RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 TGIF2Q9GZN2 237 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 FAM206AQ9NX38 181 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 LUZP4Q9P127 313 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 ANAPC10Q9UM13 185 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 MRPS28Q9Y2Q9 187 aaKnown RBP9.11□□□□□ -0.95
CLIP4-208ENST00000456385 COL4A2P08572 1712 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 A0A0J9YY10 115 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 A8MVM7 634 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 ATXN7O15265 892 aaPredicted RBP9.11□□□□□ -0.95
CLIP4-208ENST00000456385 XRCC2O43543 280 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 HIST1H2BKO60814 126 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 HIST1H2BJP06899 126 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 RNH1P13489 461 aaKnown RBP9.11□□□□□ -0.95
CLIP4-208ENST00000456385 HIST1H2BOP23527 126 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 HIST1H2BBP33778 126 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 GJA4P35212 333 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 ASCL1P50553 236 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 SNU13P55769 128 aaKnown RBP9.11□□□□□ -0.95
CLIP4-208ENST00000456385 HIST1H2BDP58876 126 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 HIST1H2BCP62807 126 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 SLC35A1P78382 337 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 ACY1Q03154 408 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 HIST2H2BEQ16778 126 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 SOHLH1Q5JUK2 328 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.11□□□□□ -0.95
CLIP4-208ENST00000456385 CDCP2Q5VXM1 449 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 ARHGEF39Q8N4T4 335 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 AVL9Q8NBF6 648 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 APCDD1LQ8NCL9 501 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 FNDC9Q8TBE3 224 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 OR51E1Q8TCB6 317 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 PHOSPHO2Q8TCD6 241 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 Q8WTZ3 238 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 HIST1H2BHQ93079 126 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 DEFB118Q96PH6 123 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 HIST1H2BNQ99877 126 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 HIST1H2BMQ99879 126 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 TWSG1Q9GZX9 223 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 SMOC1Q9H4F8 434 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 B3GALT5Q9Y2C3 310 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 PCNX3Q9H6A9 2034 aa9.11□□□□□ -0.95
CLIP4-208ENST00000456385 LINC01553A4QN01 128 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 FIGNL2A6NMB9 653 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 H0YIG0 161 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 CRTAPO75718 401 aaPredicted RBP9.1□□□□□ -0.95
CLIP4-208ENST00000456385 DXOO77932 396 aaKnown RBP9.1□□□□□ -0.95
CLIP4-208ENST00000456385 NSA2O95478 260 aaKnown RBP9.1□□□□□ -0.95
CLIP4-208ENST00000456385 CHRM2P08172 466 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 GSTP1P09211 210 aaKnown RBP9.1□□□□□ -0.95
CLIP4-208ENST00000456385 RBMXP38159 391 aaKnown RBP9.1□□□□□ -0.95
CLIP4-208ENST00000456385 ERVFRD-1P60508 538 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 LSM6P62312 80 aaKnown RBP9.1□□□□□ -0.95
CLIP4-208ENST00000456385 RAB1AP62820 205 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 CCL20P78556 96 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 RSU1Q15404 277 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 GGNBP1Q5YKI7 109 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 COMMD1Q8N668 190 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 C19orf47Q8N9M1 422 aaKnown RBP9.1□□□□□ -0.95
CLIP4-208ENST00000456385 MFSD8Q8NHS3 518 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 GPR119Q8TDV5 335 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 TCTN2Q96GX1 697 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 SCGB3A2Q96PL1 93 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 TMEM59Q9BXS4 323 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 PBOV1Q9GZY1 135 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 CUTCQ9NTM9 273 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 C1orf123Q9NWV4 160 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 SRPK3Q9UPE1 567 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 LAMA1P25391 3075 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 TGIF2-C20orf24A0A0A6YYL0 155 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 ZNF726A6NNF4 738 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 C17orf105B2RV13 164 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 PLPP3O14495 311 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 PLRG1O43660 514 aaKnown RBP9.1□□□□□ -0.95
CLIP4-208ENST00000456385 SCGNO76038 276 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 DIRAS3O95661 229 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 IL33O95760 270 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 F10P00742 488 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 MBPP02686 304 aaPredicted RBP9.1□□□□□ -0.95
CLIP4-208ENST00000456385 SEC11BP0C7V7 166 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 SLC2A1P11166 492 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 KLK2P20151 261 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 CRABP1P29762 137 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 DDTP30046 118 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 APOBEC1P41238 236 aaKnown RBP9.1□□□□□ -0.95
CLIP4-208ENST00000456385 MMP16P51512 607 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 ELOBQ15370 118 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 KHDC3LQ587J8 217 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 PLXDC2Q6UX71 529 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 ZNF610Q8N9Z0 462 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 SUMF2Q8NBJ7 301 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 OR5D18Q8NGL1 313 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 FAM213BQ8TBF2 198 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 GALNT14Q96FL9 552 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 NUDT16L1Q9BRJ7 211 aaKnown RBP9.1□□□□□ -0.95
CLIP4-208ENST00000456385 ARV1Q9H2C2 271 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 TUBD1Q9UJT1 453 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 TMEM184BQ9Y519 407 aaPredicted RBP9.1□□□□□ -0.95
CLIP4-208ENST00000456385 HS3ST3B1Q9Y662 390 aa9.1□□□□□ -0.95
CLIP4-208ENST00000456385 IGKV1D-8A0A087WSZ0 117 aa9.09□□□□□ -0.95
CLIP4-208ENST00000456385 CLDN4O14493 209 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms