RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 ZNHIT1O43257 154 aa8.67□□□□□ -1.02
PTPRD-207ENST00000463477 NOS1APO75052 506 aaPredicted RBP8.67□□□□□ -1.02
PTPRD-207ENST00000463477 RAB3DO95716 219 aa8.67□□□□□ -1.02
PTPRD-207ENST00000463477 CYB5AP00167 134 aa8.67□□□□□ -1.02
PTPRD-207ENST00000463477 IGLV3-1P01715 115 aa8.67□□□□□ -1.02
PTPRD-207ENST00000463477 ZNF735P0CB33 412 aa8.67□□□□□ -1.02
PTPRD-207ENST00000463477 RNF224P0DH78 156 aa8.67□□□□□ -1.02
PTPRD-207ENST00000463477 GDF1P27539 372 aa8.67□□□□□ -1.02
PTPRD-207ENST00000463477 ZNF81P51508 661 aa8.67□□□□□ -1.02
PTPRD-207ENST00000463477 SUCLG1P53597 346 aaKnown RBP8.67□□□□□ -1.02
PTPRD-207ENST00000463477 TSPAN5P62079 268 aa8.67□□□□□ -1.02
PTPRD-207ENST00000463477 TMEM176BQ3YBM2 270 aaPredicted RBP8.67□□□□□ -1.02
PTPRD-207ENST00000463477 ZNF260Q3ZCT1 412 aa8.67□□□□□ -1.02
PTPRD-207ENST00000463477 CLLU1Q5K131 121 aa8.67□□□□□ -1.02
PTPRD-207ENST00000463477 Q6ZSR3 168 aa8.67□□□□□ -1.02
PTPRD-207ENST00000463477 ZNF627Q7L945 461 aa8.67□□□□□ -1.02
PTPRD-207ENST00000463477 FTMTQ8N4E7 242 aa8.67□□□□□ -1.02
PTPRD-207ENST00000463477 OR2AK2Q8NG84 335 aa8.67□□□□□ -1.02
PTPRD-207ENST00000463477 OR4D10Q8NGI6 311 aa8.67□□□□□ -1.02
PTPRD-207ENST00000463477 ANGPTL6Q8NI99 470 aa8.67□□□□□ -1.02
PTPRD-207ENST00000463477 TMEM54Q969K7 222 aa8.67□□□□□ -1.02
PTPRD-207ENST00000463477 INTS12Q96CB8 462 aaKnown RBP8.67□□□□□ -1.02
PTPRD-207ENST00000463477 ADAT3Q96EY9 351 aaPredicted RBP8.67□□□□□ -1.02
PTPRD-207ENST00000463477 NAA11Q9BSU3 229 aaPredicted RBP8.67□□□□□ -1.02
PTPRD-207ENST00000463477 POLR1DQ9Y2S0 133 aa8.67□□□□□ -1.02
PTPRD-207ENST00000463477 LIPGQ9Y5X9 500 aa8.67□□□□□ -1.02
PTPRD-207ENST00000463477 ZNF736B4DX44 427 aaPredicted RBP8.66□□□□□ -1.02
PTPRD-207ENST00000463477 ZNF814B7Z6K7 855 aa8.66□□□□□ -1.02
PTPRD-207ENST00000463477 EIF1AYO14602 144 aaKnown RBP8.66□□□□□ -1.02
PTPRD-207ENST00000463477 LMX1BO60663 402 aa8.66□□□□□ -1.02
PTPRD-207ENST00000463477 TRAPPC6AO75865 159 aa8.66□□□□□ -1.02
PTPRD-207ENST00000463477 CHRM2P08172 466 aa8.66□□□□□ -1.02
PTPRD-207ENST00000463477 QDPRP09417 244 aa8.66□□□□□ -1.02
PTPRD-207ENST00000463477 UBBP0CG47 229 aa8.66□□□□□ -1.02
PTPRD-207ENST00000463477 OR3A3P47888 321 aa8.66□□□□□ -1.02
PTPRD-207ENST00000463477 CSNK2A1P68400 391 aaPredicted RBP8.66□□□□□ -1.02
PTPRD-207ENST00000463477 HIST1H3AP68431 136 aa8.66□□□□□ -1.02
PTPRD-207ENST00000463477 SRSF4Q08170 494 aaKnown RBP8.66□□□□□ -1.02
PTPRD-207ENST00000463477 ESCO2Q56NI9 601 aa8.66□□□□□ -1.02
PTPRD-207ENST00000463477 HIST2H3PS2Q5TEC6 136 aa8.66□□□□□ -1.02
PTPRD-207ENST00000463477 HIST2H3AQ71DI3 136 aa8.66□□□□□ -1.02
PTPRD-207ENST00000463477 DOK3Q7L591 496 aa8.66□□□□□ -1.02
PTPRD-207ENST00000463477 PAQR4Q8N4S7 273 aaPredicted RBP8.66□□□□□ -1.02
PTPRD-207ENST00000463477 CCDC120Q96HB5 630 aa8.66□□□□□ -1.02
PTPRD-207ENST00000463477 DMRTA2Q96SC8 542 aa8.66□□□□□ -1.02
PTPRD-207ENST00000463477 PRRT1Q99946 306 aa8.66□□□□□ -1.02
PTPRD-207ENST00000463477 CA10Q9NS85 328 aa8.66□□□□□ -1.02
PTPRD-207ENST00000463477 GLTPQ9NZD2 209 aa8.66□□□□□ -1.02
PTPRD-207ENST00000463477 OPN4Q9UHM6 478 aa8.66□□□□□ -1.02
PTPRD-207ENST00000463477 TMEM82A0PJX8 343 aa8.65□□□□□ -1.02
PTPRD-207ENST00000463477 DISC1C4P0D8 188 aa8.65□□□□□ -1.02
PTPRD-207ENST00000463477 M0R233 179 aa8.65□□□□□ -1.02
PTPRD-207ENST00000463477 ZG16O60844 167 aa8.65□□□□□ -1.02
PTPRD-207ENST00000463477 MPC2O95563 127 aa8.65□□□□□ -1.02
PTPRD-207ENST00000463477 RLN1P04808 185 aa8.65□□□□□ -1.02
PTPRD-207ENST00000463477 HOXD4P09016 255 aaPredicted RBP8.65□□□□□ -1.02
PTPRD-207ENST00000463477 VSIG8P0DPA2 414 aa8.65□□□□□ -1.02
PTPRD-207ENST00000463477 ZNF20P17024 532 aa8.65□□□□□ -1.02
PTPRD-207ENST00000463477 AGAP20933 346 aa8.65□□□□□ -1.02
PTPRD-207ENST00000463477 MSR1P21757 451 aa8.65□□□□□ -1.02
PTPRD-207ENST00000463477 NFYAP23511 347 aaPredicted RBP8.65□□□□□ -1.02
PTPRD-207ENST00000463477 SFTPDP35247 375 aa8.65□□□□□ -1.02
PTPRD-207ENST00000463477 ALDH3B1P43353 468 aa8.65□□□□□ -1.02
PTPRD-207ENST00000463477 UNC119Q13432 240 aa8.65□□□□□ -1.02
PTPRD-207ENST00000463477 TMEM211Q6ICI0 200 aa8.65□□□□□ -1.02
PTPRD-207ENST00000463477 LPCAT3Q6P1A2 487 aa8.65□□□□□ -1.02
PTPRD-207ENST00000463477 GPAT4Q86UL3 456 aa8.65□□□□□ -1.02
PTPRD-207ENST00000463477 CD163Q86VB7 1156 aa8.65□□□□□ -1.02
PTPRD-207ENST00000463477 ZNF584Q8IVC4 421 aa8.65□□□□□ -1.02
PTPRD-207ENST00000463477 MUC20Q8N307 709 aaPredicted RBP8.65□□□□□ -1.02
PTPRD-207ENST00000463477 ZDHHC22Q8N966 263 aa8.65□□□□□ -1.02
PTPRD-207ENST00000463477 OR8B12Q8NGG6 310 aa8.65□□□□□ -1.02
PTPRD-207ENST00000463477 OR52N4Q8NGI2 321 aa8.65□□□□□ -1.02
PTPRD-207ENST00000463477 C10orf35Q96D05 121 aa8.65□□□□□ -1.02
PTPRD-207ENST00000463477 SF3B5Q9BWJ5 86 aaKnown RBP8.65□□□□□ -1.02
PTPRD-207ENST00000463477 NELFAQ9H3P2 528 aa8.65□□□□□ -1.02
PTPRD-207ENST00000463477 EXO5Q9H790 373 aa8.65□□□□□ -1.02
PTPRD-207ENST00000463477 TMEM185BQ9H7F4 350 aa8.65□□□□□ -1.02
PTPRD-207ENST00000463477 SEC61A2Q9H9S3 476 aa8.65□□□□□ -1.02
PTPRD-207ENST00000463477 SPRR3Q9UBC9 169 aa8.65□□□□□ -1.02
PTPRD-207ENST00000463477 UBQLN2Q9UHD9 624 aa8.65□□□□□ -1.02
PTPRD-207ENST00000463477 SH3BGRL2Q9UJC5 107 aa8.65□□□□□ -1.02
PTPRD-207ENST00000463477 ANAPC10Q9UM13 185 aa8.65□□□□□ -1.02
PTPRD-207ENST00000463477 SETXQ7Z333 2677 aaKnown RBP8.65□□□□□ -1.02
PTPRD-207ENST00000463477 A0A0U1RQV5 110 aa8.65□□□□□ -1.03
PTPRD-207ENST00000463477 RPS10-NUDT3A0A1W2PQS6 291 aa8.65□□□□□ -1.03
PTPRD-207ENST00000463477 FIGNL2A6NMB9 653 aa8.65□□□□□ -1.03
PTPRD-207ENST00000463477 GJE1A6NN92 205 aa8.65□□□□□ -1.03
PTPRD-207ENST00000463477 MCRIP1C9JLW8 97 aa8.65□□□□□ -1.03
PTPRD-207ENST00000463477 F5H5P2 479 aa8.65□□□□□ -1.03
PTPRD-207ENST00000463477 ZIC3O60481 467 aa8.65□□□□□ -1.03
PTPRD-207ENST00000463477 WDR1O75083 606 aa8.65□□□□□ -1.03
PTPRD-207ENST00000463477 TSC22D2O75157 780 aa8.65□□□□□ -1.03
PTPRD-207ENST00000463477 APOC1P02654 83 aa8.65□□□□□ -1.03
PTPRD-207ENST00000463477 AMY2AP04746 511 aa8.65□□□□□ -1.03
PTPRD-207ENST00000463477 GSTP1P09211 210 aaKnown RBP8.65□□□□□ -1.03
PTPRD-207ENST00000463477 HLA-GP17693 338 aa8.65□□□□□ -1.03
PTPRD-207ENST00000463477 SRD5A2P31213 254 aa8.65□□□□□ -1.03
PTPRD-207ENST00000463477 OTX1P32242 354 aaPredicted RBP8.65□□□□□ -1.03
PTPRD-207ENST00000463477 ZNF93P35789 620 aaPredicted RBP8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms