RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 PTTG3PQ9NZH4 202 aa8.1□□□□□ -1.11
VPS52-216ENST00000471309 EIF3KQ9UBQ5 218 aaKnown RBP8.1□□□□□ -1.11
VPS52-216ENST00000471309 STARD10Q9Y365 291 aa8.1□□□□□ -1.11
VPS52-216ENST00000471309 A0A0G2JNJ9 132 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 METTL21EPA6NDL7 271 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 GABARAPH6UMI1 98 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 EEF1E1O43324 174 aaKnown RBP8.09□□□□□ -1.11
VPS52-216ENST00000471309 GMDSO60547 372 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 KDM4BO94953 1096 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 NRASP01111 189 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 BMP5P22003 454 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 INPP1P49441 399 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 RBP2P50120 134 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 PRSS12P56730 875 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 ZP1P60852 638 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 DGCR2P98153 550 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 UNC119Q13432 240 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 TAB1Q15750 504 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 FAM189A2Q15884 450 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 C3orf36Q3SXR2 165 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 PLCXD3Q63HM9 321 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 RAB12Q6IQ22 244 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 GLIPR1L1Q6UWM5 242 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 UNQ6126/PRO20091Q6UXV3 157 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 FBXW12Q6X9E4 464 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 DNM1P46Q6ZS02 220 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 RNF144BQ7Z419 303 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 IZUMO1Q8IYV9 350 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 ST6GALNAC3Q8NDV1 305 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 C19orf18Q8NEA5 215 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 OR56B2PQ8NGI1 322 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 KCNG3Q8TAE7 436 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 NPRL2Q8WTW4 380 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 YIPF5Q969M3 257 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 PHF21AQ96BD5 680 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 BORCS8Q96FH0 119 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 COX4I2Q96KJ9 171 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 SPACA5Q96QH8 159 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 DMRTA2Q96SC8 542 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 USB1Q9BQ65 265 aaKnown RBP8.09□□□□□ -1.11
VPS52-216ENST00000471309 VKORC1Q9BQB6 163 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 SLC22A4Q9H015 551 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 ATG5Q9H1Y0 275 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 POFUT1Q9H488 388 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 ELOVL5Q9NYP7 299 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 JKAMPQ9P055 326 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 Q9UFV3 132 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 RAB22AQ9UL26 194 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 MRPS7Q9Y2R9 242 aaKnown RBP8.09□□□□□ -1.11
VPS52-216ENST00000471309 SLC25A15Q9Y619 301 aa8.09□□□□□ -1.11
VPS52-216ENST00000471309 LOC400499M0QZD8 3231 aa8.08□□□□□ -1.12
VPS52-216ENST00000471309 IGHV1-18A0A0C4DH31 117 aa8.08□□□□□ -1.12
VPS52-216ENST00000471309 CD300LBA8K4G0 201 aa8.08□□□□□ -1.12
VPS52-216ENST00000471309 EEF1E1-BLOC1S5C9J1V9 151 aa8.08□□□□□ -1.12
VPS52-216ENST00000471309 ERVH48-1M5A8F1 160 aa8.08□□□□□ -1.12
VPS52-216ENST00000471309 PLA2G10O15496 165 aa8.08□□□□□ -1.12
VPS52-216ENST00000471309 CDC14BO60729 498 aa8.08□□□□□ -1.12
VPS52-216ENST00000471309 AGFG2O95081 481 aa8.08□□□□□ -1.12
VPS52-216ENST00000471309 CECR9P0C854 216 aa8.08□□□□□ -1.12
VPS52-216ENST00000471309 ZNF35P13682 527 aa8.08□□□□□ -1.12
VPS52-216ENST00000471309 TUBG1P23258 451 aa8.08□□□□□ -1.12
VPS52-216ENST00000471309 PTGFRP43088 359 aa8.08□□□□□ -1.12
VPS52-216ENST00000471309 FUT6P51993 359 aa8.08□□□□□ -1.12
VPS52-216ENST00000471309 CASP6P55212 293 aa8.08□□□□□ -1.12
VPS52-216ENST00000471309 MTCP1P56278 107 aa8.08□□□□□ -1.12
VPS52-216ENST00000471309 PPP1CBP62140 327 aa8.08□□□□□ -1.12
VPS52-216ENST00000471309 PRDX4Q13162 271 aa8.08□□□□□ -1.12
VPS52-216ENST00000471309 HLXQ14774 488 aaPredicted RBP8.08□□□□□ -1.12
VPS52-216ENST00000471309 TMEM211Q6ICI0 200 aa8.08□□□□□ -1.12
VPS52-216ENST00000471309 CDH24Q86UP0 819 aa8.08□□□□□ -1.12
VPS52-216ENST00000471309 STEAP2Q8NFT2 490 aa8.08□□□□□ -1.12
VPS52-216ENST00000471309 TNFAIP8L1Q8WVP5 186 aa8.08□□□□□ -1.12
VPS52-216ENST00000471309 FCAMRQ8WWV6 532 aa8.08□□□□□ -1.12
VPS52-216ENST00000471309 FAM46BQ96A09 425 aa8.08□□□□□ -1.12
VPS52-216ENST00000471309 S100PBPQ96BU1 408 aa8.08□□□□□ -1.12
VPS52-216ENST00000471309 ITPKCQ96DU7 683 aa8.08□□□□□ -1.12
VPS52-216ENST00000471309 WBP1Q96G27 269 aa8.08□□□□□ -1.12
VPS52-216ENST00000471309 ZC3HAV1LQ96H79 300 aaKnown RBP8.08□□□□□ -1.12
VPS52-216ENST00000471309 PAPOLGQ9BWT3 736 aaKnown RBP8.08□□□□□ -1.12
VPS52-216ENST00000471309 C11orf54Q9H0W9 315 aaPredicted RBP8.08□□□□□ -1.12
VPS52-216ENST00000471309 CST11Q9H112 138 aa8.08□□□□□ -1.12
VPS52-216ENST00000471309 OR10A4Q9H209 315 aa8.08□□□□□ -1.12
VPS52-216ENST00000471309 AUNIPQ9H7T9 357 aa8.08□□□□□ -1.12
VPS52-216ENST00000471309 TUBG2Q9NRH3 451 aa8.08□□□□□ -1.12
VPS52-216ENST00000471309 FAIMQ9NVQ4 179 aa8.08□□□□□ -1.12
VPS52-216ENST00000471309 GPR160Q9UJ42 338 aa8.08□□□□□ -1.12
VPS52-216ENST00000471309 SH3BGRL2Q9UJC5 107 aa8.08□□□□□ -1.12
VPS52-216ENST00000471309 SLC7A11Q9UPY5 501 aa8.08□□□□□ -1.12
VPS52-216ENST00000471309 RBMX2Q9Y388 322 aaKnown RBP8.08□□□□□ -1.12
VPS52-216ENST00000471309 IGKV1-27A0A075B6S5 117 aa8.07□□□□□ -1.12
VPS52-216ENST00000471309 TRAV18A0A075B6X5 111 aa8.07□□□□□ -1.12
VPS52-216ENST00000471309 FAM230AA0A1W2PPH8 454 aa8.07□□□□□ -1.12
VPS52-216ENST00000471309 ZNF850A8MQ14 1090 aa8.07□□□□□ -1.12
VPS52-216ENST00000471309 LYRM1O43325 122 aa8.07□□□□□ -1.12
VPS52-216ENST00000471309 LANCL1O43813 399 aa8.07□□□□□ -1.12
VPS52-216ENST00000471309 SSX4O60224 188 aa8.07□□□□□ -1.12
VPS52-216ENST00000471309 CD3GP09693 182 aa8.07□□□□□ -1.12
VPS52-216ENST00000471309 SELEP16581 610 aa8.07□□□□□ -1.12
VPS52-216ENST00000471309 CCKARP32238 428 aa8.07□□□□□ -1.12
VPS52-216ENST00000471309 CA7P43166 264 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms