RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 MOGAT3Q86VF5 341 aa16.74■□□□□ 0.27
COL9A3-204ENST00000463487 OR14K1Q8NGZ2 314 aa16.74■□□□□ 0.27
COL9A3-204ENST00000463487 OR5AK2Q8NH90 309 aa16.74■□□□□ 0.27
COL9A3-204ENST00000463487 TECTBQ96PL2 329 aa16.74■□□□□ 0.27
COL9A3-204ENST00000463487 MND1Q9BWT6 205 aa16.74■□□□□ 0.27
COL9A3-204ENST00000463487 TREM2Q9NZC2 230 aa16.74■□□□□ 0.27
COL9A3-204ENST00000463487 PCDHGB5Q9Y5G0 923 aa16.74■□□□□ 0.27
COL9A3-204ENST00000463487 AKAP9Q99996 3911 aa16.73■□□□□ 0.27
COL9A3-204ENST00000463487 OR5B21A6NL26 309 aa16.73■□□□□ 0.27
COL9A3-204ENST00000463487 SMAD7O15105 426 aaKnown RBP16.73■□□□□ 0.27
COL9A3-204ENST00000463487 DENRO43583 198 aaKnown RBP16.73■□□□□ 0.27
COL9A3-204ENST00000463487 GATBO75879 557 aaKnown RBP16.73■□□□□ 0.27
COL9A3-204ENST00000463487 PTBP3O95758 552 aaKnown RBP16.73■□□□□ 0.27
COL9A3-204ENST00000463487 NRASP01111 189 aa16.73■□□□□ 0.27
COL9A3-204ENST00000463487 GRPP07492 148 aa16.73■□□□□ 0.27
COL9A3-204ENST00000463487 INHBBP09529 407 aa16.73■□□□□ 0.27
COL9A3-204ENST00000463487 ZNF20P17024 532 aa16.73■□□□□ 0.27
COL9A3-204ENST00000463487 WNT4P56705 351 aa16.73■□□□□ 0.27
COL9A3-204ENST00000463487 NANOS3P60323 173 aaKnown RBP16.73■□□□□ 0.27
COL9A3-204ENST00000463487 SLC35A2P78381 396 aa16.73■□□□□ 0.27
COL9A3-204ENST00000463487 RNLSQ5VYX0 342 aa16.73■□□□□ 0.27
COL9A3-204ENST00000463487 PLCXD3Q63HM9 321 aa16.73■□□□□ 0.27
COL9A3-204ENST00000463487 GATAD2BQ8WXI9 593 aa16.73■□□□□ 0.27
COL9A3-204ENST00000463487 PP6455Q8WZ26 134 aa16.73■□□□□ 0.27
COL9A3-204ENST00000463487 OR5P3Q8WZ94 311 aa16.73■□□□□ 0.27
COL9A3-204ENST00000463487 DVL3Q92997 716 aaPredicted RBP16.73■□□□□ 0.27
COL9A3-204ENST00000463487 ITPKCQ96DU7 683 aa16.73■□□□□ 0.27
COL9A3-204ENST00000463487 SOX7Q9BT81 388 aa16.73■□□□□ 0.27
COL9A3-204ENST00000463487 CLEC2DQ9UHP7 191 aa16.73■□□□□ 0.27
COL9A3-204ENST00000463487 CACNG2Q9Y698 323 aa16.73■□□□□ 0.27
COL9A3-204ENST00000463487 ITPR3Q14573 2671 aa16.72■□□□□ 0.27
COL9A3-204ENST00000463487 TANC2Q9HCD6 1990 aa16.72■□□□□ 0.27
COL9A3-204ENST00000463487 OR4C45A6NMZ5 311 aa16.72■□□□□ 0.27
COL9A3-204ENST00000463487 RGS10O43665 173 aa16.72■□□□□ 0.27
COL9A3-204ENST00000463487 CRHBPP24387 322 aa16.72■□□□□ 0.27
COL9A3-204ENST00000463487 EEF1B2P24534 225 aaKnown RBP16.72■□□□□ 0.27
COL9A3-204ENST00000463487 C21orf33P30042 268 aaPredicted RBP16.72■□□□□ 0.27
COL9A3-204ENST00000463487 MVKQ03426 396 aa16.72■□□□□ 0.27
COL9A3-204ENST00000463487 CEACAM21Q3KPI0 293 aa16.72■□□□□ 0.27
COL9A3-204ENST00000463487 MOB3CQ70IA8 216 aa16.72■□□□□ 0.27
COL9A3-204ENST00000463487 OR5A2Q8NGI9 324 aa16.72■□□□□ 0.27
COL9A3-204ENST00000463487 OR13C3Q8NGS6 347 aa16.72■□□□□ 0.27
COL9A3-204ENST00000463487 Q8TCH9 128 aa16.72■□□□□ 0.27
COL9A3-204ENST00000463487 RNF166Q96A37 237 aaPredicted RBP16.72■□□□□ 0.27
COL9A3-204ENST00000463487 RNF170Q96K19 258 aa16.72■□□□□ 0.27
COL9A3-204ENST00000463487 CDCA4Q9BXL8 241 aa16.72■□□□□ 0.27
COL9A3-204ENST00000463487 UFSP2Q9NUQ7 469 aa16.72■□□□□ 0.27
COL9A3-204ENST00000463487 NPTNQ9Y639 398 aa16.72■□□□□ 0.27
COL9A3-204ENST00000463487 IGHV3-64DA0A0J9YX35 117 aa16.71■□□□□ 0.27
COL9A3-204ENST00000463487 LOC100289279A0A1B0GTE1 492 aa16.71■□□□□ 0.27
COL9A3-204ENST00000463487 ISPDA4D126 451 aa16.71■□□□□ 0.27
COL9A3-204ENST00000463487 ANKRD61A6NGH8 418 aa16.71■□□□□ 0.27
COL9A3-204ENST00000463487 GNG3P63215 75 aa16.71■□□□□ 0.27
COL9A3-204ENST00000463487 CDK5R1Q15078 307 aa16.71■□□□□ 0.27
COL9A3-204ENST00000463487 SPRNQ5BIV9 151 aa16.71■□□□□ 0.27
COL9A3-204ENST00000463487 PRAMEF6Q5VXH4 476 aa16.71■□□□□ 0.27
COL9A3-204ENST00000463487 BIVMQ86UB2 503 aa16.71■□□□□ 0.27
COL9A3-204ENST00000463487 ZNF420Q8TAQ5 688 aaPredicted RBP16.71■□□□□ 0.27
COL9A3-204ENST00000463487 CCDC90BQ9GZT6 254 aa16.71■□□□□ 0.27
COL9A3-204ENST00000463487 NEK6Q9HC98 313 aa16.71■□□□□ 0.27
COL9A3-204ENST00000463487 SLC7A11Q9UPY5 501 aa16.71■□□□□ 0.27
COL9A3-204ENST00000463487 WIPI2Q9Y4P8 454 aa16.71■□□□□ 0.27
COL9A3-204ENST00000463487 DYSFO75923 2080 aa16.7■□□□□ 0.26
COL9A3-204ENST00000463487 hCG_1807616A0A1W2PRN6 198 aa16.7■□□□□ 0.26
COL9A3-204ENST00000463487 E9PI62 339 aa16.7■□□□□ 0.26
COL9A3-204ENST00000463487 TMEM178BH3BS89 294 aa16.7■□□□□ 0.26
COL9A3-204ENST00000463487 H3BSH0 61 aa16.7■□□□□ 0.26
COL9A3-204ENST00000463487 ZFPL1O95159 310 aa16.7■□□□□ 0.26
COL9A3-204ENST00000463487 OCM2P0CE71 109 aa16.7■□□□□ 0.26
COL9A3-204ENST00000463487 OCMP0CE72 109 aaPredicted RBP16.7■□□□□ 0.26
COL9A3-204ENST00000463487 CNN3Q15417 329 aaKnown RBP16.7■□□□□ 0.26
COL9A3-204ENST00000463487 CEP78Q5JTW2 689 aa16.7■□□□□ 0.26
COL9A3-204ENST00000463487 TMEM42Q69YG0 159 aa16.7■□□□□ 0.26
COL9A3-204ENST00000463487 RDH10Q8IZV5 341 aa16.7■□□□□ 0.26
COL9A3-204ENST00000463487 MUC20Q8N307 709 aaPredicted RBP16.7■□□□□ 0.26
COL9A3-204ENST00000463487 CIARTQ8N365 385 aaPredicted RBP16.7■□□□□ 0.26
COL9A3-204ENST00000463487 NANOGP1Q8N7R0 232 aa16.7■□□□□ 0.26
COL9A3-204ENST00000463487 OR1M1Q8NGA1 313 aa16.7■□□□□ 0.26
COL9A3-204ENST00000463487 TSEN15Q8WW01 171 aaKnown RBP16.7■□□□□ 0.26
COL9A3-204ENST00000463487 SMIM19Q96E16 107 aa16.7■□□□□ 0.26
COL9A3-204ENST00000463487 GAL3ST1Q99999 423 aa16.7■□□□□ 0.26
COL9A3-204ENST00000463487 CHST5Q9GZS9 411 aa16.7■□□□□ 0.26
COL9A3-204ENST00000463487 DUSP21Q9H596 190 aa16.7■□□□□ 0.26
COL9A3-204ENST00000463487 C1orf123Q9NWV4 160 aa16.7■□□□□ 0.26
COL9A3-204ENST00000463487 RNF7Q9UBF6 113 aa16.7■□□□□ 0.26
COL9A3-204ENST00000463487 DHDHQ9UQ10 334 aa16.7■□□□□ 0.26
COL9A3-204ENST00000463487 LRP5LA4QPB2 252 aa16.69■□□□□ 0.26
COL9A3-204ENST00000463487 CD2P06729 351 aa16.69■□□□□ 0.26
COL9A3-204ENST00000463487 GPM6AP51674 278 aa16.69■□□□□ 0.26
COL9A3-204ENST00000463487 GTF2A1P52655 376 aaPredicted RBP16.69■□□□□ 0.26
COL9A3-204ENST00000463487 BTG1P62324 171 aa16.69■□□□□ 0.26
COL9A3-204ENST00000463487 BDH1Q02338 343 aa16.69■□□□□ 0.26
COL9A3-204ENST00000463487 ZNF154Q13106 437 aa16.69■□□□□ 0.26
COL9A3-204ENST00000463487 MPPED2Q15777 294 aa16.69■□□□□ 0.26
COL9A3-204ENST00000463487 KCNJ8Q15842 424 aa16.69■□□□□ 0.26
COL9A3-204ENST00000463487 AVPI1Q5T686 147 aa16.69■□□□□ 0.26
COL9A3-204ENST00000463487 PRSS48Q7RTY5 328 aa16.69■□□□□ 0.26
COL9A3-204ENST00000463487 SPICQ8N5J4 248 aa16.69■□□□□ 0.26
COL9A3-204ENST00000463487 GPR148Q8TDV2 347 aa16.69■□□□□ 0.26
COL9A3-204ENST00000463487 HPSE2Q8WWQ2 592 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms