RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 NDUFAF7Q7L592 441 aa2.02□□□□□ -2.09
PTCD3-209ENST00000472044 TRAM1L1Q8N609 369 aa2.02□□□□□ -2.09
PTCD3-209ENST00000472044 LRRC52Q8N7C0 313 aa2.02□□□□□ -2.09
PTCD3-209ENST00000472044 FAM184AQ8NB25 1140 aa2.02□□□□□ -2.09
PTCD3-209ENST00000472044 OR10Z1Q8NGY1 313 aa2.02□□□□□ -2.09
PTCD3-209ENST00000472044 ZNF721Q8TF20 911 aa2.02□□□□□ -2.09
PTCD3-209ENST00000472044 PIH1D2Q8WWB5 315 aa2.02□□□□□ -2.09
PTCD3-209ENST00000472044 CDS1Q92903 461 aa2.02□□□□□ -2.09
PTCD3-209ENST00000472044 ZNF707Q96C28 371 aaPredicted RBP2.02□□□□□ -2.09
PTCD3-209ENST00000472044 CDX2Q99626 313 aaPredicted RBP2.02□□□□□ -2.09
PTCD3-209ENST00000472044 CTRCQ99895 268 aa2.02□□□□□ -2.09
PTCD3-209ENST00000472044 NUDT9Q9BW91 350 aa2.02□□□□□ -2.09
PTCD3-209ENST00000472044 TDRD3Q9H7E2 651 aaKnown RBP2.02□□□□□ -2.09
PTCD3-209ENST00000472044 RPRD1BQ9NQG5 326 aaKnown RBP2.02□□□□□ -2.09
PTCD3-209ENST00000472044 SIGLEC7Q9Y286 467 aa2.02□□□□□ -2.09
PTCD3-209ENST00000472044 LRRC42Q9Y546 428 aa2.02□□□□□ -2.09
PTCD3-209ENST00000472044 TMEM131Q92545 1883 aa2.01□□□□□ -2.09
PTCD3-209ENST00000472044 IGKV1D-17A0A075B6S4 117 aa2.01□□□□□ -2.09
PTCD3-209ENST00000472044 CCL15-CCL14A0A0B4J2E2 113 aa2.01□□□□□ -2.09
PTCD3-209ENST00000472044 GOLGA8JA6NMD2 632 aa2.01□□□□□ -2.09
PTCD3-209ENST00000472044 BTNL10A8MVZ5 291 aa2.01□□□□□ -2.09
PTCD3-209ENST00000472044 CENPBD1B2RD01 187 aa2.01□□□□□ -2.09
PTCD3-209ENST00000472044 K7EM74 188 aa2.01□□□□□ -2.09
PTCD3-209ENST00000472044 ZNF701M0R085 212 aaPredicted RBP2.01□□□□□ -2.09
PTCD3-209ENST00000472044 M0R1X1 148 aa2.01□□□□□ -2.09
PTCD3-209ENST00000472044 SLC19A2O60779 497 aa2.01□□□□□ -2.09
PTCD3-209ENST00000472044 LCA5LO95447 670 aa2.01□□□□□ -2.09
PTCD3-209ENST00000472044 IGKV1-17P01599 117 aa2.01□□□□□ -2.09
PTCD3-209ENST00000472044 GOLGA8HP0CJ92 632 aa2.01□□□□□ -2.09
PTCD3-209ENST00000472044 HSPD1P10809 573 aaKnown RBP2.01□□□□□ -2.09
PTCD3-209ENST00000472044 PMCHP20382 165 aa2.01□□□□□ -2.09
PTCD3-209ENST00000472044 NTF3P20783 257 aa2.01□□□□□ -2.09
PTCD3-209ENST00000472044 GABRR2P28476 465 aa2.01□□□□□ -2.09
PTCD3-209ENST00000472044 CFHR2P36980 270 aa2.01□□□□□ -2.09
PTCD3-209ENST00000472044 IGFBP7Q16270 282 aa2.01□□□□□ -2.09
PTCD3-209ENST00000472044 CCL15Q16663 113 aa2.01□□□□□ -2.09
PTCD3-209ENST00000472044 C6orf99Q4VX62 202 aa2.01□□□□□ -2.09
PTCD3-209ENST00000472044 KDM4DQ6B0I6 523 aa2.01□□□□□ -2.09
PTCD3-209ENST00000472044 OR2W3Q7Z3T1 314 aa2.01□□□□□ -2.09
PTCD3-209ENST00000472044 KLF14Q8TD94 323 aaPredicted RBP2.01□□□□□ -2.09
PTCD3-209ENST00000472044 CPNE4Q96A23 557 aaPredicted RBP2.01□□□□□ -2.09
PTCD3-209ENST00000472044 FRMD8P1Q9BZ68 369 aaPredicted RBP2.01□□□□□ -2.09
PTCD3-209ENST00000472044 CYP3A43Q9HB55 503 aa2.01□□□□□ -2.09
PTCD3-209ENST00000472044 DYRK4Q9NR20 520 aa2.01□□□□□ -2.09
PTCD3-209ENST00000472044 FBXO8Q9NRD0 319 aa2.01□□□□□ -2.09
PTCD3-209ENST00000472044 HEBP1Q9NRV9 189 aa2.01□□□□□ -2.09
PTCD3-209ENST00000472044 ZNF608Q9ULD9 1512 aaPredicted RBP2.01□□□□□ -2.09
PTCD3-209ENST00000472044 A0A1W2PRF3 423 aa2□□□□□ -2.09
PTCD3-209ENST00000472044 A0A1W2PRM7 423 aa2□□□□□ -2.09
PTCD3-209ENST00000472044 TTC4O95801 387 aa2□□□□□ -2.09
PTCD3-209ENST00000472044 SNAI1O95863 264 aaPredicted RBP2□□□□□ -2.09
PTCD3-209ENST00000472044 RPN2P04844 631 aa2□□□□□ -2.09
PTCD3-209ENST00000472044 NELFEP18615 380 aaKnown RBP2□□□□□ -2.09
PTCD3-209ENST00000472044 PRKACBP22694 351 aa2□□□□□ -2.09
PTCD3-209ENST00000472044 CSKP41240 450 aa2□□□□□ -2.09
PTCD3-209ENST00000472044 INCA1Q0VD86 236 aa2□□□□□ -2.09
PTCD3-209ENST00000472044 KPRPQ5T749 579 aaPredicted RBP2□□□□□ -2.09
PTCD3-209ENST00000472044 Q6ZSR6 202 aa2□□□□□ -2.09
PTCD3-209ENST00000472044 LINC00523Q86TU6 105 aa2□□□□□ -2.09
PTCD3-209ENST00000472044 SLC30A8Q8IWU4 369 aa2□□□□□ -2.09
PTCD3-209ENST00000472044 WDR31Q8NA23 367 aa2□□□□□ -2.09
PTCD3-209ENST00000472044 OR5T3Q8NGG3 340 aa2□□□□□ -2.09
PTCD3-209ENST00000472044 OR2AG1Q9H205 316 aa2□□□□□ -2.09
PTCD3-209ENST00000472044 OR51B5Q9H339 312 aa2□□□□□ -2.09
PTCD3-209ENST00000472044 ARMC7Q9H6L4 198 aa2□□□□□ -2.09
PTCD3-209ENST00000472044 FANCEQ9HB96 536 aa2□□□□□ -2.09
PTCD3-209ENST00000472044 ADA2Q9NZK5 511 aa2□□□□□ -2.09
PTCD3-209ENST00000472044 FARSAQ9Y285 508 aaKnown RBP2□□□□□ -2.09
PTCD3-209ENST00000472044 ARPC4-TTLL3A0A0A6YYG9 625 aa1.99□□□□□ -2.09
PTCD3-209ENST00000472044 ZNF98A6NK75 572 aa1.99□□□□□ -2.09
PTCD3-209ENST00000472044 MYL12BO14950 172 aa1.99□□□□□ -2.09
PTCD3-209ENST00000472044 POLR1CO15160 346 aaPredicted RBP1.99□□□□□ -2.09
PTCD3-209ENST00000472044 OR7C2O60412 319 aa1.99□□□□□ -2.09
PTCD3-209ENST00000472044 CCDC22O60826 627 aa1.99□□□□□ -2.09
PTCD3-209ENST00000472044 SCO1O75880 301 aa1.99□□□□□ -2.09
PTCD3-209ENST00000472044 MPV17P39210 176 aa1.99□□□□□ -2.09
PTCD3-209ENST00000472044 PSMD4P55036 377 aaKnown RBP1.99□□□□□ -2.09
PTCD3-209ENST00000472044 MAD2L1BPQ15013 274 aaPredicted RBP1.99□□□□□ -2.09
PTCD3-209ENST00000472044 LUZP6Q538Z0 58 aa1.99□□□□□ -2.09
PTCD3-209ENST00000472044 PRSS54Q6PEW0 395 aa1.99□□□□□ -2.09
PTCD3-209ENST00000472044 DEGS2Q6QHC5 323 aa1.99□□□□□ -2.09
PTCD3-209ENST00000472044 SPINT4Q6UDR6 99 aa1.99□□□□□ -2.09
PTCD3-209ENST00000472044 VTCN1Q7Z7D3 282 aa1.99□□□□□ -2.09
PTCD3-209ENST00000472044 SLC25A29Q8N8R3 303 aa1.99□□□□□ -2.09
PTCD3-209ENST00000472044 OR1S1Q8NH92 325 aa1.99□□□□□ -2.09
PTCD3-209ENST00000472044 RXFP2Q8WXD0 754 aa1.99□□□□□ -2.09
PTCD3-209ENST00000472044 BAALCQ8WXS3 180 aa1.99□□□□□ -2.09
PTCD3-209ENST00000472044 TOP1MTQ969P6 601 aa1.99□□□□□ -2.09
PTCD3-209ENST00000472044 S100PBPQ96BU1 408 aa1.99□□□□□ -2.09
PTCD3-209ENST00000472044 WDR34Q96EX3 536 aa1.99□□□□□ -2.09
PTCD3-209ENST00000472044 MRPL48Q96GC5 212 aaKnown RBP1.99□□□□□ -2.09
PTCD3-209ENST00000472044 SNF8Q96H20 258 aa1.99□□□□□ -2.09
PTCD3-209ENST00000472044 ZFP3Q96NJ6 502 aa1.99□□□□□ -2.09
PTCD3-209ENST00000472044 NAPGQ99747 312 aaPredicted RBP1.99□□□□□ -2.09
PTCD3-209ENST00000472044 TMEM175Q9BSA9 504 aa1.99□□□□□ -2.09
PTCD3-209ENST00000472044 CSNK1G1Q9HCP0 422 aa1.99□□□□□ -2.09
PTCD3-209ENST00000472044 IL37Q9NZH6 218 aa1.99□□□□□ -2.09
PTCD3-209ENST00000472044 VAX2Q9UIW0 290 aa1.99□□□□□ -2.09
PTCD3-209ENST00000472044 ADGRL1O94910 1474 aa1.99□□□□□ -2.09
PTCD3-209ENST00000472044 ISPDA4D126 451 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms