RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 KLF17Q5JT82 389 aaPredicted RBP13.42□□□□□ -0.26
COL7A1-203ENST00000459756 CD276Q5ZPR3 534 aa13.42□□□□□ -0.26
COL7A1-203ENST00000459756 ZNF322Q6U7Q0 402 aaPredicted RBP13.42□□□□□ -0.26
COL7A1-203ENST00000459756 WDR82Q6UXN9 313 aa13.42□□□□□ -0.26
COL7A1-203ENST00000459756 KRT74Q7RTS7 529 aa13.42□□□□□ -0.26
COL7A1-203ENST00000459756 SLC35F2Q8IXU6 374 aa13.42□□□□□ -0.26
COL7A1-203ENST00000459756 CBR4Q8N4T8 237 aa13.42□□□□□ -0.26
COL7A1-203ENST00000459756 LRRC29Q8WV35 223 aa13.42□□□□□ -0.26
COL7A1-203ENST00000459756 OR5P3Q8WZ94 311 aa13.42□□□□□ -0.26
COL7A1-203ENST00000459756 PIGCQ92535 297 aa13.42□□□□□ -0.26
COL7A1-203ENST00000459756 NUDT16L1Q9BRJ7 211 aaKnown RBP13.42□□□□□ -0.26
COL7A1-203ENST00000459756 PBOV1Q9GZY1 135 aa13.42□□□□□ -0.26
COL7A1-203ENST00000459756 PPP1R3EQ9H7J1 279 aa13.42□□□□□ -0.26
COL7A1-203ENST00000459756 CLN6Q9NWW5 311 aa13.42□□□□□ -0.26
COL7A1-203ENST00000459756 CTSZQ9UBR2 303 aa13.42□□□□□ -0.26
COL7A1-203ENST00000459756 WARS2Q9UGM6 360 aaKnown RBP13.42□□□□□ -0.26
COL7A1-203ENST00000459756 NUFIP1Q9UHK0 495 aaKnown RBP13.42□□□□□ -0.26
COL7A1-203ENST00000459756 ZNF816-ZNF321PA0A0X1KG74 233 aa13.41□□□□□ -0.26
COL7A1-203ENST00000459756 ZNF670-ZNF695F2Z2N8 137 aa13.41□□□□□ -0.26
COL7A1-203ENST00000459756 TRIM77I1YAP6 450 aa13.41□□□□□ -0.26
COL7A1-203ENST00000459756 ENSAO43768 121 aaKnown RBP13.41□□□□□ -0.26
COL7A1-203ENST00000459756 EGR1P18146 543 aa13.41□□□□□ -0.26
COL7A1-203ENST00000459756 POLR2IP36954 125 aaKnown RBP13.41□□□□□ -0.26
COL7A1-203ENST00000459756 ELF3P78545 371 aaPredicted RBP13.41□□□□□ -0.26
COL7A1-203ENST00000459756 EGR3Q06889 387 aa13.41□□□□□ -0.26
COL7A1-203ENST00000459756 MICBQ29980 383 aa13.41□□□□□ -0.26
COL7A1-203ENST00000459756 COMMD2Q86X83 199 aa13.41□□□□□ -0.26
COL7A1-203ENST00000459756 FAM90A1Q86YD7 464 aa13.41□□□□□ -0.26
COL7A1-203ENST00000459756 ZDHHC23Q8IYP9 409 aa13.41□□□□□ -0.26
COL7A1-203ENST00000459756 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.41□□□□□ -0.26
COL7A1-203ENST00000459756 OR8J1Q8NGP2 316 aa13.41□□□□□ -0.26
COL7A1-203ENST00000459756 C22orf15Q8WYQ4 148 aa13.41□□□□□ -0.26
COL7A1-203ENST00000459756 EME1Q96AY2 570 aa13.41□□□□□ -0.26
COL7A1-203ENST00000459756 UPRTQ96BW1 309 aa13.41□□□□□ -0.26
COL7A1-203ENST00000459756 TECTBQ96PL2 329 aa13.41□□□□□ -0.26
COL7A1-203ENST00000459756 HIST1H2AAQ96QV6 131 aa13.41□□□□□ -0.26
COL7A1-203ENST00000459756 TTTY10Q9BZA0 68 aa13.41□□□□□ -0.26
COL7A1-203ENST00000459756 MOB1AQ9H8S9 216 aa13.41□□□□□ -0.26
COL7A1-203ENST00000459756 ORC6Q9Y5N6 252 aa13.41□□□□□ -0.26
COL7A1-203ENST00000459756 ANK2Q01484 3957 aa13.4□□□□□ -0.26
COL7A1-203ENST00000459756 H0YHG0 523 aa13.4□□□□□ -0.26
COL7A1-203ENST00000459756 CDIPTO14735 213 aa13.4□□□□□ -0.26
COL7A1-203ENST00000459756 IGLV3-1P01715 115 aa13.4□□□□□ -0.26
COL7A1-203ENST00000459756 GYPAP02724 150 aa13.4□□□□□ -0.26
COL7A1-203ENST00000459756 LIPFP07098 398 aa13.4□□□□□ -0.26
COL7A1-203ENST00000459756 HTR1FP30939 366 aa13.4□□□□□ -0.26
COL7A1-203ENST00000459756 RIPPLY1Q0D2K3 151 aa13.4□□□□□ -0.26
COL7A1-203ENST00000459756 POU4F2Q12837 409 aa13.4□□□□□ -0.26
COL7A1-203ENST00000459756 LRRC36Q1X8D7 754 aa13.4□□□□□ -0.26
COL7A1-203ENST00000459756 TUSC1Q2TAM9 212 aa13.4□□□□□ -0.26
COL7A1-203ENST00000459756 C11orf91Q3C1V1 193 aa13.4□□□□□ -0.26
COL7A1-203ENST00000459756 ZIK1Q3SY52 487 aaPredicted RBP13.4□□□□□ -0.26
COL7A1-203ENST00000459756 FAM76BQ5HYJ3 339 aa13.4□□□□□ -0.26
COL7A1-203ENST00000459756 ZBTB37Q5TC79 503 aa13.4□□□□□ -0.26
COL7A1-203ENST00000459756 RBMS3Q6XE24 437 aaKnown RBP13.4□□□□□ -0.26
COL7A1-203ENST00000459756 OR10Z1Q8NGY1 313 aa13.4□□□□□ -0.26
COL7A1-203ENST00000459756 OR51E1Q8TCB6 317 aa13.4□□□□□ -0.26
COL7A1-203ENST00000459756 FAM216AQ8WUB2 273 aa13.4□□□□□ -0.26
COL7A1-203ENST00000459756 HPSE2Q8WWQ2 592 aa13.4□□□□□ -0.26
COL7A1-203ENST00000459756 C12orf43Q96C57 262 aaKnown RBP13.4□□□□□ -0.26
COL7A1-203ENST00000459756 RNF170Q96K19 258 aa13.4□□□□□ -0.26
COL7A1-203ENST00000459756 APOL4Q9BPW4 351 aa13.4□□□□□ -0.26
COL7A1-203ENST00000459756 C9orf16Q9BUW7 83 aa13.4□□□□□ -0.26
COL7A1-203ENST00000459756 GPR84Q9NQS5 396 aa13.4□□□□□ -0.26
COL7A1-203ENST00000459756 KAAG1Q9UBP8 84 aa13.4□□□□□ -0.26
COL7A1-203ENST00000459756 ZNF69Q9UC07 566 aa13.4□□□□□ -0.26
COL7A1-203ENST00000459756 IGHV3OR15-7A0A075B7D8 119 aa13.39□□□□□ -0.27
COL7A1-203ENST00000459756 SRRM5B3KS81 715 aa13.39□□□□□ -0.27
COL7A1-203ENST00000459756 C22orf46C9J442 243 aa13.39□□□□□ -0.27
COL7A1-203ENST00000459756 LOC110117498-PIK3R3F6TDL0 507 aa13.39□□□□□ -0.27
COL7A1-203ENST00000459756 TMPRSS2O15393 492 aa13.39□□□□□ -0.27
COL7A1-203ENST00000459756 SRSF10O75494 262 aaKnown RBP13.39□□□□□ -0.27
COL7A1-203ENST00000459756 ALPLP05186 524 aa13.39□□□□□ -0.27
COL7A1-203ENST00000459756 CDC42P60953 191 aa13.39□□□□□ -0.27
COL7A1-203ENST00000459756 MFGE8Q08431 387 aaPredicted RBP13.39□□□□□ -0.27
COL7A1-203ENST00000459756 TMED1Q13445 227 aa13.39□□□□□ -0.27
COL7A1-203ENST00000459756 CEACAM21Q3KPI0 293 aa13.39□□□□□ -0.27
COL7A1-203ENST00000459756 BCL2L15Q5TBC7 163 aa13.39□□□□□ -0.27
COL7A1-203ENST00000459756 LPCAT4Q643R3 524 aa13.39□□□□□ -0.27
COL7A1-203ENST00000459756 KCTD8Q6ZWB6 473 aa13.39□□□□□ -0.27
COL7A1-203ENST00000459756 THAP5Q7Z6K1 395 aa13.39□□□□□ -0.27
COL7A1-203ENST00000459756 SCCPDHQ8NBX0 429 aa13.39□□□□□ -0.27
COL7A1-203ENST00000459756 OR51G2Q8NGK0 314 aa13.39□□□□□ -0.27
COL7A1-203ENST00000459756 RFKQ969G6 155 aa13.39□□□□□ -0.27
COL7A1-203ENST00000459756 FAM71F1Q96KD3 344 aaPredicted RBP13.39□□□□□ -0.27
COL7A1-203ENST00000459756 SMURF1Q9HCE7 757 aa13.39□□□□□ -0.27
COL7A1-203ENST00000459756 R4GMQ9 66 aa13.39□□□□□ -0.27
COL7A1-203ENST00000459756 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.38□□□□□ -0.27
COL7A1-203ENST00000459756 DVL1O14640 695 aa13.38□□□□□ -0.27
COL7A1-203ENST00000459756 MTRF1O75570 445 aaKnown RBP13.38□□□□□ -0.27
COL7A1-203ENST00000459756 ECDO95905 644 aaPredicted RBP13.38□□□□□ -0.27
COL7A1-203ENST00000459756 TTRP02766 147 aa13.38□□□□□ -0.27
COL7A1-203ENST00000459756 OR2T7P0C7T2 308 aa13.38□□□□□ -0.27
COL7A1-203ENST00000459756 IGHV4-38-2P0DP08 117 aa13.38□□□□□ -0.27
COL7A1-203ENST00000459756 ALDH3A2P51648 485 aa13.38□□□□□ -0.27
COL7A1-203ENST00000459756 GNG3P63215 75 aa13.38□□□□□ -0.27
COL7A1-203ENST00000459756 ZBTB49Q6ZSB9 765 aa13.38□□□□□ -0.27
COL7A1-203ENST00000459756 C9orf139Q6ZV77 190 aa13.38□□□□□ -0.27
COL7A1-203ENST00000459756 DOK3Q7L591 496 aa13.38□□□□□ -0.27
COL7A1-203ENST00000459756 SLC36A1Q7Z2H8 476 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms