RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 WDR31Q8NA23 367 aa2.62□□□□□ -1.99
PRPF40A-208ENST00000472760 OR4M2Q8NGB6 313 aa2.62□□□□□ -1.99
PRPF40A-208ENST00000472760 KIAA1143Q96AT1 154 aaPredicted RBP2.62□□□□□ -1.99
PRPF40A-208ENST00000472760 GPR82Q96P67 336 aa2.62□□□□□ -1.99
PRPF40A-208ENST00000472760 IP6K3Q96PC2 410 aa2.62□□□□□ -1.99
PRPF40A-208ENST00000472760 RTBDNQ9BSG5 229 aaPredicted RBP2.62□□□□□ -1.99
PRPF40A-208ENST00000472760 MARVELD1Q9BSK0 173 aa2.62□□□□□ -1.99
PRPF40A-208ENST00000472760 OR2AG1Q9H205 316 aa2.62□□□□□ -1.99
PRPF40A-208ENST00000472760 CYP3A43Q9HB55 503 aa2.62□□□□□ -1.99
PRPF40A-208ENST00000472760 CSNK1G1Q9HCP0 422 aa2.62□□□□□ -1.99
PRPF40A-208ENST00000472760 SIGLEC7Q9Y286 467 aa2.62□□□□□ -1.99
PRPF40A-208ENST00000472760 WIF1Q9Y5W5 379 aa2.62□□□□□ -1.99
PRPF40A-208ENST00000472760 NUP214P35658 2090 aaPredicted RBP2.62□□□□□ -1.99
PRPF40A-208ENST00000472760 ARPC4-TTLL3A0A0A6YYG9 625 aa2.61□□□□□ -1.99
PRPF40A-208ENST00000472760 A0A0B4J2E0 115 aa2.61□□□□□ -1.99
PRPF40A-208ENST00000472760 ZNF98A6NK75 572 aa2.61□□□□□ -1.99
PRPF40A-208ENST00000472760 LINC01619G3V211 115 aa2.61□□□□□ -1.99
PRPF40A-208ENST00000472760 TRDMT1O14717 391 aaKnown RBP2.61□□□□□ -1.99
PRPF40A-208ENST00000472760 PSPHP1O15172 72 aa2.61□□□□□ -1.99
PRPF40A-208ENST00000472760 SRMP19623 302 aa2.61□□□□□ -1.99
PRPF40A-208ENST00000472760 KRTAP10-10P60014 251 aa2.61□□□□□ -1.99
PRPF40A-208ENST00000472760 KLHL12Q53G59 568 aa2.61□□□□□ -1.99
PRPF40A-208ENST00000472760 STEAP4Q687X5 459 aa2.61□□□□□ -1.99
PRPF40A-208ENST00000472760 OR2W3Q7Z3T1 314 aa2.61□□□□□ -1.99
PRPF40A-208ENST00000472760 VTCN1Q7Z7D3 282 aa2.61□□□□□ -1.99
PRPF40A-208ENST00000472760 TMEM104Q8NE00 496 aa2.61□□□□□ -1.99
PRPF40A-208ENST00000472760 OR2Z1Q8NG97 314 aa2.61□□□□□ -1.99
PRPF40A-208ENST00000472760 TCP10LQ8TDR4 215 aa2.61□□□□□ -1.99
PRPF40A-208ENST00000472760 ZNF707Q96C28 371 aaPredicted RBP2.61□□□□□ -1.99
PRPF40A-208ENST00000472760 WDR34Q96EX3 536 aa2.61□□□□□ -1.99
PRPF40A-208ENST00000472760 UBE2E2Q96LR5 201 aa2.61□□□□□ -1.99
PRPF40A-208ENST00000472760 TMEM175Q9BSA9 504 aa2.61□□□□□ -1.99
PRPF40A-208ENST00000472760 FRMD8P1Q9BZ68 369 aaPredicted RBP2.61□□□□□ -1.99
PRPF40A-208ENST00000472760 ARMC7Q9H6L4 198 aa2.61□□□□□ -1.99
PRPF40A-208ENST00000472760 HEBP1Q9NRV9 189 aa2.61□□□□□ -1.99
PRPF40A-208ENST00000472760 NDRG2Q9UN36 371 aaKnown RBP2.61□□□□□ -1.99
PRPF40A-208ENST00000472760 OR51B2Q9Y5P1 312 aa2.61□□□□□ -1.99
PRPF40A-208ENST00000472760 ISPDA4D126 451 aa2.6□□□□□ -1.99
PRPF40A-208ENST00000472760 CEACAM18A8MTB9 384 aa2.6□□□□□ -1.99
PRPF40A-208ENST00000472760 TTC4O95801 387 aa2.6□□□□□ -1.99
PRPF40A-208ENST00000472760 PTTG1O95997 202 aa2.6□□□□□ -1.99
PRPF40A-208ENST00000472760 IGLV2-8P01709 118 aa2.6□□□□□ -1.99
PRPF40A-208ENST00000472760 KLK1P06870 262 aa2.6□□□□□ -1.99
PRPF40A-208ENST00000472760 PRKACAP17612 351 aa2.6□□□□□ -1.99
PRPF40A-208ENST00000472760 CXCR1P25024 350 aa2.6□□□□□ -1.99
PRPF40A-208ENST00000472760 ERFP50548 548 aa2.6□□□□□ -1.99
PRPF40A-208ENST00000472760 CMC4P56277 68 aaPredicted RBP2.6□□□□□ -1.99
PRPF40A-208ENST00000472760 TAS2R43P59537 309 aa2.6□□□□□ -1.99
PRPF40A-208ENST00000472760 PPP1CAP62136 330 aa2.6□□□□□ -1.99
PRPF40A-208ENST00000472760 INCA1Q0VD86 236 aa2.6□□□□□ -1.99
PRPF40A-208ENST00000472760 LUZP6Q538Z0 58 aa2.6□□□□□ -1.99
PRPF40A-208ENST00000472760 KPRPQ5T749 579 aaPredicted RBP2.6□□□□□ -1.99
PRPF40A-208ENST00000472760 THOC7Q6I9Y2 204 aaKnown RBP2.6□□□□□ -1.99
PRPF40A-208ENST00000472760 DEGS2Q6QHC5 323 aa2.6□□□□□ -1.99
PRPF40A-208ENST00000472760 PP632Q6XCG6 107 aa2.6□□□□□ -1.99
PRPF40A-208ENST00000472760 LINC00523Q86TU6 105 aa2.6□□□□□ -1.99
PRPF40A-208ENST00000472760 DAW1Q8N136 415 aa2.6□□□□□ -1.99
PRPF40A-208ENST00000472760 OR10Z1Q8NGY1 313 aa2.6□□□□□ -1.99
PRPF40A-208ENST00000472760 SNF8Q96H20 258 aa2.6□□□□□ -1.99
PRPF40A-208ENST00000472760 Q96MT0 163 aa2.6□□□□□ -1.99
PRPF40A-208ENST00000472760 ALS2CR12Q96Q35 445 aa2.6□□□□□ -1.99
PRPF40A-208ENST00000472760 NAPGQ99747 312 aaPredicted RBP2.6□□□□□ -1.99
PRPF40A-208ENST00000472760 RHOXF2Q9BQY4 288 aa2.6□□□□□ -1.99
PRPF40A-208ENST00000472760 TAS2R5Q9NYW4 299 aa2.6□□□□□ -1.99
PRPF40A-208ENST00000472760 IFNKQ9P0W0 207 aa2.6□□□□□ -1.99
PRPF40A-208ENST00000472760 ZMAT5Q9UDW3 170 aaKnown RBP2.6□□□□□ -1.99
PRPF40A-208ENST00000472760 NEURL4Q96JN8 1562 aa2.59□□□□□ -1.99
PRPF40A-208ENST00000472760 LOC100653049A0A140TA62 436 aa2.59□□□□□ -1.99
PRPF40A-208ENST00000472760 A0A1W2PRF3 423 aa2.59□□□□□ -1.99
PRPF40A-208ENST00000472760 A0A1W2PRM7 423 aa2.59□□□□□ -1.99
PRPF40A-208ENST00000472760 KRT34O76011 436 aa2.59□□□□□ -1.99
PRPF40A-208ENST00000472760 SLC35G6P0C7Q6 338 aa2.59□□□□□ -1.99
PRPF40A-208ENST00000472760 CFHR2P36980 270 aa2.59□□□□□ -1.99
PRPF40A-208ENST00000472760 KDM4DQ6B0I6 523 aa2.59□□□□□ -1.99
PRPF40A-208ENST00000472760 PRSS54Q6PEW0 395 aa2.59□□□□□ -1.99
PRPF40A-208ENST00000472760 CASP12Q6UXS9 341 aa2.59□□□□□ -1.99
PRPF40A-208ENST00000472760 KRTAP5-2Q701N4 177 aa2.59□□□□□ -1.99
PRPF40A-208ENST00000472760 SLC35D2Q76EJ3 337 aa2.59□□□□□ -1.99
PRPF40A-208ENST00000472760 FBXO36Q8NEA4 188 aa2.59□□□□□ -1.99
PRPF40A-208ENST00000472760 ING5Q8WYH8 240 aa2.59□□□□□ -1.99
PRPF40A-208ENST00000472760 FAM19A4Q96LR4 140 aa2.59□□□□□ -1.99
PRPF40A-208ENST00000472760 C1orf50Q9BV19 199 aa2.59□□□□□ -1.99
PRPF40A-208ENST00000472760 ARV1Q9H2C2 271 aa2.59□□□□□ -1.99
PRPF40A-208ENST00000472760 TMEM100Q9NV29 134 aa2.59□□□□□ -1.99
PRPF40A-208ENST00000472760 IGHV3OR16-8A0A075B7F1 116 aa2.58□□□□□ -2
PRPF40A-208ENST00000472760 A8MWL6 223 aa2.58□□□□□ -2
PRPF40A-208ENST00000472760 H0YC42 278 aa2.58□□□□□ -2
PRPF40A-208ENST00000472760 ZNF701M0R085 212 aaPredicted RBP2.58□□□□□ -2
PRPF40A-208ENST00000472760 DFFAO00273 331 aa2.58□□□□□ -2
PRPF40A-208ENST00000472760 CCDC22O60826 627 aa2.58□□□□□ -2
PRPF40A-208ENST00000472760 LHBP01229 141 aa2.58□□□□□ -2
PRPF40A-208ENST00000472760 GCGP01275 180 aa2.58□□□□□ -2
PRPF40A-208ENST00000472760 MBP02144 154 aa2.58□□□□□ -2
PRPF40A-208ENST00000472760 NTF3P20783 257 aa2.58□□□□□ -2
PRPF40A-208ENST00000472760 MPV17P39210 176 aa2.58□□□□□ -2
PRPF40A-208ENST00000472760 CSKP41240 450 aa2.58□□□□□ -2
PRPF40A-208ENST00000472760 GDI2P50395 445 aaKnown RBP2.58□□□□□ -2
PRPF40A-208ENST00000472760 MTPNP58546 118 aa2.58□□□□□ -2
PRPF40A-208ENST00000472760 SLC35A1P78382 337 aa2.58□□□□□ -2
PRPF40A-208ENST00000472760 C2orf54Q08AI8 447 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms