RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 HSP90AA4PQ58FG1 418 aa2.3□□□□□ -2.04
CLK1-208ENST00000464454 Q6ZSR6 202 aa2.3□□□□□ -2.04
CLK1-208ENST00000464454 DAW1Q8N136 415 aa2.3□□□□□ -2.04
CLK1-208ENST00000464454 DRAM1Q8N682 238 aa2.3□□□□□ -2.04
CLK1-208ENST00000464454 WDR31Q8NA23 367 aa2.3□□□□□ -2.04
CLK1-208ENST00000464454 OR1S1Q8NH92 325 aa2.3□□□□□ -2.04
CLK1-208ENST00000464454 ENKURQ8TC29 256 aa2.3□□□□□ -2.04
CLK1-208ENST00000464454 RMI2Q96E14 147 aa2.3□□□□□ -2.04
CLK1-208ENST00000464454 UBE2E2Q96LR5 201 aa2.3□□□□□ -2.04
CLK1-208ENST00000464454 OSBPL11Q9BXB4 747 aa2.3□□□□□ -2.04
CLK1-208ENST00000464454 RBFOX1Q9NWB1 397 aaKnown RBP2.3□□□□□ -2.04
CLK1-208ENST00000464454 ZMAT5Q9UDW3 170 aaKnown RBP2.3□□□□□ -2.04
CLK1-208ENST00000464454 FARSAQ9Y285 508 aaKnown RBP2.3□□□□□ -2.04
CLK1-208ENST00000464454 OR51B2Q9Y5P1 312 aa2.3□□□□□ -2.04
CLK1-208ENST00000464454 SBNO1A3KN83 1393 aa2.3□□□□□ -2.04
CLK1-208ENST00000464454 KIF27Q86VH2 1401 aa2.29□□□□□ -2.04
CLK1-208ENST00000464454 M0R1X1 148 aa2.29□□□□□ -2.04
CLK1-208ENST00000464454 SCO1O75880 301 aa2.29□□□□□ -2.04
CLK1-208ENST00000464454 SNAI1O95863 264 aaPredicted RBP2.29□□□□□ -2.04
CLK1-208ENST00000464454 HOXB8P17481 243 aaPredicted RBP2.29□□□□□ -2.04
CLK1-208ENST00000464454 ERFP50548 548 aa2.29□□□□□ -2.04
CLK1-208ENST00000464454 KRTAP10-10P60014 251 aa2.29□□□□□ -2.04
CLK1-208ENST00000464454 PAFAH1B2P68402 229 aa2.29□□□□□ -2.04
CLK1-208ENST00000464454 DMC1Q14565 340 aa2.29□□□□□ -2.04
CLK1-208ENST00000464454 NKAIN1Q4KMZ8 207 aa2.29□□□□□ -2.04
CLK1-208ENST00000464454 C6orf99Q4VX62 202 aa2.29□□□□□ -2.04
CLK1-208ENST00000464454 TMEM236Q5W0B7 351 aa2.29□□□□□ -2.04
CLK1-208ENST00000464454 STEAP4Q687X5 459 aa2.29□□□□□ -2.04
CLK1-208ENST00000464454 LINC00469Q8N7U9 141 aa2.29□□□□□ -2.04
CLK1-208ENST00000464454 TMEM105Q8N8V8 129 aa2.29□□□□□ -2.04
CLK1-208ENST00000464454 OR6K6Q8NGW6 343 aa2.29□□□□□ -2.04
CLK1-208ENST00000464454 FAM19A4Q96LR4 140 aa2.29□□□□□ -2.04
CLK1-208ENST00000464454 NUDT9Q9BW91 350 aa2.29□□□□□ -2.04
CLK1-208ENST00000464454 FBXO44Q9H4M3 255 aa2.29□□□□□ -2.04
CLK1-208ENST00000464454 KIR3DX1Q9H7L2 352 aa2.29□□□□□ -2.04
CLK1-208ENST00000464454 SIGLEC9Q9Y336 463 aa2.29□□□□□ -2.04
CLK1-208ENST00000464454 CHTOPQ9Y3Y2 248 aaKnown RBP2.29□□□□□ -2.04
CLK1-208ENST00000464454 LRRC42Q9Y546 428 aa2.29□□□□□ -2.04
CLK1-208ENST00000464454 C2orf16Q68DN1 1984 aa2.29□□□□□ -2.04
CLK1-208ENST00000464454 YEATS2Q9ULM3 1422 aa2.28□□□□□ -2.04
CLK1-208ENST00000464454 IGHV1-3A0A0C4DH29 117 aa2.28□□□□□ -2.04
CLK1-208ENST00000464454 CENPBD1B2RD01 187 aa2.28□□□□□ -2.04
CLK1-208ENST00000464454 TTC4O95801 387 aa2.28□□□□□ -2.04
CLK1-208ENST00000464454 OTCP00480 354 aa2.28□□□□□ -2.04
CLK1-208ENST00000464454 RPN2P04844 631 aa2.28□□□□□ -2.04
CLK1-208ENST00000464454 CRYGCP07315 174 aa2.28□□□□□ -2.04
CLK1-208ENST00000464454 CXCR1P25024 350 aa2.28□□□□□ -2.04
CLK1-208ENST00000464454 IVDP26440 423 aa2.28□□□□□ -2.04
CLK1-208ENST00000464454 PSMC5P62195 406 aa2.28□□□□□ -2.04
CLK1-208ENST00000464454 C2orf54Q08AI8 447 aa2.28□□□□□ -2.04
CLK1-208ENST00000464454 INCA1Q0VD86 236 aa2.28□□□□□ -2.04
CLK1-208ENST00000464454 LRRC52Q8N7C0 313 aa2.28□□□□□ -2.04
CLK1-208ENST00000464454 SPANXA2-OT1Q8N9U9 137 aa2.28□□□□□ -2.04
CLK1-208ENST00000464454 OR4M2Q8NGB6 313 aa2.28□□□□□ -2.04
CLK1-208ENST00000464454 OR51L1Q8NGJ5 315 aa2.28□□□□□ -2.04
CLK1-208ENST00000464454 RXFP2Q8WXD0 754 aa2.28□□□□□ -2.04
CLK1-208ENST00000464454 BAALCQ8WXS3 180 aa2.28□□□□□ -2.04
CLK1-208ENST00000464454 OR8D1Q8WZ84 308 aa2.28□□□□□ -2.04
CLK1-208ENST00000464454 TOP1MTQ969P6 601 aa2.28□□□□□ -2.04
CLK1-208ENST00000464454 TMEM159Q96B96 161 aa2.28□□□□□ -2.04
CLK1-208ENST00000464454 TMEM175Q9BSA9 504 aa2.28□□□□□ -2.04
CLK1-208ENST00000464454 RTBDNQ9BSG5 229 aaPredicted RBP2.28□□□□□ -2.04
CLK1-208ENST00000464454 ULBP2Q9BZM5 246 aa2.28□□□□□ -2.04
CLK1-208ENST00000464454 ING2Q9H160 280 aa2.28□□□□□ -2.04
CLK1-208ENST00000464454 LZTFL1Q9NQ48 299 aa2.28□□□□□ -2.04
CLK1-208ENST00000464454 HEBP1Q9NRV9 189 aa2.28□□□□□ -2.04
CLK1-208ENST00000464454 NDRG2Q9UN36 371 aaKnown RBP2.28□□□□□ -2.04
CLK1-208ENST00000464454 SIGLEC7Q9Y286 467 aa2.28□□□□□ -2.04
CLK1-208ENST00000464454 KPTNQ9Y664 436 aa2.28□□□□□ -2.04
CLK1-208ENST00000464454 SIGLEC1Q9BZZ2 1709 aa2.28□□□□□ -2.05
CLK1-208ENST00000464454 ZNF608Q9ULD9 1512 aaPredicted RBP2.27□□□□□ -2.05
CLK1-208ENST00000464454 AQRO60306 1485 aaKnown RBP eCLIP2.27□□□□□ -2.056e-7■■□□□ 11.9
CLK1-208ENST00000464454 A0A0J9YYE9 177 aa2.27□□□□□ -2.05
CLK1-208ENST00000464454 A8MUU9 505 aa2.27□□□□□ -2.05
CLK1-208ENST00000464454 DFFAO00273 331 aa2.27□□□□□ -2.05
CLK1-208ENST00000464454 POLR1CO15160 346 aaPredicted RBP2.27□□□□□ -2.05
CLK1-208ENST00000464454 CDRT1O95170 752 aa2.27□□□□□ -2.05
CLK1-208ENST00000464454 ETHE1O95571 254 aa2.27□□□□□ -2.05
CLK1-208ENST00000464454 PTTG1O95997 202 aa2.27□□□□□ -2.05
CLK1-208ENST00000464454 GCGP01275 180 aa2.27□□□□□ -2.05
CLK1-208ENST00000464454 IGLV2-8P01709 118 aa2.27□□□□□ -2.05
CLK1-208ENST00000464454 TRBC1P01850 177 aa2.27□□□□□ -2.05
CLK1-208ENST00000464454 SLC35G6P0C7Q6 338 aa2.27□□□□□ -2.05
CLK1-208ENST00000464454 STAG3L2P0CL84 134 aa2.27□□□□□ -2.05
CLK1-208ENST00000464454 ZNF14P17017 642 aaPredicted RBP2.27□□□□□ -2.05
CLK1-208ENST00000464454 PRKACBP22694 351 aa2.27□□□□□ -2.05
CLK1-208ENST00000464454 MTPNP58546 118 aa2.27□□□□□ -2.05
CLK1-208ENST00000464454 SLC35A1P78382 337 aa2.27□□□□□ -2.05
CLK1-208ENST00000464454 FUT5Q11128 374 aa2.27□□□□□ -2.05
CLK1-208ENST00000464454 ST3GAL4Q11206 333 aa2.27□□□□□ -2.05
CLK1-208ENST00000464454 STK38Q15208 465 aa2.27□□□□□ -2.05
CLK1-208ENST00000464454 DNLZQ5SXM8 178 aa2.27□□□□□ -2.05
CLK1-208ENST00000464454 THOC7Q6I9Y2 204 aaKnown RBP2.27□□□□□ -2.05
CLK1-208ENST00000464454 ARHGAP18Q8N392 663 aa2.27□□□□□ -2.05
CLK1-208ENST00000464454 SLC35G3Q8N808 338 aa2.27□□□□□ -2.05
CLK1-208ENST00000464454 ST20-AS1Q8NBB2 130 aa2.27□□□□□ -2.05
CLK1-208ENST00000464454 APCDD1LQ8NCL9 501 aa2.27□□□□□ -2.05
CLK1-208ENST00000464454 OR52K1Q8NGK4 314 aa2.27□□□□□ -2.05
CLK1-208ENST00000464454 TFGQ92734 400 aaPredicted RBP2.27□□□□□ -2.05
CLK1-208ENST00000464454 MRPL48Q96GC5 212 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms