RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 CD300AQ9UGN4 299 aa7.96□□□□□ -1.14
USP39-212ENST00000465514 VPREB3Q9UKI3 123 aa7.96□□□□□ -1.14
USP39-212ENST00000465514 LYVE1Q9Y5Y7 322 aa7.96□□□□□ -1.14
USP39-212ENST00000465514 A0A1W2PRD5 423 aa7.95□□□□□ -1.14
USP39-212ENST00000465514 A0A1W2PRF3 423 aa7.95□□□□□ -1.14
USP39-212ENST00000465514 A0A1W2PRM7 423 aa7.95□□□□□ -1.14
USP39-212ENST00000465514 DHRS12A0PJE2 317 aa7.95□□□□□ -1.14
USP39-212ENST00000465514 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.95□□□□□ -1.14
USP39-212ENST00000465514 TNFRSF11BO00300 401 aa7.95□□□□□ -1.14
USP39-212ENST00000465514 ACOT8O14734 319 aa7.95□□□□□ -1.14
USP39-212ENST00000465514 NDUFB3O43676 98 aa7.95□□□□□ -1.14
USP39-212ENST00000465514 FBP1P09467 338 aa7.95□□□□□ -1.14
USP39-212ENST00000465514 CLUP10909 449 aa7.95□□□□□ -1.14
USP39-212ENST00000465514 SPI1P17947 270 aa7.95□□□□□ -1.14
USP39-212ENST00000465514 TGFBR2P37173 567 aa7.95□□□□□ -1.14
USP39-212ENST00000465514 NAA10P41227 235 aaPredicted RBP7.95□□□□□ -1.14
USP39-212ENST00000465514 SLC15A1P46059 708 aa7.95□□□□□ -1.14
USP39-212ENST00000465514 EFNB2P52799 333 aa7.95□□□□□ -1.14
USP39-212ENST00000465514 SLC25A1P53007 311 aa7.95□□□□□ -1.14
USP39-212ENST00000465514 DLX1P56177 255 aa7.95□□□□□ -1.14
USP39-212ENST00000465514 KRTAP10-11P60412 298 aa7.95□□□□□ -1.14
USP39-212ENST00000465514 GRB2P62993 217 aaKnown RBP7.95□□□□□ -1.14
USP39-212ENST00000465514 PRB3Q04118 309 aaPredicted RBP7.95□□□□□ -1.14
USP39-212ENST00000465514 IKZF1Q13422 519 aa7.95□□□□□ -1.14
USP39-212ENST00000465514 CRMP1Q14194 572 aa7.95□□□□□ -1.14
USP39-212ENST00000465514 EIF2B1Q14232 305 aaKnown RBP7.95□□□□□ -1.14
USP39-212ENST00000465514 TIGD6Q17RP2 521 aa7.95□□□□□ -1.14
USP39-212ENST00000465514 HSP90B2PQ58FF3 399 aa7.95□□□□□ -1.14
USP39-212ENST00000465514 SAMD4BQ5PRF9 694 aaKnown RBP7.95□□□□□ -1.14
USP39-212ENST00000465514 ZBTB37Q5TC79 503 aa7.95□□□□□ -1.14
USP39-212ENST00000465514 ZNF770Q6IQ21 691 aaPredicted RBP7.95□□□□□ -1.14
USP39-212ENST00000465514 C1orf122Q6ZSJ8 110 aa7.95□□□□□ -1.14
USP39-212ENST00000465514 RASSF6Q6ZTQ3 369 aa7.95□□□□□ -1.14
USP39-212ENST00000465514 FAM57BQ71RH2 274 aa7.95□□□□□ -1.14
USP39-212ENST00000465514 SLC36A1Q7Z2H8 476 aa7.95□□□□□ -1.14
USP39-212ENST00000465514 CMTM4Q8IZR5 234 aa7.95□□□□□ -1.14
USP39-212ENST00000465514 LINC00471Q8N535 108 aa7.95□□□□□ -1.14
USP39-212ENST00000465514 FAM216BQ8N7L0 139 aa7.95□□□□□ -1.14
USP39-212ENST00000465514 OR5T2Q8NGG2 359 aa7.95□□□□□ -1.14
USP39-212ENST00000465514 OR6K6Q8NGW6 343 aa7.95□□□□□ -1.14
USP39-212ENST00000465514 OR4Q3Q8NH05 313 aa7.95□□□□□ -1.14
USP39-212ENST00000465514 R3HDM4Q96D70 268 aa7.95□□□□□ -1.14
USP39-212ENST00000465514 REEP6Q96HR9 211 aa7.95□□□□□ -1.14
USP39-212ENST00000465514 SIRT7Q9NRC8 400 aa7.95□□□□□ -1.14
USP39-212ENST00000465514 TBC1D23Q9NUY8 699 aa7.95□□□□□ -1.14
USP39-212ENST00000465514 DNAJB11Q9UBS4 358 aa7.95□□□□□ -1.14
USP39-212ENST00000465514 RHBDD3Q9Y3P4 386 aa7.95□□□□□ -1.14
USP39-212ENST00000465514 hCG_38984A0A1B0GV85 526 aa7.94□□□□□ -1.14
USP39-212ENST00000465514 BTBD17A6NE02 478 aa7.94□□□□□ -1.14
USP39-212ENST00000465514 ANKRD61A6NGH8 418 aa7.94□□□□□ -1.14
USP39-212ENST00000465514 RNASEK-C17orf49H0YIS7 233 aa7.94□□□□□ -1.14
USP39-212ENST00000465514 CDIPTO14735 213 aa7.94□□□□□ -1.14
USP39-212ENST00000465514 NPFFO15130 113 aa7.94□□□□□ -1.14
USP39-212ENST00000465514 TIPRLO75663 272 aa7.94□□□□□ -1.14
USP39-212ENST00000465514 CCNB2O95067 398 aa7.94□□□□□ -1.14
USP39-212ENST00000465514 AMY2BP19961 511 aa7.94□□□□□ -1.14
USP39-212ENST00000465514 CD33P20138 364 aa7.94□□□□□ -1.14
USP39-212ENST00000465514 EEF1B2P24534 225 aaKnown RBP7.94□□□□□ -1.14
USP39-212ENST00000465514 HSD11B1P28845 292 aa7.94□□□□□ -1.14
USP39-212ENST00000465514 GNALP38405 381 aa7.94□□□□□ -1.14
USP39-212ENST00000465514 TGM4P49221 684 aa7.94□□□□□ -1.14
USP39-212ENST00000465514 GSK3AP49840 483 aa7.94□□□□□ -1.14
USP39-212ENST00000465514 ZNF121P58317 390 aaPredicted RBP7.94□□□□□ -1.14
USP39-212ENST00000465514 GMFBP60983 142 aa7.94□□□□□ -1.14
USP39-212ENST00000465514 PPP1R8Q12972 351 aaKnown RBP7.94□□□□□ -1.14
USP39-212ENST00000465514 GFOD2Q3B7J2 385 aa7.94□□□□□ -1.14
USP39-212ENST00000465514 KLHL12Q53G59 568 aa7.94□□□□□ -1.14
USP39-212ENST00000465514 LRRC10Q5BKY1 277 aa7.94□□□□□ -1.14
USP39-212ENST00000465514 DMRTC1Q5HYR2 192 aa7.94□□□□□ -1.14
USP39-212ENST00000465514 ATPAF1Q5TC12 328 aaPredicted RBP7.94□□□□□ -1.14
USP39-212ENST00000465514 METAP1DQ6UB28 335 aaPredicted RBP7.94□□□□□ -1.14
USP39-212ENST00000465514 PRSS45Q7RTY3 260 aa7.94□□□□□ -1.14
USP39-212ENST00000465514 PGAM4Q8N0Y7 254 aa7.94□□□□□ -1.14
USP39-212ENST00000465514 Q8N7P7 452 aa7.94□□□□□ -1.14
USP39-212ENST00000465514 AQP11Q8NBQ7 271 aa7.94□□□□□ -1.14
USP39-212ENST00000465514 OR4F17Q8NGA8 305 aa7.94□□□□□ -1.14
USP39-212ENST00000465514 NPRL2Q8WTW4 380 aa7.94□□□□□ -1.14
USP39-212ENST00000465514 C12orf43Q96C57 262 aaKnown RBP7.94□□□□□ -1.14
USP39-212ENST00000465514 DMRTB1Q96MA1 342 aa7.94□□□□□ -1.14
USP39-212ENST00000465514 OR4F4Q96R69 305 aa7.94□□□□□ -1.14
USP39-212ENST00000465514 DCTN5Q9BTE1 182 aa7.94□□□□□ -1.14
USP39-212ENST00000465514 ABHD6Q9BV23 337 aa7.94□□□□□ -1.14
USP39-212ENST00000465514 FAM107BQ9H098 131 aa7.94□□□□□ -1.14
USP39-212ENST00000465514 TLNRD1Q9H1K6 362 aa7.94□□□□□ -1.14
USP39-212ENST00000465514 PPA2Q9H2U2 334 aa7.94□□□□□ -1.14
USP39-212ENST00000465514 SP140LQ9H930 580 aa7.94□□□□□ -1.14
USP39-212ENST00000465514 BRD7Q9NPI1 651 aa7.94□□□□□ -1.14
USP39-212ENST00000465514 ARMC1Q9NVT9 282 aa7.94□□□□□ -1.14
USP39-212ENST00000465514 HAO2Q9NYQ3 351 aa7.94□□□□□ -1.14
USP39-212ENST00000465514 DNAJC27Q9NZQ0 273 aa7.94□□□□□ -1.14
USP39-212ENST00000465514 ZNRD1Q9P1U0 126 aa7.94□□□□□ -1.14
USP39-212ENST00000465514 ZNF319Q9P2F9 582 aa7.94□□□□□ -1.14
USP39-212ENST00000465514 PRPF19Q9UMS4 504 aaKnown RBP7.94□□□□□ -1.14
USP39-212ENST00000465514 BAIAP2Q9UQB8 552 aa7.94□□□□□ -1.14
USP39-212ENST00000465514 CAB39Q9Y376 341 aaPredicted RBP7.94□□□□□ -1.14
USP39-212ENST00000465514 SOX14O95416 240 aa7.93□□□□□ -1.14
USP39-212ENST00000465514 APOC1P02654 83 aa7.93□□□□□ -1.14
USP39-212ENST00000465514 TFF1P04155 84 aa7.93□□□□□ -1.14
USP39-212ENST00000465514 SELLP14151 372 aa7.93□□□□□ -1.14
USP39-212ENST00000465514 CFL1P23528 166 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms