RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 PTNP21246 168 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 DRD5P21918 477 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 UQCRC2P22695 453 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 AQP1P29972 269 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 MC5RP33032 325 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 RPL3P39023 403 aaKnown RBP4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 MRPL19P49406 292 aaKnown RBP4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 FHITP49789 147 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 RAB5CP51148 216 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 ATP4BP51164 291 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 RAP1BP61224 184 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 HOXC5Q00444 222 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 ACSM1Q08AH1 577 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 TSPAN31Q12999 210 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 C3AR1Q16581 482 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 TATDN3Q17R31 274 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 EIPR1Q53HC9 387 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 NHLRC3Q5JS37 347 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 SAMD4BQ5PRF9 694 aaKnown RBP4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 NXNL2Q5VZ03 156 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 GGNBP1Q5YKI7 109 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 PLET1Q6UQ28 207 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 IGFL3Q6UXB1 125 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 CLEC18BQ6UXF7 455 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 C3P1Q6ZMU1 363 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 SLC16A13Q7RTY0 426 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 YRDCQ86U90 279 aaKnown RBP4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 VRK2Q86Y07 508 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 SLC34A3Q8N130 599 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 SVBPQ8N300 66 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 RNF148Q8N7C7 305 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 ZNF614Q8N883 585 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 COX18Q8N8Q8 333 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 CLEC18CQ8NCF0 446 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 TMEM104Q8NE00 496 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 DUSP18Q8NEJ0 188 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 BBS1Q8NFJ9 593 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 OR2M7Q8NG81 312 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 OR2D3Q8NGH3 330 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 OR5L2Q8NGL0 311 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 SPPL2AQ8TCT8 520 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 SFXN5Q8TD22 340 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 HAS2Q92819 552 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 LGALS12Q96DT0 336 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 NEURL3Q96EH8 262 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 BSCL2Q96G97 398 aaPredicted RBP4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 ITCHQ96J02 903 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 COL21A1Q96P44 957 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 MS4A4EQ96PG1 132 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 ERMAPQ96PL5 475 aaPredicted RBP4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 CITED2Q99967 270 aaPredicted RBP4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 WFDC6Q9BQY6 131 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 SLC30A2Q9BRI3 323 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 ZNF2Q9BSG1 426 aaPredicted RBP4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 SF3B5Q9BWJ5 86 aaKnown RBP4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 UGT2B28Q9BY64 529 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 KRTAP2-2Q9BYT5 123 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 DCSTAMPQ9H295 470 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 PPIL3Q9H2H8 161 aaKnown RBP4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 SLCO5A1Q9H2Y9 848 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 KCNK15Q9H427 330 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 TPT1P8Q9HAU6 139 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 SH2D2AQ9NP31 389 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 AGPAT4Q9NRZ5 378 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 MSRB1Q9NZV6 116 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 PRODH2Q9UF12 536 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 FBXL2Q9UKC9 423 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 NPIPA1Q9UND3 350 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 TPRKBQ9Y3C4 175 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 GOLT1BQ9Y3E0 138 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 U3KQV3 271 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 ALPK2Q86TB3 2170 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 MPDZO75970 2070 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 ATRQ13535 2644 aa4.2□□□□□ -1.74
ATPAF1-203ENST00000460928 DOCK7Q96N67 2140 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 PRR14LQ5THK1 2151 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 A0A096LPI6 279 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 TRAV17A0A0B4J275 112 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 XKRY2A2RUG3 117 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 BTBD17A6NE02 478 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 OR2AT4A6NND4 320 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 EFCAB9A8MZ26 197 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 H0Y8G0 127 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 NME4O00746 187 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 SOCS2O14508 198 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 IMPA2O14732 288 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 PDCD5O14737 125 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 SURF4O15260 269 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 DLEU1O43261 78 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 SPRY1O43609 319 aaPredicted RBP4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 TPST1O60507 370 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 CDC40O60508 579 aaKnown RBP eCLIP4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 GGCTO75223 188 aaKnown RBP4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 GCM2O75603 506 aaPredicted RBP4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 SC5DO75845 299 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 GADD45GO95257 159 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 IFNA17P01571 189 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 PPBPP02775 128 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 OPN1SWP03999 348 aa4.19□□□□□ -1.74
ATPAF1-203ENST00000460928 BCHEP06276 602 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms