RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 PRDM13Q9H4Q3 707 aa12.3□□□□□ -0.44
GPC1-208ENST00000469694 MED12Q93074 2177 aa12.3□□□□□ -0.44
GPC1-208ENST00000469694 EP300Q09472 2414 aaPredicted RBP12.3□□□□□ -0.44
GPC1-208ENST00000469694 AHCTF1Q8WYP5 2266 aa12.3□□□□□ -0.44
GPC1-208ENST00000469694 IFNA17P01571 189 aa12.3□□□□□ -0.44
GPC1-208ENST00000469694 CDX1P47902 265 aaPredicted RBP12.3□□□□□ -0.44
GPC1-208ENST00000469694 ID4P47928 161 aa12.3□□□□□ -0.44
GPC1-208ENST00000469694 ZFP36L1Q07352 338 aaKnown RBP12.3□□□□□ -0.44
GPC1-208ENST00000469694 EIF2B1Q14232 305 aaKnown RBP12.3□□□□□ -0.44
GPC1-208ENST00000469694 MOGAT2Q3SYC2 334 aa12.3□□□□□ -0.44
GPC1-208ENST00000469694 EEF1A1P5Q5VTE0 462 aa12.3□□□□□ -0.44
GPC1-208ENST00000469694 NSUN5P2Q63ZY6 315 aa12.3□□□□□ -0.44
GPC1-208ENST00000469694 CPNE4Q96A23 557 aaPredicted RBP12.3□□□□□ -0.44
GPC1-208ENST00000469694 DCBLD2Q96PD2 775 aa12.3□□□□□ -0.44
GPC1-208ENST00000469694 OR11A1Q9GZK7 315 aa12.3□□□□□ -0.44
GPC1-208ENST00000469694 RGCCQ9H4X1 137 aa12.3□□□□□ -0.44
GPC1-208ENST00000469694 MMP25Q9NPA2 562 aa12.3□□□□□ -0.44
GPC1-208ENST00000469694 OR5AC2Q9NZP5 309 aa12.3□□□□□ -0.44
GPC1-208ENST00000469694 LAMP5Q9UJQ1 280 aa12.3□□□□□ -0.44
GPC1-208ENST00000469694 TMEM235A6NFC5 223 aa12.29□□□□□ -0.44
GPC1-208ENST00000469694 M0R036 132 aa12.29□□□□□ -0.44
GPC1-208ENST00000469694 ADAM10O14672 748 aa12.29□□□□□ -0.44
GPC1-208ENST00000469694 SLC31A2O15432 143 aa12.29□□□□□ -0.44
GPC1-208ENST00000469694 IFNA2P01563 188 aa12.29□□□□□ -0.44
GPC1-208ENST00000469694 FGF5P12034 268 aa12.29□□□□□ -0.44
GPC1-208ENST00000469694 HTR2CP28335 458 aa12.29□□□□□ -0.44
GPC1-208ENST00000469694 RBP2P50120 134 aa12.29□□□□□ -0.44
GPC1-208ENST00000469694 SLC25A1P53007 311 aa12.29□□□□□ -0.44
GPC1-208ENST00000469694 EIF5AP63241 154 aaKnown RBP12.29□□□□□ -0.44
GPC1-208ENST00000469694 BHLHE23Q8NDY6 225 aa12.29□□□□□ -0.44
GPC1-208ENST00000469694 ROBO4Q8WZ75 1007 aa12.29□□□□□ -0.44
GPC1-208ENST00000469694 SLC25A36Q96CQ1 311 aa12.29□□□□□ -0.44
GPC1-208ENST00000469694 C4orf45Q96LM5 186 aa12.29□□□□□ -0.44
GPC1-208ENST00000469694 TAF9BQ9HBM6 251 aa12.29□□□□□ -0.44
GPC1-208ENST00000469694 SHISA8B8ZZ34 492 aa12.29□□□□□ -0.44
GPC1-208ENST00000469694 OR2J2O76002 312 aa12.29□□□□□ -0.44
GPC1-208ENST00000469694 ARG1P05089 322 aa12.29□□□□□ -0.44
GPC1-208ENST00000469694 OR8U9P0C7N5 309 aa12.29□□□□□ -0.44
GPC1-208ENST00000469694 PNMTP11086 282 aa12.29□□□□□ -0.44
GPC1-208ENST00000469694 TAS2R60P59551 318 aa12.29□□□□□ -0.44
GPC1-208ENST00000469694 WDR38Q5JTN6 314 aa12.29□□□□□ -0.44
GPC1-208ENST00000469694 MRPL14Q6P1L8 145 aaKnown RBP12.29□□□□□ -0.44
GPC1-208ENST00000469694 OR8U1Q8NH10 309 aa12.29□□□□□ -0.44
GPC1-208ENST00000469694 LYPD6BQ8NI32 183 aa12.29□□□□□ -0.44
GPC1-208ENST00000469694 RNF128Q8TEB7 428 aa12.29□□□□□ -0.44
GPC1-208ENST00000469694 THRSPQ92748 146 aa12.29□□□□□ -0.44
GPC1-208ENST00000469694 C20orf24Q9BUV8 137 aa12.29□□□□□ -0.44
GPC1-208ENST00000469694 PLA2G2EQ9NZK7 142 aa12.29□□□□□ -0.44
GPC1-208ENST00000469694 PPP4R1LQ9P1A2 415 aa12.29□□□□□ -0.44
GPC1-208ENST00000469694 A0A0A6YYH2 397 aa12.28□□□□□ -0.44
GPC1-208ENST00000469694 A6NJ64 397 aa12.28□□□□□ -0.44
GPC1-208ENST00000469694 ALOX5APP20292 161 aa12.28□□□□□ -0.44
GPC1-208ENST00000469694 CXCR1P25024 350 aa12.28□□□□□ -0.44
GPC1-208ENST00000469694 MAS1LP35410 378 aa12.28□□□□□ -0.44
GPC1-208ENST00000469694 GRK6P43250 576 aa12.28□□□□□ -0.44
GPC1-208ENST00000469694 SULT1A1P50225 295 aa12.28□□□□□ -0.44
GPC1-208ENST00000469694 DUSP3P51452 185 aaPredicted RBP12.28□□□□□ -0.44
GPC1-208ENST00000469694 EGR3Q06889 387 aa12.28□□□□□ -0.44
GPC1-208ENST00000469694 GLYATL3Q5SZD4 288 aa12.28□□□□□ -0.44
GPC1-208ENST00000469694 RPL7L1Q6DKI1 246 aaKnown RBP12.28□□□□□ -0.44
GPC1-208ENST00000469694 OR56B1Q8NGI3 324 aa12.28□□□□□ -0.44
GPC1-208ENST00000469694 VDAC3Q9Y277 283 aa12.28□□□□□ -0.44
GPC1-208ENST00000469694 B3GALT1Q9Y5Z6 326 aa12.28□□□□□ -0.44
GPC1-208ENST00000469694 MRPS18BQ9Y676 258 aaKnown RBP12.28□□□□□ -0.44
GPC1-208ENST00000469694 SDK2Q58EX2 2172 aa12.28□□□□□ -0.44
GPC1-208ENST00000469694 DMXL1Q9Y485 3027 aa12.28□□□□□ -0.44
GPC1-208ENST00000469694 PLGP00747 810 aaPredicted RBP12.28□□□□□ -0.44
GPC1-208ENST00000469694 NDUFB7P17568 137 aa12.28□□□□□ -0.44
GPC1-208ENST00000469694 S100A2P29034 98 aa12.28□□□□□ -0.44
GPC1-208ENST00000469694 SLC26A5P58743 744 aa12.28□□□□□ -0.44
GPC1-208ENST00000469694 RPS4XP62701 263 aaKnown RBP12.28□□□□□ -0.44
GPC1-208ENST00000469694 IL11RAQ14626 422 aa12.28□□□□□ -0.44
GPC1-208ENST00000469694 ZNF239Q16600 458 aaKnown RBP12.28□□□□□ -0.44
GPC1-208ENST00000469694 REC114Q7Z4M0 266 aa12.28□□□□□ -0.44
GPC1-208ENST00000469694 ZNF565Q8N9K5 539 aa12.28□□□□□ -0.44
GPC1-208ENST00000469694 MEGF10Q96KG7 1140 aa12.28□□□□□ -0.44
GPC1-208ENST00000469694 PARPBPQ9NWS1 579 aa12.28□□□□□ -0.44
GPC1-208ENST00000469694 GFOD1Q9NXC2 390 aa12.28□□□□□ -0.44
GPC1-208ENST00000469694 STARD10Q9Y365 291 aa12.28□□□□□ -0.44
GPC1-208ENST00000469694 PTRH2Q9Y3E5 179 aaKnown RBP12.28□□□□□ -0.44
GPC1-208ENST00000469694 KNTC1P50748 2209 aa12.28□□□□□ -0.44
GPC1-208ENST00000469694 C11orf98E9PRG8 122 aa12.28□□□□□ -0.44
GPC1-208ENST00000469694 LDLRAD4O15165 306 aa12.28□□□□□ -0.44
GPC1-208ENST00000469694 CSTBP04080 98 aaKnown RBP12.28□□□□□ -0.44
GPC1-208ENST00000469694 HIST1H1BP16401 226 aaKnown RBP12.28□□□□□ -0.44
GPC1-208ENST00000469694 Q6ZRG5 221 aa12.28□□□□□ -0.44
GPC1-208ENST00000469694 GPX7Q96SL4 187 aaPredicted RBP12.28□□□□□ -0.44
GPC1-208ENST00000469694 ZNF587Q96SQ5 575 aaPredicted RBP12.28□□□□□ -0.44
GPC1-208ENST00000469694 GAR1Q9NY12 217 aaKnown RBP12.28□□□□□ -0.44
GPC1-208ENST00000469694 TERTO14746 1132 aaKnown RBP12.27□□□□□ -0.45
GPC1-208ENST00000469694 UMODP07911 640 aa12.27□□□□□ -0.45
GPC1-208ENST00000469694 CTXN1P60606 82 aa12.27□□□□□ -0.45
GPC1-208ENST00000469694 PRPS1P60891 318 aa12.27□□□□□ -0.45
GPC1-208ENST00000469694 RPL18Q07020 188 aaKnown RBP12.27□□□□□ -0.45
GPC1-208ENST00000469694 KIAA0141Q14154 515 aaPredicted RBP12.27□□□□□ -0.45
GPC1-208ENST00000469694 ALG10Q5BKT4 473 aa12.27□□□□□ -0.45
GPC1-208ENST00000469694 DPY19L4Q7Z388 723 aa12.27□□□□□ -0.45
GPC1-208ENST00000469694 FJX1Q86VR8 437 aa12.27□□□□□ -0.45
GPC1-208ENST00000469694 OR10G3Q8NGC4 313 aa12.27□□□□□ -0.45
GPC1-208ENST00000469694 AQP3Q92482 292 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms