RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 CNBD2Q96M20 576 aa14.14□□□□□ -0.15
TOP3A-202ENST00000461127 GPX7Q96SL4 187 aaPredicted RBP14.14□□□□□ -0.15
TOP3A-202ENST00000461127 TVP23BQ9NYZ1 205 aa14.14□□□□□ -0.15
TOP3A-202ENST00000461127 ONECUT1Q9UBC0 465 aa14.14□□□□□ -0.15
TOP3A-202ENST00000461127 SIGLEC9Q9Y336 463 aa14.14□□□□□ -0.15
TOP3A-202ENST00000461127 NOP16Q9Y3C1 178 aaKnown RBP14.14□□□□□ -0.15
TOP3A-202ENST00000461127 LRRC42Q9Y546 428 aa14.14□□□□□ -0.15
TOP3A-202ENST00000461127 IER3IP1Q9Y5U9 82 aa14.14□□□□□ -0.15
TOP3A-202ENST00000461127 RIIAD1A6NNX1 92 aa14.13□□□□□ -0.15
TOP3A-202ENST00000461127 BHLHE40O14503 412 aa14.13□□□□□ -0.15
TOP3A-202ENST00000461127 CLIC3O95833 236 aa14.13□□□□□ -0.15
TOP3A-202ENST00000461127 IFNGP01579 166 aa14.13□□□□□ -0.15
TOP3A-202ENST00000461127 DBHP09172 617 aa14.13□□□□□ -0.15
TOP3A-202ENST00000461127 GNAO1P09471 354 aa14.13□□□□□ -0.15
TOP3A-202ENST00000461127 IL5RAQ01344 420 aa14.13□□□□□ -0.15
TOP3A-202ENST00000461127 SNAPC1Q16533 368 aa14.13□□□□□ -0.15
TOP3A-202ENST00000461127 ZNF691Q5VV52 312 aa14.13□□□□□ -0.15
TOP3A-202ENST00000461127 PRAMEF6Q5VXH4 476 aa14.13□□□□□ -0.15
TOP3A-202ENST00000461127 FOXB2Q5VYV0 432 aa14.13□□□□□ -0.15
TOP3A-202ENST00000461127 C12orf73Q69YU5 71 aa14.13□□□□□ -0.15
TOP3A-202ENST00000461127 METAP1DQ6UB28 335 aaPredicted RBP14.13□□□□□ -0.15
TOP3A-202ENST00000461127 LNX2Q8N448 690 aa14.13□□□□□ -0.15
TOP3A-202ENST00000461127 LRRC75AQ8NAA5 344 aa14.13□□□□□ -0.15
TOP3A-202ENST00000461127 OR4F17Q8NGA8 305 aa14.13□□□□□ -0.15
TOP3A-202ENST00000461127 ITPKCQ96DU7 683 aa14.13□□□□□ -0.15
TOP3A-202ENST00000461127 OR4F4Q96R69 305 aa14.13□□□□□ -0.15
TOP3A-202ENST00000461127 ANKRD60Q9BZ19 345 aa14.13□□□□□ -0.15
TOP3A-202ENST00000461127 NRIP3Q9NQ35 241 aa14.13□□□□□ -0.15
TOP3A-202ENST00000461127 GRHPRQ9UBQ7 328 aa14.13□□□□□ -0.15
TOP3A-202ENST00000461127 RPUSD1Q9UJJ7 312 aaKnown RBP14.13□□□□□ -0.15
TOP3A-202ENST00000461127 OOEPA6NGQ2 149 aa14.12□□□□□ -0.15
TOP3A-202ENST00000461127 H7C1C5 153 aa14.12□□□□□ -0.15
TOP3A-202ENST00000461127 DVL1O14640 695 aa14.12□□□□□ -0.15
TOP3A-202ENST00000461127 NPFFO15130 113 aa14.12□□□□□ -0.15
TOP3A-202ENST00000461127 DENRO43583 198 aaKnown RBP14.12□□□□□ -0.15
TOP3A-202ENST00000461127 IDH3BO43837 385 aa14.12□□□□□ -0.15
TOP3A-202ENST00000461127 LCN6P62502 163 aa14.12□□□□□ -0.15
TOP3A-202ENST00000461127 MED21Q13503 144 aa14.12□□□□□ -0.15
TOP3A-202ENST00000461127 MPPED2Q15777 294 aa14.12□□□□□ -0.15
TOP3A-202ENST00000461127 SLC35F1Q5T1Q4 408 aa14.12□□□□□ -0.15
TOP3A-202ENST00000461127 GPR139Q6DWJ6 353 aa14.12□□□□□ -0.15
TOP3A-202ENST00000461127 PTCHD4Q6ZW05 846 aa14.12□□□□□ -0.15
TOP3A-202ENST00000461127 ST8SIA4Q92187 359 aa14.12□□□□□ -0.15
TOP3A-202ENST00000461127 R3HDM4Q96D70 268 aa14.12□□□□□ -0.15
TOP3A-202ENST00000461127 WDR76Q9H967 626 aa14.12□□□□□ -0.15
TOP3A-202ENST00000461127 ADAM18Q9Y3Q7 739 aa14.12□□□□□ -0.15
TOP3A-202ENST00000461127 HSPE1-MOB4S4R3N1 261 aa14.12□□□□□ -0.15
TOP3A-202ENST00000461127 TEX13CA0A0J9YWL9 993 aa14.11□□□□□ -0.15
TOP3A-202ENST00000461127 E9PQ18 207 aa14.11□□□□□ -0.15
TOP3A-202ENST00000461127 XKRYO14609 159 aa14.11□□□□□ -0.15
TOP3A-202ENST00000461127 IMPA2O14732 288 aa14.11□□□□□ -0.15
TOP3A-202ENST00000461127 ARPC3O15145 178 aa14.11□□□□□ -0.15
TOP3A-202ENST00000461127 MPZL2O60487 215 aa14.11□□□□□ -0.15
TOP3A-202ENST00000461127 VSIG10L2P0DP72 767 aa14.11□□□□□ -0.15
TOP3A-202ENST00000461127 MYF6P23409 242 aa14.11□□□□□ -0.15
TOP3A-202ENST00000461127 SDHAP31040 664 aa14.11□□□□□ -0.15
TOP3A-202ENST00000461127 LSM6P62312 80 aaKnown RBP14.11□□□□□ -0.15
TOP3A-202ENST00000461127 THAP5Q7Z6K1 395 aa14.11□□□□□ -0.15
TOP3A-202ENST00000461127 LYG1Q8N1E2 194 aa14.11□□□□□ -0.15
TOP3A-202ENST00000461127 DNAH3Q8TD57 4116 aa14.11□□□□□ -0.15
TOP3A-202ENST00000461127 SLC22A4Q9H015 551 aa14.11□□□□□ -0.15
TOP3A-202ENST00000461127 RANBP3Q9H6Z4 567 aaPredicted RBP14.11□□□□□ -0.15
TOP3A-202ENST00000461127 RAB18Q9NP72 206 aa14.11□□□□□ -0.15
TOP3A-202ENST00000461127 MEIOCA2RUB1 952 aa14.1□□□□□ -0.15
TOP3A-202ENST00000461127 M0R129 80 aa14.1□□□□□ -0.15
TOP3A-202ENST00000461127 AHCYL1O43865 530 aa14.1□□□□□ -0.15
TOP3A-202ENST00000461127 FBXO24O75426 580 aa14.1□□□□□ -0.15
TOP3A-202ENST00000461127 GYPAP02724 150 aa14.1□□□□□ -0.15
TOP3A-202ENST00000461127 ZNF3P17036 446 aa14.1□□□□□ -0.15
TOP3A-202ENST00000461127 PAICSP22234 425 aaKnown RBP14.1□□□□□ -0.15
TOP3A-202ENST00000461127 KRR1Q13601 381 aaKnown RBP14.1□□□□□ -0.15
TOP3A-202ENST00000461127 OR8G1Q15617 311 aa14.1□□□□□ -0.15
TOP3A-202ENST00000461127 CCDC92Q53HC0 331 aaPredicted RBP14.1□□□□□ -0.15
TOP3A-202ENST00000461127 DEFB121Q5J5C9 76 aa14.1□□□□□ -0.15
TOP3A-202ENST00000461127 TCEANCQ8N8B7 351 aa14.1□□□□□ -0.15
TOP3A-202ENST00000461127 OR8J1Q8NGP2 316 aa14.1□□□□□ -0.15
TOP3A-202ENST00000461127 SPRYD4Q8WW59 207 aaPredicted RBP14.1□□□□□ -0.15
TOP3A-202ENST00000461127 TRUB1Q8WWH5 349 aaKnown RBP14.1□□□□□ -0.15
TOP3A-202ENST00000461127 Q96M85 177 aa14.1□□□□□ -0.15
TOP3A-202ENST00000461127 DMRTB1Q96MA1 342 aa14.1□□□□□ -0.15
TOP3A-202ENST00000461127 IL4I1Q96RQ9 567 aa14.1□□□□□ -0.15
TOP3A-202ENST00000461127 FAM234AQ9H0X4 552 aa14.1□□□□□ -0.15
TOP3A-202ENST00000461127 MMP28Q9H239 520 aa14.1□□□□□ -0.15
TOP3A-202ENST00000461127 SIRT7Q9NRC8 400 aa14.1□□□□□ -0.15
TOP3A-202ENST00000461127 CMC2Q9NRP2 79 aa14.1□□□□□ -0.15
TOP3A-202ENST00000461127 POLR1DQ9Y2S0 133 aa14.1□□□□□ -0.15
TOP3A-202ENST00000461127 RER1O15258 196 aa14.09□□□□□ -0.15
TOP3A-202ENST00000461127 PRKYO43930 277 aa14.09□□□□□ -0.15
TOP3A-202ENST00000461127 TXNDC12O95881 172 aa14.09□□□□□ -0.15
TOP3A-202ENST00000461127 HOXA4Q00056 320 aaPredicted RBP14.09□□□□□ -0.15
TOP3A-202ENST00000461127 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.09□□□□□ -0.15
TOP3A-202ENST00000461127 ADCK1Q86TW2 530 aa14.09□□□□□ -0.15
TOP3A-202ENST00000461127 ENTHD1Q8IYW4 607 aa14.09□□□□□ -0.15
TOP3A-202ENST00000461127 PLPP7Q8NBV4 271 aa14.09□□□□□ -0.15
TOP3A-202ENST00000461127 OR4K13Q8NH42 304 aa14.09□□□□□ -0.15
TOP3A-202ENST00000461127 PPP1R35Q8TAP8 253 aa14.09□□□□□ -0.15
TOP3A-202ENST00000461127 TMEM163Q8TC26 289 aa14.09□□□□□ -0.15
TOP3A-202ENST00000461127 OTULINQ96BN8 352 aa14.09□□□□□ -0.15
TOP3A-202ENST00000461127 COQ7Q99807 217 aa14.09□□□□□ -0.15
TOP3A-202ENST00000461127 OCSTAMPQ9BR26 566 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms