RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 CDH26Q8IXH8 852 aa15.9■□□□□ 0.14
COL9A3-205ENST00000466192 CPEB3Q8NE35 698 aaKnown RBP15.9■□□□□ 0.14
COL9A3-205ENST00000466192 OR5D18Q8NGL1 313 aa15.9■□□□□ 0.14
COL9A3-205ENST00000466192 ZFAND1Q8TCF1 268 aa15.9■□□□□ 0.14
COL9A3-205ENST00000466192 C1orf147Q96MC9 270 aaPredicted RBP15.9■□□□□ 0.14
COL9A3-205ENST00000466192 GON7Q9BXV9 100 aa15.9■□□□□ 0.14
COL9A3-205ENST00000466192 UPB1Q9UBR1 384 aa15.9■□□□□ 0.14
COL9A3-205ENST00000466192 BOD1L1Q8NFC6 3051 aa15.9■□□□□ 0.14
COL9A3-205ENST00000466192 SPTBN2O15020 2390 aa15.9■□□□□ 0.14
COL9A3-205ENST00000466192 A0A1W2PP11 408 aa15.9■□□□□ 0.14
COL9A3-205ENST00000466192 SLC22A20A6NK97 555 aa15.9■□□□□ 0.14
COL9A3-205ENST00000466192 MTRF1O75570 445 aaKnown RBP15.9■□□□□ 0.14
COL9A3-205ENST00000466192 RLN1P04808 185 aa15.9■□□□□ 0.14
COL9A3-205ENST00000466192 GNB3P16520 340 aa15.9■□□□□ 0.14
COL9A3-205ENST00000466192 CRIP3Q6Q6R5 217 aa15.9■□□□□ 0.14
COL9A3-205ENST00000466192 RTN4RL2Q86UN3 420 aa15.9■□□□□ 0.14
COL9A3-205ENST00000466192 ZNF100Q8IYN0 542 aa15.9■□□□□ 0.14
COL9A3-205ENST00000466192 TMEM229BQ8NBD8 167 aa15.9■□□□□ 0.14
COL9A3-205ENST00000466192 REEP6Q96HR9 211 aa15.9■□□□□ 0.14
COL9A3-205ENST00000466192 SELENOIQ9C0D9 397 aa15.9■□□□□ 0.14
COL9A3-205ENST00000466192 BANF2Q9H503 90 aa15.9■□□□□ 0.14
COL9A3-205ENST00000466192 ZNF69Q9UC07 566 aa15.9■□□□□ 0.14
COL9A3-205ENST00000466192 MGAQ8IWI9 3026 aa15.89■□□□□ 0.13
COL9A3-205ENST00000466192 RAB3DO95716 219 aa15.89■□□□□ 0.13
COL9A3-205ENST00000466192 MPIG6BO95866 241 aa15.89■□□□□ 0.13
COL9A3-205ENST00000466192 ACKR3P25106 362 aa15.89■□□□□ 0.13
COL9A3-205ENST00000466192 KISS1Q15726 138 aa15.89■□□□□ 0.13
COL9A3-205ENST00000466192 FJX1Q86VR8 437 aa15.89■□□□□ 0.13
COL9A3-205ENST00000466192 OR4S1Q8NGB4 309 aa15.89■□□□□ 0.13
COL9A3-205ENST00000466192 PP6455Q8WZ26 134 aa15.89■□□□□ 0.13
COL9A3-205ENST00000466192 HYLS1Q96M11 299 aa15.89■□□□□ 0.13
COL9A3-205ENST00000466192 CHST5Q9GZS9 411 aa15.89■□□□□ 0.13
COL9A3-205ENST00000466192 LPAR5Q9H1C0 372 aa15.89■□□□□ 0.13
COL9A3-205ENST00000466192 C12orf49Q9H741 205 aa15.89■□□□□ 0.13
COL9A3-205ENST00000466192 FBLN5Q9UBX5 448 aa15.89■□□□□ 0.13
COL9A3-205ENST00000466192 PRSS50Q9UI38 385 aa15.89■□□□□ 0.13
COL9A3-205ENST00000466192 ING4Q9UNL4 249 aa15.89■□□□□ 0.13
COL9A3-205ENST00000466192 MEIKINA0A087WXM9 373 aa15.89■□□□□ 0.13
COL9A3-205ENST00000466192 ERVH48-1M5A8F1 160 aa15.89■□□□□ 0.13
COL9A3-205ENST00000466192 ZNHIT1O43257 154 aa15.89■□□□□ 0.13
COL9A3-205ENST00000466192 PRF1P14222 555 aa15.89■□□□□ 0.13
COL9A3-205ENST00000466192 AGTR1P30556 359 aa15.89■□□□□ 0.13
COL9A3-205ENST00000466192 SNRPD2P62316 118 aaKnown RBP15.89■□□□□ 0.13
COL9A3-205ENST00000466192 ZNF584Q8IVC4 421 aa15.89■□□□□ 0.13
COL9A3-205ENST00000466192 CCDC54Q8NEL0 328 aa15.89■□□□□ 0.13
COL9A3-205ENST00000466192 OR52B4Q8NGK2 314 aa15.89■□□□□ 0.13
COL9A3-205ENST00000466192 OR10R2Q8NGX6 335 aa15.89■□□□□ 0.13
COL9A3-205ENST00000466192 NUDCD2Q8WVJ2 157 aa15.89■□□□□ 0.13
COL9A3-205ENST00000466192 TINAGL1Q9GZM7 467 aaPredicted RBP15.89■□□□□ 0.13
COL9A3-205ENST00000466192 LOC105371267A0A1B0GV96 52 aa15.88■□□□□ 0.13
COL9A3-205ENST00000466192 ZNF503-AS2A6NEH8 195 aa15.88■□□□□ 0.13
COL9A3-205ENST00000466192 ZNF736B4DX44 427 aaPredicted RBP15.88■□□□□ 0.13
COL9A3-205ENST00000466192 CDC14BO60729 498 aa15.88■□□□□ 0.13
COL9A3-205ENST00000466192 HLA-HP01893 362 aa15.88■□□□□ 0.13
COL9A3-205ENST00000466192 MECP2P51608 486 aaKnown RBP15.88■□□□□ 0.13
COL9A3-205ENST00000466192 PRSS12P56730 875 aa15.88■□□□□ 0.13
COL9A3-205ENST00000466192 SLC22A6Q4U2R8 563 aa15.88■□□□□ 0.13
COL9A3-205ENST00000466192 OR2W3Q7Z3T1 314 aa15.88■□□□□ 0.13
COL9A3-205ENST00000466192 TRAPPC6BQ86SZ2 158 aa15.88■□□□□ 0.13
COL9A3-205ENST00000466192 KCNG3Q8TAE7 436 aa15.88■□□□□ 0.13
COL9A3-205ENST00000466192 C10orf35Q96D05 121 aa15.88■□□□□ 0.13
COL9A3-205ENST00000466192 B3GNT2Q9NY97 397 aa15.88■□□□□ 0.13
COL9A3-205ENST00000466192 HSPB11Q9Y547 144 aa15.88■□□□□ 0.13
COL9A3-205ENST00000466192 A0A0A6YYD4 124 aa15.87■□□□□ 0.13
COL9A3-205ENST00000466192 AKR7A2O43488 359 aa15.87■□□□□ 0.13
COL9A3-205ENST00000466192 CREBL2O60519 120 aaPredicted RBP15.87■□□□□ 0.13
COL9A3-205ENST00000466192 CRTAPO75718 401 aaPredicted RBP15.87■□□□□ 0.13
COL9A3-205ENST00000466192 AMY2AP04746 511 aa15.87■□□□□ 0.13
COL9A3-205ENST00000466192 VSIG10L2P0DP72 767 aa15.87■□□□□ 0.13
COL9A3-205ENST00000466192 LAMTOR1Q6IAA8 161 aa15.87■□□□□ 0.13
COL9A3-205ENST00000466192 C1QL2Q7Z5L3 287 aa15.87■□□□□ 0.13
COL9A3-205ENST00000466192 GVQW1Q8N7I0 195 aa15.87■□□□□ 0.13
COL9A3-205ENST00000466192 PNLDC1Q8NA58 520 aaKnown RBP15.87■□□□□ 0.13
COL9A3-205ENST00000466192 SEMA6DQ8NFY4 1073 aa15.87■□□□□ 0.13
COL9A3-205ENST00000466192 TMEM59Q9BXS4 323 aa15.87■□□□□ 0.13
COL9A3-205ENST00000466192 PRDM14Q9GZV8 571 aa15.87■□□□□ 0.13
COL9A3-205ENST00000466192 GPN1Q9HCN4 374 aaPredicted RBP15.87■□□□□ 0.13
COL9A3-205ENST00000466192 NPDC1Q9NQX5 325 aaPredicted RBP15.87■□□□□ 0.13
COL9A3-205ENST00000466192 ZNF175Q9Y473 711 aa15.87■□□□□ 0.13
COL9A3-205ENST00000466192 SCGNO76038 276 aa15.87■□□□□ 0.13
COL9A3-205ENST00000466192 IL5P05113 134 aa15.87■□□□□ 0.13
COL9A3-205ENST00000466192 ZNF626Q68DY1 528 aa15.87■□□□□ 0.13
COL9A3-205ENST00000466192 PIGTQ969N2 578 aa15.87■□□□□ 0.13
COL9A3-205ENST00000466192 ZNF436Q9C0F3 470 aaPredicted RBP15.87■□□□□ 0.13
COL9A3-205ENST00000466192 DHRS7CA6NNS2 312 aa15.86■□□□□ 0.13
COL9A3-205ENST00000466192 SOCS1O15524 211 aa15.86■□□□□ 0.13
COL9A3-205ENST00000466192 CSN2P05814 226 aa15.86■□□□□ 0.13
COL9A3-205ENST00000466192 MELTFP08582 738 aa15.86■□□□□ 0.13
COL9A3-205ENST00000466192 FCGR2AP12318 317 aa15.86■□□□□ 0.13
COL9A3-205ENST00000466192 PTGFRP43088 359 aa15.86■□□□□ 0.13
COL9A3-205ENST00000466192 IDO2Q6ZQW0 420 aa15.86■□□□□ 0.13
COL9A3-205ENST00000466192 SLC36A1Q7Z2H8 476 aa15.86■□□□□ 0.13
COL9A3-205ENST00000466192 ARPC5LQ9BPX5 153 aa15.86■□□□□ 0.13
COL9A3-205ENST00000466192 RANBP3Q9H6Z4 567 aaPredicted RBP15.86■□□□□ 0.13
COL9A3-205ENST00000466192 DLL4Q9NR61 685 aa15.86■□□□□ 0.13
COL9A3-205ENST00000466192 LOC100509620A0A075B734 347 aa15.86■□□□□ 0.13
COL9A3-205ENST00000466192 KLK10O43240 276 aa15.86■□□□□ 0.13
COL9A3-205ENST00000466192 EDN3P14138 238 aa15.86■□□□□ 0.13
COL9A3-205ENST00000466192 OR52W1Q6IF63 320 aa15.86■□□□□ 0.13
COL9A3-205ENST00000466192 SEZ6L2Q6UXD5 910 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms