RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 GRB7Q14451 532 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 SPA17Q15506 151 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 VPS26BQ4G0F5 336 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 PDZD11Q5EBL8 140 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 LIPKQ5VXJ0 399 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 RESP18Q5W5W9 173 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 FAM45BPQ6NSW5 357 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 IGFL1Q6UW32 110 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 FAM131AQ6UXB0 335 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 TMEM179Q6ZVK1 233 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 AHSA2Q719I0 299 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 COX15Q7KZN9 410 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 GDPD3Q7L5L3 318 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 DHDDSQ86SQ9 333 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 TMEM135Q86UB9 458 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 NRMQ8IXM6 262 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 TMEM161BQ8NDZ6 487 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 OR5AU1Q8NGC0 362 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 OR4D5Q8NGN0 318 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 OR4A4PQ8NGN8 299 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 STOML3Q8TAV4 291 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 MAGEE2Q8TD90 523 aaPredicted RBP2.45□□□□□ -2.02
CD46-213ENST00000471987 CASTOR1Q8WTX7 329 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 CA5BP1Q8WTZ4 195 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 DEDD2Q8WXF8 326 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 FAM3CQ92520 227 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 RORBQ92753 470 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 EXOSC8Q96B26 276 aaKnown RBP2.45□□□□□ -2.02
CD46-213ENST00000471987 CREB3L1Q96BA8 519 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 Q96MT0 163 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 RNF2Q99496 336 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 UGT1A10Q9HAW8 530 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 PLEKHA1Q9HB21 404 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 FGFR1OP2Q9NVK5 253 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 COA4Q9NYJ1 87 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 VAPAQ9P0L0 249 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 FZR1Q9UM11 496 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 SAMD4AQ9UPU9 718 aaKnown RBP2.45□□□□□ -2.02
CD46-213ENST00000471987 ASB4Q9Y574 426 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 FAM135AQ9P2D6 1515 aa2.45□□□□□ -2.02
CD46-213ENST00000471987 RRBP1Q9P2E9 1410 aaKnown RBP2.44□□□□□ -2.02
CD46-213ENST00000471987 PP2D1A8MPX8 630 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 OR11H12B2RN74 326 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 FAM25AB3EWG3 89 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 FAM25CB3EWG5 89 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 FAM25GB3EWG6 89 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 DISC1C4P0D8 188 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 H3BMH7 237 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 DCTN6O00399 190 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 KPNA4O00629 521 aaPredicted RBP2.44□□□□□ -2.02
CD46-213ENST00000471987 BHLHE40O14503 412 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 TGOLN2O43493 480 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 CHST1O43916 411 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 SLC19A2O60779 497 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 FCN3O75636 299 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 RCBTB2O95199 551 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 CLDN9O95484 217 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 AP2A1O95782 977 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 ORM1P02763 201 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 IFNA4P05014 189 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 ALDOBP05062 364 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 PCCAP05165 728 aaPredicted RBP2.44□□□□□ -2.02
CD46-213ENST00000471987 C2P06681 752 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 IVDP26440 423 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 PRDX3P30048 256 aaKnown RBP2.44□□□□□ -2.02
CD46-213ENST00000471987 HSPA9P38646 679 aaKnown RBP2.44□□□□□ -2.02
CD46-213ENST00000471987 CEACAM6P40199 344 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 PRLHRP49683 370 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 EMDP50402 254 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 ZNF136P52737 540 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 ATP1B3P54709 279 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 APOC4P55056 127 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 RANP62826 216 aaKnown RBP2.44□□□□□ -2.02
CD46-213ENST00000471987 ZP4Q12836 540 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 TPBGQ13641 420 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 APOFQ13790 326 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 MAPK14Q16539 360 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 DGUOKQ16854 277 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 ACSF3Q4G176 576 aaPredicted RBP2.44□□□□□ -2.02
CD46-213ENST00000471987 SAMD4BQ5PRF9 694 aaKnown RBP2.44□□□□□ -2.02
CD46-213ENST00000471987 RBM48Q5RL73 367 aaKnown RBP2.44□□□□□ -2.02
CD46-213ENST00000471987 TIMM23BQ5SRD1 257 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 TPRG1LQ5T0D9 272 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 N4BP2L1Q5TBK1 243 aaPredicted RBP2.44□□□□□ -2.02
CD46-213ENST00000471987 C22orf42Q6IC83 251 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 LEG1Q6P5S2 330 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 DHRS4L2Q6PKH6 230 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 ZNF836Q6ZNA1 936 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 SSX6Q7RTT6 188 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 PEX26Q7Z412 305 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 TMEM144Q7Z5S9 345 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 S100A7AQ86SG5 101 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 UNC93AQ86WB7 457 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 ANGPTL5Q86XS5 388 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 TMEM25Q86YD3 366 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 RIMKLAQ8IXN7 391 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 IFT20Q8IY31 132 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 LGI3Q8N145 548 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 JAGN1Q8N5M9 183 aa2.44□□□□□ -2.02
CD46-213ENST00000471987 TMEM252Q8N6L7 170 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms