RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 SLC35F2Q8IXU6 374 aa14.21□□□□□ -0.13
SSBP1-207ENST00000468267 FAM216AQ8WUB2 273 aa14.21□□□□□ -0.13
SSBP1-207ENST00000468267 PYDC1Q8WXC3 89 aa14.21□□□□□ -0.13
SSBP1-207ENST00000468267 PIGCQ92535 297 aa14.21□□□□□ -0.13
SSBP1-207ENST00000468267 TECTBQ96PL2 329 aa14.21□□□□□ -0.13
SSBP1-207ENST00000468267 PKP2Q99959 881 aa14.21□□□□□ -0.13
SSBP1-207ENST00000468267 OSBPL10Q9BXB5 764 aa14.21□□□□□ -0.13
SSBP1-207ENST00000468267 GABARAPL3Q9BY60 117 aa14.21□□□□□ -0.13
SSBP1-207ENST00000468267 PBOV1Q9GZY1 135 aa14.21□□□□□ -0.13
SSBP1-207ENST00000468267 ESM1Q9NQ30 184 aa14.21□□□□□ -0.13
SSBP1-207ENST00000468267 IKZF2Q9UKS7 526 aa14.21□□□□□ -0.13
SSBP1-207ENST00000468267 IGHV3OR15-7A0A075B7D8 119 aa14.2□□□□□ -0.14
SSBP1-207ENST00000468267 SAC3D1A6NKF1 404 aa14.2□□□□□ -0.14
SSBP1-207ENST00000468267 TMEM210A6NLX4 147 aa14.2□□□□□ -0.14
SSBP1-207ENST00000468267 CDIPTO14735 213 aa14.2□□□□□ -0.14
SSBP1-207ENST00000468267 ENSAO43768 121 aaKnown RBP14.2□□□□□ -0.14
SSBP1-207ENST00000468267 IGHV4-38-2P0DP08 117 aa14.2□□□□□ -0.14
SSBP1-207ENST00000468267 MUC1P15941 1255 aaPredicted RBP14.2□□□□□ -0.14
SSBP1-207ENST00000468267 CXCR4P61073 352 aa14.2□□□□□ -0.14
SSBP1-207ENST00000468267 ACTR3P61158 418 aa14.2□□□□□ -0.14
SSBP1-207ENST00000468267 POU4F2Q12837 409 aa14.2□□□□□ -0.14
SSBP1-207ENST00000468267 MICBQ29980 383 aa14.2□□□□□ -0.14
SSBP1-207ENST00000468267 ZNF829Q3KNS6 432 aaPredicted RBP14.2□□□□□ -0.14
SSBP1-207ENST00000468267 ZDHHC23Q8IYP9 409 aa14.2□□□□□ -0.14
SSBP1-207ENST00000468267 BCL6BQ8N143 479 aaPredicted RBP14.2□□□□□ -0.14
SSBP1-207ENST00000468267 SIGLECL1Q8N7X8 197 aa14.2□□□□□ -0.14
SSBP1-207ENST00000468267 ZDHHC22Q8N966 263 aa14.2□□□□□ -0.14
SSBP1-207ENST00000468267 FAM81AQ8TBF8 368 aa14.2□□□□□ -0.14
SSBP1-207ENST00000468267 OR51E1Q8TCB6 317 aa14.2□□□□□ -0.14
SSBP1-207ENST00000468267 RNF170Q96K19 258 aa14.2□□□□□ -0.14
SSBP1-207ENST00000468267 APOL4Q9BPW4 351 aa14.2□□□□□ -0.14
SSBP1-207ENST00000468267 RBM4BQ9BQ04 359 aaKnown RBP14.2□□□□□ -0.14
SSBP1-207ENST00000468267 TTTY10Q9BZA0 68 aa14.2□□□□□ -0.14
SSBP1-207ENST00000468267 FGF23Q9GZV9 251 aaPredicted RBP14.2□□□□□ -0.14
SSBP1-207ENST00000468267 RASSF4Q9H2L5 321 aa14.2□□□□□ -0.14
SSBP1-207ENST00000468267 RIBC2Q9H4K1 309 aa14.2□□□□□ -0.14
SSBP1-207ENST00000468267 CLN6Q9NWW5 311 aa14.2□□□□□ -0.14
SSBP1-207ENST00000468267 KAAG1Q9UBP8 84 aa14.2□□□□□ -0.14
SSBP1-207ENST00000468267 NUFIP1Q9UHK0 495 aaKnown RBP14.2□□□□□ -0.14
SSBP1-207ENST00000468267 ZNF816-ZNF321PA0A0X1KG74 233 aa14.19□□□□□ -0.14
SSBP1-207ENST00000468267 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.19□□□□□ -0.14
SSBP1-207ENST00000468267 SRSF10O75494 262 aaKnown RBP14.19□□□□□ -0.14
SSBP1-207ENST00000468267 IGLV3-1P01715 115 aa14.19□□□□□ -0.14
SSBP1-207ENST00000468267 ATP6V1B1P15313 513 aa14.19□□□□□ -0.14
SSBP1-207ENST00000468267 RBMS3Q6XE24 437 aaKnown RBP14.19□□□□□ -0.14
SSBP1-207ENST00000468267 DOK3Q7L591 496 aa14.19□□□□□ -0.14
SSBP1-207ENST00000468267 SCCPDHQ8NBX0 429 aa14.19□□□□□ -0.14
SSBP1-207ENST00000468267 OR10Z1Q8NGY1 313 aa14.19□□□□□ -0.14
SSBP1-207ENST00000468267 HPSE2Q8WWQ2 592 aa14.19□□□□□ -0.14
SSBP1-207ENST00000468267 RPL3LQ92901 407 aaKnown RBP14.19□□□□□ -0.14
SSBP1-207ENST00000468267 PPP1R14AQ96A00 147 aa14.19□□□□□ -0.14
SSBP1-207ENST00000468267 HIST1H2AAQ96QV6 131 aa14.19□□□□□ -0.14
SSBP1-207ENST00000468267 SMURF1Q9HCE7 757 aa14.19□□□□□ -0.14
SSBP1-207ENST00000468267 GPR84Q9NQS5 396 aa14.19□□□□□ -0.14
SSBP1-207ENST00000468267 WARS2Q9UGM6 360 aaKnown RBP14.19□□□□□ -0.14
SSBP1-207ENST00000468267 SRRM5B3KS81 715 aa14.18□□□□□ -0.14
SSBP1-207ENST00000468267 ZNF670-ZNF695F2Z2N8 137 aa14.18□□□□□ -0.14
SSBP1-207ENST00000468267 H3BNX3 289 aa14.18□□□□□ -0.14
SSBP1-207ENST00000468267 TMPRSS2O15393 492 aa14.18□□□□□ -0.14
SSBP1-207ENST00000468267 MAGEB4O15481 346 aaPredicted RBP14.18□□□□□ -0.14
SSBP1-207ENST00000468267 FCN3O75636 299 aa14.18□□□□□ -0.14
SSBP1-207ENST00000468267 PLATP00750 562 aa14.18□□□□□ -0.14
SSBP1-207ENST00000468267 LIPFP07098 398 aa14.18□□□□□ -0.14
SSBP1-207ENST00000468267 HTR1FP30939 366 aa14.18□□□□□ -0.14
SSBP1-207ENST00000468267 FGF12P61328 243 aa14.18□□□□□ -0.14
SSBP1-207ENST00000468267 EGR3Q06889 387 aa14.18□□□□□ -0.14
SSBP1-207ENST00000468267 MFGE8Q08431 387 aaPredicted RBP14.18□□□□□ -0.14
SSBP1-207ENST00000468267 RIPPLY1Q0D2K3 151 aa14.18□□□□□ -0.14
SSBP1-207ENST00000468267 KPNB1Q14974 876 aaKnown RBP14.18□□□□□ -0.14
SSBP1-207ENST00000468267 C11orf91Q3C1V1 193 aa14.18□□□□□ -0.14
SSBP1-207ENST00000468267 ZBTB37Q5TC79 503 aa14.18□□□□□ -0.14
SSBP1-207ENST00000468267 C9orf139Q6ZV77 190 aa14.18□□□□□ -0.14
SSBP1-207ENST00000468267 KCTD8Q6ZWB6 473 aa14.18□□□□□ -0.14
SSBP1-207ENST00000468267 COMMD2Q86X83 199 aa14.18□□□□□ -0.14
SSBP1-207ENST00000468267 OR51G2Q8NGK0 314 aa14.18□□□□□ -0.14
SSBP1-207ENST00000468267 OR8J1Q8NGP2 316 aa14.18□□□□□ -0.14
SSBP1-207ENST00000468267 C12orf43Q96C57 262 aaKnown RBP14.18□□□□□ -0.14
SSBP1-207ENST00000468267 FAM71F1Q96KD3 344 aaPredicted RBP14.18□□□□□ -0.14
SSBP1-207ENST00000468267 MS4A7Q9GZW8 240 aaPredicted RBP14.18□□□□□ -0.14
SSBP1-207ENST00000468267 MRM2Q9UI43 246 aaKnown RBP14.18□□□□□ -0.14
SSBP1-207ENST00000468267 IGHV3OR16-10A0A075B7F0 116 aa14.17□□□□□ -0.14
SSBP1-207ENST00000468267 LOC110117498-PIK3R3F6TDL0 507 aa14.17□□□□□ -0.14
SSBP1-207ENST00000468267 DVL1O14640 695 aa14.17□□□□□ -0.14
SSBP1-207ENST00000468267 ECDO95905 644 aaPredicted RBP14.17□□□□□ -0.14
SSBP1-207ENST00000468267 TTRP02766 147 aa14.17□□□□□ -0.14
SSBP1-207ENST00000468267 ALPLP05186 524 aa14.17□□□□□ -0.14
SSBP1-207ENST00000468267 GPM6AP51674 278 aa14.17□□□□□ -0.14
SSBP1-207ENST00000468267 UBA52P62987 128 aaKnown RBP14.17□□□□□ -0.14
SSBP1-207ENST00000468267 ELF3P78545 371 aaPredicted RBP14.17□□□□□ -0.14
SSBP1-207ENST00000468267 CEACAM21Q3KPI0 293 aa14.17□□□□□ -0.14
SSBP1-207ENST00000468267 WDR38Q5JTN6 314 aa14.17□□□□□ -0.14
SSBP1-207ENST00000468267 ZFP1Q6P2D0 407 aa14.17□□□□□ -0.14
SSBP1-207ENST00000468267 THAP5Q7Z6K1 395 aa14.17□□□□□ -0.14
SSBP1-207ENST00000468267 PNLDC1Q8NA58 520 aaKnown RBP14.17□□□□□ -0.14
SSBP1-207ENST00000468267 SEH1LQ96EE3 360 aa14.17□□□□□ -0.14
SSBP1-207ENST00000468267 ZNF48Q96MX3 618 aaPredicted RBP14.17□□□□□ -0.14
SSBP1-207ENST00000468267 CCL13Q99616 98 aa14.17□□□□□ -0.14
SSBP1-207ENST00000468267 MOB1AQ9H8S9 216 aa14.17□□□□□ -0.14
SSBP1-207ENST00000468267 PIGLQ9Y2B2 252 aa14.17□□□□□ -0.14
SSBP1-207ENST00000468267 R4GMQ9 66 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms