RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 ANKUB1A6NFN9 424 aa17.66■□□□□ 0.42
SNX27-204ENST00000458013 M0R1X1 148 aa17.66■□□□□ 0.42
SNX27-204ENST00000458013 CEACAM5P06731 702 aa17.66■□□□□ 0.42
SNX27-204ENST00000458013 RPS4XP62701 263 aaKnown RBP17.66■□□□□ 0.42
SNX27-204ENST00000458013 OXA1LQ15070 435 aa17.66■□□□□ 0.42
SNX27-204ENST00000458013 OR2G2Q8NGZ5 317 aa17.66■□□□□ 0.42
SNX27-204ENST00000458013 UQCC2Q9BRT2 126 aa17.66■□□□□ 0.42
SNX27-204ENST00000458013 SCPEP1Q9HB40 452 aa17.66■□□□□ 0.42
SNX27-204ENST00000458013 CCDC187A0A096LP49 1063 aa17.66■□□□□ 0.42
SNX27-204ENST00000458013 SBK3P0C264 359 aa17.66■□□□□ 0.42
SNX27-204ENST00000458013 PATE4P0C8F1 98 aa17.66■□□□□ 0.42
SNX27-204ENST00000458013 USF1P22415 310 aaPredicted RBP17.66■□□□□ 0.42
SNX27-204ENST00000458013 MIDNQ504T8 468 aa17.66■□□□□ 0.42
SNX27-204ENST00000458013 SLC38A6Q8IZM9 456 aa17.66■□□□□ 0.42
SNX27-204ENST00000458013 KISS1RQ969F8 398 aaPredicted RBP17.66■□□□□ 0.42
SNX27-204ENST00000458013 LRRC61Q9BV99 259 aa17.66■□□□□ 0.42
SNX27-204ENST00000458013 FBXO34Q9NWN3 711 aa17.66■□□□□ 0.42
SNX27-204ENST00000458013 ICAM5Q9UMF0 924 aa17.66■□□□□ 0.42
SNX27-204ENST00000458013 CD37P11049 281 aa17.66■□□□□ 0.42
SNX27-204ENST00000458013 ZBTB25P24278 435 aa17.66■□□□□ 0.42
SNX27-204ENST00000458013 OPRK1P41145 380 aa17.66■□□□□ 0.42
SNX27-204ENST00000458013 FFAR4Q5NUL3 377 aa17.66■□□□□ 0.42
SNX27-204ENST00000458013 TDHQ8IZJ6 230 aa17.66■□□□□ 0.42
SNX27-204ENST00000458013 WDR31Q8NA23 367 aa17.66■□□□□ 0.42
SNX27-204ENST00000458013 RHOFQ9HBH0 211 aa17.66■□□□□ 0.42
SNX27-204ENST00000458013 POMT1Q9Y6A1 747 aa17.66■□□□□ 0.42
SNX27-204ENST00000458013 COX5AP20674 150 aa17.66■□□□□ 0.42
SNX27-204ENST00000458013 OR3A4PP47883 348 aa17.66■□□□□ 0.42
SNX27-204ENST00000458013 RFESDQ8TAC1 157 aa17.66■□□□□ 0.42
SNX27-204ENST00000458013 CACNA1SQ13698 1873 aa17.66■□□□□ 0.42
SNX27-204ENST00000458013 MPZL1O95297 269 aa17.66■□□□□ 0.42
SNX27-204ENST00000458013 EPXP11678 715 aa17.66■□□□□ 0.42
SNX27-204ENST00000458013 PRSS41Q7RTY9 318 aa17.66■□□□□ 0.42
SNX27-204ENST00000458013 LSRQ86X29 649 aaPredicted RBP17.66■□□□□ 0.42
SNX27-204ENST00000458013 OR2T6Q8NHC8 308 aa17.66■□□□□ 0.42
SNX27-204ENST00000458013 UCK1Q9HA47 277 aa17.66■□□□□ 0.42
SNX27-204ENST00000458013 ZNF586Q9NXT0 402 aa17.66■□□□□ 0.42
SNX27-204ENST00000458013 A0A0A6YYD5 115 aa17.65■□□□□ 0.42
SNX27-204ENST00000458013 CRXO43186 299 aaPredicted RBP17.65■□□□□ 0.42
SNX27-204ENST00000458013 FZD2Q14332 565 aa17.65■□□□□ 0.42
SNX27-204ENST00000458013 ZNF429Q86V71 674 aa17.65■□□□□ 0.42
SNX27-204ENST00000458013 FAAP24Q9BTP7 215 aa17.65■□□□□ 0.42
SNX27-204ENST00000458013 SHROOM3Q8TF72 1996 aa17.65■□□□□ 0.42
SNX27-204ENST00000458013 ZNF205O95201 554 aa17.65■□□□□ 0.42
SNX27-204ENST00000458013 GOSR1O95249 250 aa17.65■□□□□ 0.42
SNX27-204ENST00000458013 WNT1P04628 370 aa17.65■□□□□ 0.42
SNX27-204ENST00000458013 SLC37A1P57057 533 aa17.65■□□□□ 0.42
SNX27-204ENST00000458013 OR1C1Q15619 314 aa17.65■□□□□ 0.42
SNX27-204ENST00000458013 RSRP1Q9BUV0 290 aa17.65■□□□□ 0.42
SNX27-204ENST00000458013 BMPR1BO00238 502 aa17.65■□□□□ 0.42
SNX27-204ENST00000458013 FCGR3BO75015 233 aa17.65■□□□□ 0.42
SNX27-204ENST00000458013 DUS4LO95620 317 aaKnown RBP17.65■□□□□ 0.42
SNX27-204ENST00000458013 B4GALNT1Q00973 533 aa17.65■□□□□ 0.42
SNX27-204ENST00000458013 PLA2G2FQ9BZM2 168 aa17.65■□□□□ 0.42
SNX27-204ENST00000458013 APELAP0DMC3 54 aa17.65■□□□□ 0.42
SNX27-204ENST00000458013 HOXB3P14651 431 aaPredicted RBP17.65■□□□□ 0.42
SNX27-204ENST00000458013 H0YIG0 161 aa17.65■□□□□ 0.42
SNX27-204ENST00000458013 BCL2L11O43521 198 aa17.65■□□□□ 0.42
SNX27-204ENST00000458013 DPTQ07507 201 aa17.65■□□□□ 0.42
SNX27-204ENST00000458013 ENDOGQ14249 297 aaKnown RBP17.65■□□□□ 0.42
SNX27-204ENST00000458013 SLC16A12Q6ZSM3 486 aa17.65■□□□□ 0.42
SNX27-204ENST00000458013 ARHGAP5-AS1Q96IT6 56 aa17.65■□□□□ 0.42
SNX27-204ENST00000458013 SH2D7A6NKC9 451 aaPredicted RBP17.64■□□□□ 0.42
SNX27-204ENST00000458013 COX7A1P24310 79 aa17.64■□□□□ 0.42
SNX27-204ENST00000458013 NDRG3Q9UGV2 375 aa17.64■□□□□ 0.42
SNX27-204ENST00000458013 TNFRSF10CO14798 259 aa17.64■□□□□ 0.41
SNX27-204ENST00000458013 AMTP48728 403 aa17.64■□□□□ 0.41
SNX27-204ENST00000458013 RAE1P78406 368 aaKnown RBP17.64■□□□□ 0.41
SNX27-204ENST00000458013 EXTL1Q92935 676 aa17.64■□□□□ 0.41
SNX27-204ENST00000458013 ABHD14AQ9BUJ0 271 aa17.64■□□□□ 0.41
SNX27-204ENST00000458013 FOXJ3Q9UPW0 622 aa17.64■□□□□ 0.41
SNX27-204ENST00000458013 C19orf57Q0VDD7 668 aa17.64■□□□□ 0.41
SNX27-204ENST00000458013 TCTAP57738 103 aa17.64■□□□□ 0.41
SNX27-204ENST00000458013 TIAL1Q01085 375 aaKnown RBP eCLIP17.64■□□□□ 0.41
SNX27-204ENST00000458013 OR2V1Q8NHB1 315 aa17.64■□□□□ 0.41
SNX27-204ENST00000458013 PHF7Q9BWX1 381 aaPredicted RBP17.64■□□□□ 0.41
SNX27-204ENST00000458013 F5H697 171 aa17.64■□□□□ 0.41
SNX27-204ENST00000458013 NTN1O95631 604 aa17.64■□□□□ 0.41
SNX27-204ENST00000458013 RPL13AP40429 203 aaKnown RBP17.64■□□□□ 0.41
SNX27-204ENST00000458013 MYPOPQ86VE0 399 aaPredicted RBP17.64■□□□□ 0.41
SNX27-204ENST00000458013 OR2I1PQ8NGU4 316 aa17.64■□□□□ 0.41
SNX27-204ENST00000458013 TRAPPC2P0DI81 140 aa17.63■□□□□ 0.41
SNX27-204ENST00000458013 TRAPPC2BP0DI82 140 aa17.63■□□□□ 0.41
SNX27-204ENST00000458013 S100A4P26447 101 aaKnown RBP17.63■□□□□ 0.41
SNX27-204ENST00000458013 C9orf50Q5SZB4 431 aa17.63■□□□□ 0.41
SNX27-204ENST00000458013 GUSBP11Q6P575 273 aa17.63■□□□□ 0.41
SNX27-204ENST00000458013 NHLRC1Q6VVB1 395 aa17.63■□□□□ 0.41
SNX27-204ENST00000458013 SLC25A19Q9HC21 320 aa17.63■□□□□ 0.41
SNX27-204ENST00000458013 PMS2P1A4D2B8 440 aa17.63■□□□□ 0.41
SNX27-204ENST00000458013 TGOLN2O43493 480 aa17.63■□□□□ 0.41
SNX27-204ENST00000458013 PTBP1P26599 531 aaKnown RBP eCLIP17.63■□□□□ 0.413e-8■■■■■ 79.7
SNX27-204ENST00000458013 CSF2RBP32927 897 aa17.63■□□□□ 0.41
SNX27-204ENST00000458013 C3AR1Q16581 482 aa17.63■□□□□ 0.41
SNX27-204ENST00000458013 SIRT5Q9NXA8 310 aa17.63■□□□□ 0.41
SNX27-204ENST00000458013 TMEM196Q5HYL7 178 aa17.63■□□□□ 0.41
SNX27-204ENST00000458013 TMEM37Q8WXS4 190 aa17.63■□□□□ 0.41
SNX27-204ENST00000458013 A0A087WUJ7 227 aa17.63■□□□□ 0.41
SNX27-204ENST00000458013 RER1O15258 196 aa17.63■□□□□ 0.41
SNX27-204ENST00000458013 GALR1P47211 349 aa17.63■□□□□ 0.41
SNX27-204ENST00000458013 C6orf201Q7Z4U5 140 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms