RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 J3QKU1 62 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 M0R1B8 84 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 CCRL2O00421 344 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 SLC22A1O15245 554 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 OGG1O15527 345 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 ZNF254O75437 659 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 NCR1O76036 304 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 ZFPL1O95159 310 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 TTRP02766 147 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 MT-ND5P03915 603 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 COX5BP10606 129 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 ZNF35P13682 527 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 IGFBP2P18065 325 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 CELP19835 753 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 CCNOP22674 350 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 DCTDP32321 178 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 MAGEB1P43366 347 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 CX3CR1P49238 355 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 PSMD7P51665 324 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 RIDAP52758 137 aaKnown RBP4.06□□□□□ -1.76
SF3B1-208ENST00000470268 RAP2BP61225 183 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 SORDQ00796 357 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 FABP5Q01469 135 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 ACSM1Q08AH1 577 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 HABP2Q14520 560 aaPredicted RBP4.06□□□□□ -1.76
SF3B1-208ENST00000470268 CDK5R1Q15078 307 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 ODF4Q2M2E3 257 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 WDR38Q5JTN6 314 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 DMKNQ6E0U4 476 aaPredicted RBP4.06□□□□□ -1.76
SF3B1-208ENST00000470268 C22orf42Q6IC83 251 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 TMEM53Q6P2H8 277 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 TMPRSS11AQ6ZMR5 421 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 COLCA1Q6ZS62 124 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 RFPL4BQ6ZWI9 263 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 KCTD20Q7Z5Y7 419 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 DPPA2Q7Z7J5 298 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 CATSPERDQ86XM0 798 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.06□□□□□ -1.76
SF3B1-208ENST00000470268 PHC2Q8IXK0 858 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 ZNF283Q8N7M2 679 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 OR2G2Q8NGZ5 317 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 OR10AC1Q8NH08 325 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 RPS4Y2Q8TD47 263 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 RGP1Q92546 391 aaPredicted RBP4.06□□□□□ -1.76
SF3B1-208ENST00000470268 MUCL1Q96DR8 90 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 PGLYRP3Q96LB9 341 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 C4orf45Q96LM5 186 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 COQ7Q99807 217 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 PDCD1LG2Q9BQ51 273 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 MED18Q9BUE0 208 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 TMED9Q9BVK6 235 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 C6orf62Q9GZU0 229 aaPredicted RBP4.06□□□□□ -1.76
SF3B1-208ENST00000470268 OR10A4Q9H209 315 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 PPIL3Q9H2H8 161 aaKnown RBP4.06□□□□□ -1.76
SF3B1-208ENST00000470268 ATPIF1Q9UII2 106 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 R4GMQ9 66 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 PCNX1Q96RV3 2341 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 PRR14LQ5THK1 2151 aa4.06□□□□□ -1.76
SF3B1-208ENST00000470268 IGHV2OR16-5A0A0B4J2B6 119 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 IQCMA0A1B0GVH7 501 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 TUBAL3A6NHL2 446 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 OR4C45A6NMZ5 311 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 LOC110117498-PIK3R3F6TDL0 507 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 H3BSH0 61 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 CTDSP2O14595 271 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 PLPP2O43688 288 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 CLDN1O95832 211 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 IGLV3-1P01715 115 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 LOXP28300 417 aaPredicted RBP4.05□□□□□ -1.76
SF3B1-208ENST00000470268 HSD11B1P28845 292 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 GDI2P50395 445 aaKnown RBP4.05□□□□□ -1.76
SF3B1-208ENST00000470268 ERVS71-1P61550 626 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 RPS11P62280 158 aaKnown RBP eCLIP4.05□□□□□ -1.76
SF3B1-208ENST00000470268 GRB2P62993 217 aaKnown RBP4.05□□□□□ -1.76
SF3B1-208ENST00000470268 NAAAQ02083 359 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 ECH1Q13011 328 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 MLLT11Q13015 90 aaPredicted RBP4.05□□□□□ -1.76
SF3B1-208ENST00000470268 TNK1Q13470 666 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 DCTN2Q13561 401 aaKnown RBP4.05□□□□□ -1.76
SF3B1-208ENST00000470268 TPBGQ13641 420 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 ALKBH1Q13686 389 aaKnown RBP4.05□□□□□ -1.76
SF3B1-208ENST00000470268 TAF13Q15543 124 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 TMEM255AQ5JRV8 349 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 FAM27D1Q5T7N8 215 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 CFAP161Q6P656 301 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 DRAM2Q6UX65 266 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 FAM57BQ71RH2 274 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 FAM220AQ7Z4H9 259 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 OR2C3Q8N628 320 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 ACBD4Q8NC06 268 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 OR8B12Q8NGG6 310 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 OR51A4Q8NGJ6 313 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 OR6Q1Q8NGQ2 317 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 OR13C5Q8NGS8 318 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 OR2AE1Q8NHA4 323 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 SSC4DQ8WTU2 575 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 FCGR1BQ92637 280 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 GHSRQ92847 366 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 ORAI1Q96D31 301 aa4.05□□□□□ -1.76
SF3B1-208ENST00000470268 LYZL4Q96KX0 146 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms