RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 A0A096LPE4 126 aa12.62□□□□□ -0.39
HDAC6-213ENST00000462730 A0A1W2PPZ6 126 aa12.62□□□□□ -0.39
HDAC6-213ENST00000462730 ZNHIT1O43257 154 aa12.62□□□□□ -0.39
HDAC6-213ENST00000462730 LCATP04180 440 aa12.62□□□□□ -0.39
HDAC6-213ENST00000462730 FAHP16930 419 aa12.62□□□□□ -0.39
HDAC6-213ENST00000462730 RAB6AP20340 208 aa12.62□□□□□ -0.39
HDAC6-213ENST00000462730 SSTR2P30874 369 aa12.62□□□□□ -0.39
HDAC6-213ENST00000462730 FOXG1P55316 489 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-213ENST00000462730 ZP1P60852 638 aa12.62□□□□□ -0.39
HDAC6-213ENST00000462730 EXOSC2Q13868 293 aaKnown RBP12.62□□□□□ -0.39
HDAC6-213ENST00000462730 AWAT2Q6E213 333 aa12.62□□□□□ -0.39
HDAC6-213ENST00000462730 GALNT11Q8NCW6 608 aa12.62□□□□□ -0.39
HDAC6-213ENST00000462730 CCDC54Q8NEL0 328 aa12.62□□□□□ -0.39
HDAC6-213ENST00000462730 PTX4Q96A99 478 aa12.62□□□□□ -0.39
HDAC6-213ENST00000462730 SGK3Q96BR1 496 aa12.62□□□□□ -0.39
HDAC6-213ENST00000462730 DPCDQ9BVM2 203 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-213ENST00000462730 HRASLSQ9HDD0 168 aa12.62□□□□□ -0.39
HDAC6-213ENST00000462730 RAB22AQ9UL26 194 aa12.62□□□□□ -0.39
HDAC6-213ENST00000462730 PIGLQ9Y2B2 252 aa12.62□□□□□ -0.39
HDAC6-213ENST00000462730 NPTNQ9Y639 398 aa12.62□□□□□ -0.39
HDAC6-213ENST00000462730 RPS10-NUDT3A0A1W2PQS6 291 aa12.61□□□□□ -0.39
HDAC6-213ENST00000462730 ANKRD20A5PA0PJZ0 165 aa12.61□□□□□ -0.39
HDAC6-213ENST00000462730 MKRN2OSH3BPM6 223 aa12.61□□□□□ -0.39
HDAC6-213ENST00000462730 K7ENP7 123 aa12.61□□□□□ -0.39
HDAC6-213ENST00000462730 AQP7O14520 342 aa12.61□□□□□ -0.39
HDAC6-213ENST00000462730 MPC2O95563 127 aa12.61□□□□□ -0.39
HDAC6-213ENST00000462730 IL32P24001 234 aa12.61□□□□□ -0.39
HDAC6-213ENST00000462730 GUCA2AQ02747 115 aa12.61□□□□□ -0.39
HDAC6-213ENST00000462730 PABPC1L2AQ5JQF8 200 aa12.61□□□□□ -0.39
HDAC6-213ENST00000462730 INO80CQ6PI98 192 aaPredicted RBP12.61□□□□□ -0.39
HDAC6-213ENST00000462730 DNM1P46Q6ZS02 220 aa12.61□□□□□ -0.39
HDAC6-213ENST00000462730 Q6ZSR3 168 aa12.61□□□□□ -0.39
HDAC6-213ENST00000462730 RBMXL3Q8N7X1 1067 aaKnown RBP12.61□□□□□ -0.39
HDAC6-213ENST00000462730 OR2AE1Q8NHA4 323 aa12.61□□□□□ -0.39
HDAC6-213ENST00000462730 REEP6Q96HR9 211 aa12.61□□□□□ -0.39
HDAC6-213ENST00000462730 MRPS28Q9Y2Q9 187 aaKnown RBP12.61□□□□□ -0.39
HDAC6-213ENST00000462730 ZNF175Q9Y473 711 aa12.61□□□□□ -0.39
HDAC6-213ENST00000462730 URB1O60287 2271 aaKnown RBP12.61□□□□□ -0.39
HDAC6-213ENST00000462730 ANKRD11Q6UB99 2663 aaPredicted RBP12.61□□□□□ -0.39
HDAC6-213ENST00000462730 IGKV1-9A0A0C4DH69 117 aa12.61□□□□□ -0.39
HDAC6-213ENST00000462730 RRP8O43159 456 aaKnown RBP12.61□□□□□ -0.39
HDAC6-213ENST00000462730 PEX14O75381 377 aa12.61□□□□□ -0.39
HDAC6-213ENST00000462730 AGTR1P30556 359 aa12.61□□□□□ -0.39
HDAC6-213ENST00000462730 PRSS3P35030 304 aa12.61□□□□□ -0.39
HDAC6-213ENST00000462730 RAB14P61106 215 aa12.61□□□□□ -0.39
HDAC6-213ENST00000462730 UNC119Q13432 240 aa12.61□□□□□ -0.39
HDAC6-213ENST00000462730 P4HA3Q7Z4N8 544 aa12.61□□□□□ -0.39
HDAC6-213ENST00000462730 ANGPTL5Q86XS5 388 aa12.61□□□□□ -0.39
HDAC6-213ENST00000462730 ACBD4Q8NC06 268 aa12.61□□□□□ -0.39
HDAC6-213ENST00000462730 LILRB1Q8NHL6 650 aaPredicted RBP12.61□□□□□ -0.39
HDAC6-213ENST00000462730 ZNF436Q9C0F3 470 aaPredicted RBP12.61□□□□□ -0.39
HDAC6-213ENST00000462730 C12orf49Q9H741 205 aa12.61□□□□□ -0.39
HDAC6-213ENST00000462730 BEX1Q9HBH7 125 aa12.61□□□□□ -0.39
HDAC6-213ENST00000462730 PLSCR2Q9NRY7 297 aa12.61□□□□□ -0.39
HDAC6-213ENST00000462730 ZNF224Q9NZL3 707 aa12.61□□□□□ -0.39
HDAC6-213ENST00000462730 DKK4Q9UBT3 224 aa12.61□□□□□ -0.39
HDAC6-213ENST00000462730 PRSS50Q9UI38 385 aa12.61□□□□□ -0.39
HDAC6-213ENST00000462730 NAP1L6A6NFF2 107 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 G3V3Q6 166 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 H7C417 338 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 RBBP9O75884 186 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 HPXP02790 462 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 ALDOBP05062 364 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 VSIG8P0DPA2 414 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 FCGR2AP12318 317 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 OR3A4PP47883 348 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 QRFPP83859 136 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 GRK1Q15835 563 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 MOGAT2Q3SYC2 334 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 TMEM255AQ5JRV8 349 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 OLFML2AQ68BL7 652 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 FAM122CQ6P4D5 195 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 GLIPR1L1Q6UWM5 242 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 SEZ6L2Q6UXD5 910 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 LURAP1LQ8IV03 231 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 CDH26Q8IXH8 852 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 OR2T35Q8NGX2 323 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 LHFPL5Q8TAF8 219 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 NPRL2Q8WTW4 380 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 FAM46BQ96A09 425 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 GPER1Q99527 375 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 NKIRAS2Q9NYR9 191 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 CLCF1Q9UBD9 225 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 MTFP1Q9UDX5 166 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 UBQLN2Q9UHD9 624 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 LHX6Q9UPM6 363 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 A0A0A6YYH2 397 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 MEIS3P1A6NDR6 274 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 A6NJ64 397 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 I3L521 148 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 GMDSO60547 372 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 TSPAN9O75954 239 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 PRF1P14222 555 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 FOSL1P15407 271 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 PCGF3Q3KNV8 242 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 DMRTC1Q5HYR2 192 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 COMMD7Q86VX2 200 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 ZNF101Q8IZC7 436 aa12.6□□□□□ -0.39
HDAC6-213ENST00000462730 PAQR4Q8N4S7 273 aaPredicted RBP12.6□□□□□ -0.39
HDAC6-213ENST00000462730 CPEB3Q8NE35 698 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms