RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 OTPQ5XKR4 325 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 TMEM42Q69YG0 159 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 C22orf42Q6IC83 251 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 XKRXQ6PP77 449 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 PGAP1Q75T13 922 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 NAA40Q86UY6 237 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 MDP1Q86V88 176 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 LYPD6Q86Y78 171 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 LIX1LQ8IVB5 337 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 RELL2Q8NC24 303 aaPredicted RBP4.72□□□□□ -1.65
VPS41-211ENST00000466017 OR8B12Q8NGG6 310 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 OR5D14Q8NGL3 314 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 AKR7LQ8NHP1 331 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 NEU4Q8WWR8 484 aaPredicted RBP4.72□□□□□ -1.65
VPS41-211ENST00000466017 PP6455Q8WZ26 134 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 AP3S1Q92572 193 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 AKAP1Q92667 903 aaKnown RBP eCLIP4.72□□□□□ -1.65
VPS41-211ENST00000466017 RNASE6Q93091 150 aaKnown RBP4.72□□□□□ -1.65
VPS41-211ENST00000466017 TMEM203Q969S6 136 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 MUCL1Q96DR8 90 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 LRRC46Q96FV0 321 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 TECTBQ96PL2 329 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 TTTY10Q9BZA0 68 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 SLITRK2Q9H156 845 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 PPIL3Q9H2H8 161 aaKnown RBP4.72□□□□□ -1.65
VPS41-211ENST00000466017 NEK6Q9HC98 313 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 TCF7L1Q9HCS4 588 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 NOX4Q9NPH5 578 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 COQ3Q9NZJ6 369 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 ABRACLQ9P1F3 81 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 EIF3KQ9UBQ5 218 aaKnown RBP4.72□□□□□ -1.65
VPS41-211ENST00000466017 ERRFI1Q9UJM3 462 aaPredicted RBP4.72□□□□□ -1.65
VPS41-211ENST00000466017 DHDHQ9UQ10 334 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 NCOR2Q9Y618 2525 aa4.72□□□□□ -1.65
VPS41-211ENST00000466017 ZFHX4Q86UP3 3567 aa4.71□□□□□ -1.65
VPS41-211ENST00000466017 FREM2Q5SZK8 3169 aa4.71□□□□□ -1.65
VPS41-211ENST00000466017 LOC400499M0QZD8 3231 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 DMXL2Q8TDJ6 3036 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 A0A0G2JK05 382 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 PNMA8CA0A1B0GUJ8 204 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 LOC107986453A0A1B0GWG9 222 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 CASKO14936 926 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 LRRTM2O43300 516 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 RAD51DO75771 328 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 LYZL6O75951 148 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 CLPXO76031 633 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 LCATP04180 440 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 ANXA2P07355 339 aaKnown RBP4.71□□□□□ -1.66
VPS41-211ENST00000466017 PRF1P14222 555 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 RAB3BP20337 219 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 IL32P24001 234 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 PTAFRP25105 342 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 PTBP1P26599 531 aaKnown RBP eCLIP4.71□□□□□ -1.66
VPS41-211ENST00000466017 ETV6P41212 452 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 RAD52P43351 418 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 CAPZA1P52907 286 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 UCP2P55851 309 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 LSM3P62310 102 aaKnown RBP4.71□□□□□ -1.66
VPS41-211ENST00000466017 FAM3AP98173 230 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 GALK2Q01415 458 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 FAM27E3Q08E93 113 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 RIPPLY1Q0D2K3 151 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 MALLQ13021 153 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 OR8B8Q15620 311 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 MOGQ16653 247 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 MST1LQ2TV78 715 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 ZNF404Q494X3 552 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 HIKESHIQ53FT3 197 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 C1orf100Q5SVJ3 147 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 C9orf135Q5VTT2 229 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 ASPHD2Q6ICH7 369 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 FAM166AQ6J272 317 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 MYO7BQ6PIF6 2116 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 FBXW12Q6X9E4 464 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 FAM57BQ71RH2 274 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 LUZP2Q86TE4 346 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 LRRTM1Q86UE6 522 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 RDH10Q8IZV5 341 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 DNAAF1Q8NEP3 725 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 CSNK2A3Q8NEV1 391 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 SLC30A7Q8NEW0 376 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 SSC4DQ8WTU2 575 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 HTRA1Q92743 480 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 PIGTQ969N2 578 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 RAB24Q969Q5 203 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 TMEM106AQ96A25 262 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 LYZL4Q96KX0 146 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 WDFY2Q96P53 400 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 KCNS3Q9BQ31 491 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 UQCC2Q9BRT2 126 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 BARHL1Q9BZE3 327 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 BCL2L14Q9BZR8 327 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 RNF167Q9H6Y7 350 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 NOX3Q9HBY0 568 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 NGBQ9NPG2 151 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 TMEM138Q9NPI0 162 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 GPR84Q9NQS5 396 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 RABL2AQ9UBK7 228 aaPredicted RBP4.71□□□□□ -1.66
VPS41-211ENST00000466017 GHRLQ9UBU3 117 aa4.71□□□□□ -1.66
VPS41-211ENST00000466017 PLEKHB1Q9UF11 243 aaPredicted RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms