TANC2Q9HCD6 1990 aa10.47□□□□□ -0.73
DDX56-209ENST00000473924 A0A096LNT2 108 aa10.47□□□□□ -0.73
DDX56-209ENST00000473924 hCG_1807616A0A1W2PRN6 198 aa10.47□□□□□ -0.73
DDX56-209ENST00000473924 LRP5LA4QPB2 252 aa10.47□□□□□ -0.73
DDX56-209ENST00000473924 TMEM212A6NML5 194 aa10.47□□□□□ -0.73
DDX56-209ENST00000473924 OR4C45A6NMZ5 311 aa10.47□□□□□ -0.73
DDX56-209ENST00000473924 TMEM178BH3BS89 294 aa10.47□□□□□ -0.73
DDX56-209ENST00000473924 ISG15P05161 165 aa10.47□□□□□ -0.73
DDX56-209ENST00000473924 CDK1P06493 297 aa10.47□□□□□ -0.73
DDX56-209ENST00000473924 HEXAP06865 529 aa10.47□□□□□ -0.73
DDX56-209ENST00000473924 RPSAP08865 295 aaKnown RBP10.47□□□□□ -0.73
DDX56-209ENST00000473924 ZNF20P17024 532 aa10.47□□□□□ -0.73
DDX56-209ENST00000473924 RBMXP38159 391 aaKnown RBP10.47□□□□□ -0.73
DDX56-209ENST00000473924 GTF2A1P52655 376 aaPredicted RBP10.47□□□□□ -0.73
DDX56-209ENST00000473924 HNRNPA0Q13151 305 aaKnown RBP10.47□□□□□ -0.73
DDX56-209ENST00000473924 CEACAM21Q3KPI0 293 aa10.47□□□□□ -0.73
DDX56-209ENST00000473924 CCDC58Q4VC31 144 aa10.47□□□□□ -0.73
DDX56-209ENST00000473924 RPL22L1Q6P5R6 122 aaKnown RBP10.47□□□□□ -0.73
DDX56-209ENST00000473924 BIVMQ86UB2 503 aa10.47□□□□□ -0.73
DDX56-209ENST00000473924 OR1M1Q8NGA1 313 aa10.47□□□□□ -0.73
DDX56-209ENST00000473924 OR13C3Q8NGS6 347 aa10.47□□□□□ -0.73
DDX56-209ENST00000473924 OR5P3Q8WZ94 311 aa10.47□□□□□ -0.73
DDX56-209ENST00000473924 TRIM36Q9NQ86 728 aa10.47□□□□□ -0.73
DDX56-209ENST00000473924 GPR173Q9NS66 373 aa10.47□□□□□ -0.73
DDX56-209ENST00000473924 FKBP14Q9NWM8 211 aa10.47□□□□□ -0.73
DDX56-209ENST00000473924 C1orf123Q9NWV4 160 aa10.47□□□□□ -0.73
DDX56-209ENST00000473924 HHLA2Q9UM44 414 aa10.47□□□□□ -0.73
DDX56-209ENST00000473924 VPS13CQ709C8 3753 aa10.46□□□□□ -0.73
DDX56-209ENST00000473924 ANKRD61A6NGH8 418 aa10.46□□□□□ -0.73
DDX56-209ENST00000473924 TMEM210A6NLX4 147 aa10.46□□□□□ -0.73
DDX56-209ENST00000473924 LMX1BO60663 402 aa10.46□□□□□ -0.73
DDX56-209ENST00000473924 ZFPL1O95159 310 aa10.46□□□□□ -0.73
DDX56-209ENST00000473924 PTBP3O95758 552 aaKnown RBP10.46□□□□□ -0.73
DDX56-209ENST00000473924 SERPINA3P01011 423 aa10.46□□□□□ -0.73
DDX56-209ENST00000473924 EEF1B2P24534 225 aaKnown RBP10.46□□□□□ -0.73
DDX56-209ENST00000473924 PMELP40967 661 aa10.46□□□□□ -0.73
DDX56-209ENST00000473924 GPM6AP51674 278 aa10.46□□□□□ -0.73
DDX56-209ENST00000473924 WNT4P56705 351 aa10.46□□□□□ -0.73
DDX56-209ENST00000473924 BTG1P62324 171 aa10.46□□□□□ -0.73
DDX56-209ENST00000473924 ZNF154Q13106 437 aa10.46□□□□□ -0.73
DDX56-209ENST00000473924 ZNF181Q2M3W8 571 aa10.46□□□□□ -0.73
DDX56-209ENST00000473924 TMEM249Q2WGJ8 235 aa10.46□□□□□ -0.73
DDX56-209ENST00000473924 DMRTC1Q5HYR2 192 aa10.46□□□□□ -0.73
DDX56-209ENST00000473924 RBM48Q5RL73 367 aaKnown RBP10.46□□□□□ -0.73
DDX56-209ENST00000473924 XAF1Q6GPH4 301 aa10.46□□□□□ -0.73
DDX56-209ENST00000473924 CLEC9AQ6UXN8 241 aa10.46□□□□□ -0.73
DDX56-209ENST00000473924 Q6ZSR3 168 aa10.46□□□□□ -0.73
DDX56-209ENST00000473924 KRT74Q7RTS7 529 aa10.46□□□□□ -0.73
DDX56-209ENST00000473924 BOLLQ8N9W6 283 aaKnown RBP10.46□□□□□ -0.73
DDX56-209ENST00000473924 OR5A2Q8NGI9 324 aa10.46□□□□□ -0.73
DDX56-209ENST00000473924 CLDND2Q8NHS1 167 aa10.46□□□□□ -0.73
DDX56-209ENST00000473924 Q8TCH9 128 aa10.46□□□□□ -0.73
DDX56-209ENST00000473924 TSEN15Q8WW01 171 aaKnown RBP10.46□□□□□ -0.73
DDX56-209ENST00000473924 HPSE2Q8WWQ2 592 aa10.46□□□□□ -0.73
DDX56-209ENST00000473924 C10orf35Q96D05 121 aa10.46□□□□□ -0.73
DDX56-209ENST00000473924 SMR3AQ99954 134 aa10.46□□□□□ -0.73
DDX56-209ENST00000473924 GAL3ST1Q99999 423 aa10.46□□□□□ -0.73
DDX56-209ENST00000473924 PDCD1LG2Q9BQ51 273 aa10.46□□□□□ -0.73
DDX56-209ENST00000473924 MND1Q9BWT6 205 aa10.46□□□□□ -0.73
DDX56-209ENST00000473924 CCDC90BQ9GZT6 254 aa10.46□□□□□ -0.73
DDX56-209ENST00000473924 ERVK-18Q9QC07 812 aa10.46□□□□□ -0.73
DDX56-209ENST00000473924 RNF7Q9UBF6 113 aa10.46□□□□□ -0.73
DDX56-209ENST00000473924 BLOC1S6Q9UL45 172 aa10.46□□□□□ -0.73
DDX56-209ENST00000473924 HIVEP1P15822 2718 aa10.46□□□□□ -0.74
DDX56-209ENST00000473924 F8P00451 2351 aa10.45□□□□□ -0.74
DDX56-209ENST00000473924 PPIAL4EA0A075B759 164 aa10.45□□□□□ -0.74
DDX56-209ENST00000473924 OR5B21A6NL26 309 aa10.45□□□□□ -0.74
DDX56-209ENST00000473924 ZNF732B4DXR9 585 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms