RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 SLC36A3Q495N2 470 aa7.54□□□□□ -1.2
VCL-204ENST00000472585 FGD3Q5JSP0 725 aa7.54□□□□□ -1.2
VCL-204ENST00000472585 LDLRAD2Q5SZI1 272 aa7.54□□□□□ -1.2
VCL-204ENST00000472585 DNM1P34Q6PK57 102 aa7.54□□□□□ -1.2
VCL-204ENST00000472585 DRAM2Q6UX65 266 aa7.54□□□□□ -1.2
VCL-204ENST00000472585 SLC16A9Q7RTY1 509 aa7.54□□□□□ -1.2
VCL-204ENST00000472585 SLC36A1Q7Z2H8 476 aa7.54□□□□□ -1.2
VCL-204ENST00000472585 DPY19L4Q7Z388 723 aa7.54□□□□□ -1.2
VCL-204ENST00000472585 DCXRQ7Z4W1 244 aa7.54□□□□□ -1.2
VCL-204ENST00000472585 LINC00471Q8N535 108 aa7.54□□□□□ -1.2
VCL-204ENST00000472585 WFDC9Q8NEX5 89 aa7.54□□□□□ -1.2
VCL-204ENST00000472585 OR9Q1Q8NGQ5 310 aa7.54□□□□□ -1.2
VCL-204ENST00000472585 H1FXQ92522 213 aaKnown RBP7.54□□□□□ -1.2
VCL-204ENST00000472585 RPL3LQ92901 407 aaKnown RBP7.54□□□□□ -1.2
VCL-204ENST00000472585 SPTSSAQ969W0 71 aa7.54□□□□□ -1.2
VCL-204ENST00000472585 RAB3IPQ96QF0 476 aaPredicted RBP7.54□□□□□ -1.2
VCL-204ENST00000472585 KCNJ15Q99712 375 aa7.54□□□□□ -1.2
VCL-204ENST00000472585 NPFFR1Q9GZQ6 430 aa7.54□□□□□ -1.2
VCL-204ENST00000472585 SP140LQ9H930 580 aa7.54□□□□□ -1.2
VCL-204ENST00000472585 C14orf119Q9NWQ9 140 aa7.54□□□□□ -1.2
VCL-204ENST00000472585 GID8Q9NWU2 228 aa7.54□□□□□ -1.2
VCL-204ENST00000472585 EPPK1P58107 5090 aaKnown RBP7.54□□□□□ -1.2
VCL-204ENST00000472585 STAB2Q8WWQ8 2551 aa7.54□□□□□ -1.2
VCL-204ENST00000472585 IGKV1D-17A0A075B6S4 117 aa7.53□□□□□ -1.2
VCL-204ENST00000472585 M0R1W7 72 aa7.53□□□□□ -1.2
VCL-204ENST00000472585 AKR7A2O43488 359 aa7.53□□□□□ -1.2
VCL-204ENST00000472585 DUS4LO95620 317 aaKnown RBP7.53□□□□□ -1.2
VCL-204ENST00000472585 RENP00797 406 aa7.53□□□□□ -1.2
VCL-204ENST00000472585 PF4P02776 101 aa7.53□□□□□ -1.2
VCL-204ENST00000472585 SEMG1P04279 462 aa7.53□□□□□ -1.2
VCL-204ENST00000472585 ACAA1P09110 424 aaPredicted RBP7.53□□□□□ -1.2
VCL-204ENST00000472585 PF4V1P10720 104 aa7.53□□□□□ -1.2
VCL-204ENST00000472585 RHCEP18577 417 aa7.53□□□□□ -1.2
VCL-204ENST00000472585 SLC7A2P52569 658 aa7.53□□□□□ -1.2
VCL-204ENST00000472585 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.53□□□□□ -1.2
VCL-204ENST00000472585 ACSM1Q08AH1 577 aa7.53□□□□□ -1.2
VCL-204ENST00000472585 LHFPL4Q7Z7J7 247 aa7.53□□□□□ -1.2
VCL-204ENST00000472585 ZDHHC21Q8IVQ6 265 aa7.53□□□□□ -1.2
VCL-204ENST00000472585 MKXQ8IYA7 352 aa7.53□□□□□ -1.2
VCL-204ENST00000472585 Q8N2B8 174 aa7.53□□□□□ -1.2
VCL-204ENST00000472585 ZNRF1Q8ND25 227 aa7.53□□□□□ -1.2
VCL-204ENST00000472585 OR51G2Q8NGK0 314 aa7.53□□□□□ -1.2
VCL-204ENST00000472585 FANK1Q8TC84 345 aa7.53□□□□□ -1.2
VCL-204ENST00000472585 DPF1Q92782 380 aa7.53□□□□□ -1.2
VCL-204ENST00000472585 C12orf43Q96C57 262 aaKnown RBP7.53□□□□□ -1.2
VCL-204ENST00000472585 RCC1LQ96I51 464 aaKnown RBP7.53□□□□□ -1.2
VCL-204ENST00000472585 AMELYQ99218 206 aa7.53□□□□□ -1.2
VCL-204ENST00000472585 NKX3-1Q99801 234 aaPredicted RBP7.53□□□□□ -1.2
VCL-204ENST00000472585 IFT27Q9BW83 186 aa7.53□□□□□ -1.2
VCL-204ENST00000472585 KRTAP17-1Q9BYP8 105 aa7.53□□□□□ -1.2
VCL-204ENST00000472585 WNT10AQ9GZT5 417 aa7.53□□□□□ -1.2
VCL-204ENST00000472585 NSRP1Q9H0G5 558 aaKnown RBP7.53□□□□□ -1.2
VCL-204ENST00000472585 EGLN3Q9H6Z9 239 aa7.53□□□□□ -1.2
VCL-204ENST00000472585 METTL8Q9H825 291 aaKnown RBP7.53□□□□□ -1.2
VCL-204ENST00000472585 CENPMQ9NSP4 180 aa7.53□□□□□ -1.2
VCL-204ENST00000472585 NOP16Q9Y3C1 178 aaKnown RBP7.53□□□□□ -1.2
VCL-204ENST00000472585 COMMD3-BMI1R4GMX3 469 aa7.53□□□□□ -1.2
VCL-204ENST00000472585 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.52□□□□□ -1.21
VCL-204ENST00000472585 hCG_38984A0A1B0GV85 526 aa7.52□□□□□ -1.21
VCL-204ENST00000472585 ZNF593O00488 134 aaPredicted RBP7.52□□□□□ -1.21
VCL-204ENST00000472585 SIGLEC5O15389 551 aa7.52□□□□□ -1.21
VCL-204ENST00000472585 RHBDL1O75783 438 aa7.52□□□□□ -1.21
VCL-204ENST00000472585 GYPBP06028 91 aa7.52□□□□□ -1.21
VCL-204ENST00000472585 CLUP10909 449 aa7.52□□□□□ -1.21
VCL-204ENST00000472585 ZNF823P16415 610 aa7.52□□□□□ -1.21
VCL-204ENST00000472585 JUNBP17275 347 aaPredicted RBP7.52□□□□□ -1.21
VCL-204ENST00000472585 ACKR3P25106 362 aa7.52□□□□□ -1.21
VCL-204ENST00000472585 SLC6A6P31641 620 aa7.52□□□□□ -1.21
VCL-204ENST00000472585 DCTDP32321 178 aa7.52□□□□□ -1.21
VCL-204ENST00000472585 GSSP48637 474 aa7.52□□□□□ -1.21
VCL-204ENST00000472585 GSK3AP49840 483 aa7.52□□□□□ -1.21
VCL-204ENST00000472585 LRRC75BQ2VPJ9 315 aa7.52□□□□□ -1.21
VCL-204ENST00000472585 LRRC10Q5BKY1 277 aa7.52□□□□□ -1.21
VCL-204ENST00000472585 FAM76BQ5HYJ3 339 aa7.52□□□□□ -1.21
VCL-204ENST00000472585 DMRTC1Q5HYR2 192 aa7.52□□□□□ -1.21
VCL-204ENST00000472585 TCTEX1D4Q5JR98 221 aa7.52□□□□□ -1.21
VCL-204ENST00000472585 CYP4Z1Q86W10 505 aa7.52□□□□□ -1.21
VCL-204ENST00000472585 PAPD5Q8NDF8 572 aaKnown RBP7.52□□□□□ -1.21
VCL-204ENST00000472585 OR8D4Q8NGM9 314 aa7.52□□□□□ -1.21
VCL-204ENST00000472585 OR8S1Q8NH09 359 aa7.52□□□□□ -1.21
VCL-204ENST00000472585 SLAMF6Q96DU3 332 aa7.52□□□□□ -1.21
VCL-204ENST00000472585 REEP6Q96HR9 211 aa7.52□□□□□ -1.21
VCL-204ENST00000472585 SIKE1Q9BRV8 207 aa7.52□□□□□ -1.21
VCL-204ENST00000472585 COPS4Q9BT78 406 aa7.52□□□□□ -1.21
VCL-204ENST00000472585 NDEL1Q9GZM8 345 aa7.52□□□□□ -1.21
VCL-204ENST00000472585 C19orf12Q9NSK7 152 aa7.52□□□□□ -1.21
VCL-204ENST00000472585 DCAF13Q9NV06 445 aaKnown RBP7.52□□□□□ -1.21
VCL-204ENST00000472585 SLC25A10Q9UBX3 287 aaPredicted RBP7.52□□□□□ -1.21
VCL-204ENST00000472585 KCNG2Q9UJ96 466 aa7.52□□□□□ -1.21
VCL-204ENST00000472585 ZNF222Q9UK12 451 aa7.52□□□□□ -1.21
VCL-204ENST00000472585 SF3B6Q9Y3B4 125 aaKnown RBP7.52□□□□□ -1.21
VCL-204ENST00000472585 A0A1W2PRX2 142 aa7.51□□□□□ -1.21
VCL-204ENST00000472585 DHRS12A0PJE2 317 aa7.51□□□□□ -1.21
VCL-204ENST00000472585 FAM90A8PA6NJQ4 464 aa7.51□□□□□ -1.21
VCL-204ENST00000472585 ANKRD30BLA7E2S9 258 aa7.51□□□□□ -1.21
VCL-204ENST00000472585 ZNF850A8MQ14 1090 aa7.51□□□□□ -1.21
VCL-204ENST00000472585 GSTA4O15217 222 aa7.51□□□□□ -1.21
VCL-204ENST00000472585 TBX1O43435 398 aa7.51□□□□□ -1.21
VCL-204ENST00000472585 XRCC2O43543 280 aa7.51□□□□□ -1.21
VCL-204ENST00000472585 ANGPTL7O43827 346 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms