RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 E5RGE8 158 aa12.12□□□□□ -0.47
PTPRE-204ENST00000455661 YIF1AO95070 293 aa12.12□□□□□ -0.47
PTPRE-204ENST00000455661 NTSR1P30989 418 aa12.12□□□□□ -0.47
PTPRE-204ENST00000455661 PTGER4P35408 488 aa12.12□□□□□ -0.47
PTPRE-204ENST00000455661 KIR2DL1P43626 348 aaPredicted RBP12.12□□□□□ -0.47
PTPRE-204ENST00000455661 ZNF239Q16600 458 aaKnown RBP12.12□□□□□ -0.47
PTPRE-204ENST00000455661 HLA-DQA1Q5Y7H0 255 aa12.12□□□□□ -0.47
PTPRE-204ENST00000455661 LCN10Q6JVE6 187 aa12.12□□□□□ -0.47
PTPRE-204ENST00000455661 HEPN1Q6WQI6 88 aa12.12□□□□□ -0.47
PTPRE-204ENST00000455661 GRINAQ7Z429 371 aa12.12□□□□□ -0.47
PTPRE-204ENST00000455661 LFNGQ8NES3 379 aa12.12□□□□□ -0.47
PTPRE-204ENST00000455661 OR51T1Q8NGJ9 327 aa12.12□□□□□ -0.47
PTPRE-204ENST00000455661 OR51E1Q8TCB6 317 aa12.12□□□□□ -0.47
PTPRE-204ENST00000455661 MAFIPQ8WZ33 124 aa12.12□□□□□ -0.47
PTPRE-204ENST00000455661 OR10A2Q9H208 303 aa12.12□□□□□ -0.47
PTPRE-204ENST00000455661 GAR1Q9NY12 217 aaKnown RBP12.12□□□□□ -0.47
PTPRE-204ENST00000455661 NSG2Q9Y328 171 aa12.12□□□□□ -0.47
PTPRE-204ENST00000455661 FBXO7Q9Y3I1 522 aa12.12□□□□□ -0.47
PTPRE-204ENST00000455661 WISP1O95388 367 aa12.12□□□□□ -0.47
PTPRE-204ENST00000455661 OR13C7P0DN81 318 aa12.12□□□□□ -0.47
PTPRE-204ENST00000455661 GPX4P36969 197 aaPredicted RBP12.12□□□□□ -0.47
PTPRE-204ENST00000455661 TNFRSF4P43489 277 aa12.12□□□□□ -0.47
PTPRE-204ENST00000455661 COL13A1Q5TAT6 717 aaPredicted RBP12.12□□□□□ -0.47
PTPRE-204ENST00000455661 SULF2Q8IWU5 870 aa12.12□□□□□ -0.47
PTPRE-204ENST00000455661 AKR7LQ8NHP1 331 aa12.12□□□□□ -0.47
PTPRE-204ENST00000455661 GINS3Q9BRX5 216 aa12.12□□□□□ -0.47
PTPRE-204ENST00000455661 CFHR5Q9BXR6 569 aa12.12□□□□□ -0.47
PTPRE-204ENST00000455661 SLC2A4RGQ9NR83 387 aa12.12□□□□□ -0.47
PTPRE-204ENST00000455661 UFSP2Q9NUQ7 469 aa12.12□□□□□ -0.47
PTPRE-204ENST00000455661 ARID1BQ8NFD5 2236 aaPredicted RBP12.12□□□□□ -0.47
PTPRE-204ENST00000455661 ATG2BQ96BY7 2078 aa12.12□□□□□ -0.47
PTPRE-204ENST00000455661 LAMA2P24043 3122 aaKnown RBP12.12□□□□□ -0.47
PTPRE-204ENST00000455661 CPAMD8Q8IZJ3 1885 aa12.12□□□□□ -0.47
PTPRE-204ENST00000455661 LINC01553A4QN01 128 aa12.11□□□□□ -0.47
PTPRE-204ENST00000455661 NDUFA6P56556 154 aa12.11□□□□□ -0.47
PTPRE-204ENST00000455661 DCAF7P61962 342 aa12.11□□□□□ -0.47
PTPRE-204ENST00000455661 HHEXQ03014 270 aa12.11□□□□□ -0.47
PTPRE-204ENST00000455661 C14orf28Q4W4Y0 310 aa12.11□□□□□ -0.47
PTPRE-204ENST00000455661 TMEM196Q5HYL7 178 aa12.11□□□□□ -0.47
PTPRE-204ENST00000455661 SOHLH1Q5JUK2 328 aa12.11□□□□□ -0.47
PTPRE-204ENST00000455661 GGNBP1Q5YKI7 109 aa12.11□□□□□ -0.47
PTPRE-204ENST00000455661 RNF144BQ7Z419 303 aa12.11□□□□□ -0.47
PTPRE-204ENST00000455661 ZNF383Q8NA42 475 aa12.11□□□□□ -0.47
PTPRE-204ENST00000455661 SUMF2Q8NBJ7 301 aa12.11□□□□□ -0.47
PTPRE-204ENST00000455661 GPBAR1Q8TDU6 330 aa12.11□□□□□ -0.47
PTPRE-204ENST00000455661 C11orf40Q8WZ69 217 aa12.11□□□□□ -0.47
PTPRE-204ENST00000455661 ERGIC1Q969X5 290 aa12.11□□□□□ -0.47
PTPRE-204ENST00000455661 ADIPOR1Q96A54 375 aa12.11□□□□□ -0.47
PTPRE-204ENST00000455661 C1orf147Q96MC9 270 aaPredicted RBP12.11□□□□□ -0.47
PTPRE-204ENST00000455661 GNRHR2Q96P88 292 aa12.11□□□□□ -0.47
PTPRE-204ENST00000455661 KCNK17Q96T54 332 aa12.11□□□□□ -0.47
PTPRE-204ENST00000455661 MOB1AQ9H8S9 216 aa12.11□□□□□ -0.47
PTPRE-204ENST00000455661 PUS1Q9Y606 427 aaKnown RBP eCLIP12.11□□□□□ -0.47
PTPRE-204ENST00000455661 CDC14CA4D256 554 aa12.11□□□□□ -0.47
PTPRE-204ENST00000455661 ZNF878C9JN71 531 aa12.11□□□□□ -0.47
PTPRE-204ENST00000455661 MS4A18H0YCH9 400 aa12.11□□□□□ -0.47
PTPRE-204ENST00000455661 CCL5P13501 91 aa12.11□□□□□ -0.47
PTPRE-204ENST00000455661 P2RY1P47900 373 aa12.11□□□□□ -0.47
PTPRE-204ENST00000455661 ZNF84P51523 738 aa12.11□□□□□ -0.47
PTPRE-204ENST00000455661 RPS23P62266 143 aaKnown RBP12.11□□□□□ -0.47
PTPRE-204ENST00000455661 YPEL5P62699 121 aa12.11□□□□□ -0.47
PTPRE-204ENST00000455661 HSD11B2P80365 405 aa12.11□□□□□ -0.47
PTPRE-204ENST00000455661 PLCXD2Q0VAA5 305 aa12.11□□□□□ -0.47
PTPRE-204ENST00000455661 ZP4Q12836 540 aa12.11□□□□□ -0.47
PTPRE-204ENST00000455661 MS4A18Q3C1V0 323 aa12.11□□□□□ -0.47
PTPRE-204ENST00000455661 PYY3Q5JQD4 70 aa12.11□□□□□ -0.47
PTPRE-204ENST00000455661 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.11□□□□□ -0.47
PTPRE-204ENST00000455661 ABHD12BQ7Z5M8 362 aaPredicted RBP12.11□□□□□ -0.47
PTPRE-204ENST00000455661 OR5AS1Q8N127 324 aa12.11□□□□□ -0.47
PTPRE-204ENST00000455661 PNLDC1Q8NA58 520 aaKnown RBP12.11□□□□□ -0.47
PTPRE-204ENST00000455661 CHST5Q9GZS9 411 aa12.11□□□□□ -0.47
PTPRE-204ENST00000455661 SMDT1Q9H4I9 107 aa12.11□□□□□ -0.47
PTPRE-204ENST00000455661 FBRSQ9HAH7 460 aa12.11□□□□□ -0.47
PTPRE-204ENST00000455661 PARPBPQ9NWS1 579 aa12.11□□□□□ -0.47
PTPRE-204ENST00000455661 HDGFL3Q9Y3E1 203 aa12.11□□□□□ -0.47
PTPRE-204ENST00000455661 TMEM131Q92545 1883 aa12.11□□□□□ -0.47
PTPRE-204ENST00000455661 IGKV1D-43A0A0B4J1Z2 117 aa12.1□□□□□ -0.47
PTPRE-204ENST00000455661 A0A1W2PP11 408 aa12.1□□□□□ -0.47
PTPRE-204ENST00000455661 TMEM150CB9EJG8 249 aa12.1□□□□□ -0.47
PTPRE-204ENST00000455661 GPR137BO60478 399 aa12.1□□□□□ -0.47
PTPRE-204ENST00000455661 ITGA3P26006 1051 aa12.1□□□□□ -0.47
PTPRE-204ENST00000455661 MNX1P50219 401 aaPredicted RBP12.1□□□□□ -0.47
PTPRE-204ENST00000455661 Q6ZSR6 202 aa12.1□□□□□ -0.47
PTPRE-204ENST00000455661 MFSD8Q8NHS3 518 aa12.1□□□□□ -0.47
PTPRE-204ENST00000455661 GPR119Q8TDV5 335 aa12.1□□□□□ -0.47
PTPRE-204ENST00000455661 SLAMF9Q96A28 289 aa12.1□□□□□ -0.47
PTPRE-204ENST00000455661 PLA2G2FQ9BZM2 168 aa12.1□□□□□ -0.47
PTPRE-204ENST00000455661 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.1□□□□□ -0.47
PTPRE-204ENST00000455661 GFOD1Q9NXC2 390 aa12.1□□□□□ -0.47
PTPRE-204ENST00000455661 A0A1B0GW64 132 aa12.1□□□□□ -0.47
PTPRE-204ENST00000455661 GIMD1P0DJR0 217 aa12.1□□□□□ -0.47
PTPRE-204ENST00000455661 HOXB2P14652 356 aa12.1□□□□□ -0.47
PTPRE-204ENST00000455661 IL11P20809 199 aa12.1□□□□□ -0.47
PTPRE-204ENST00000455661 AKT2P31751 481 aa12.1□□□□□ -0.47
PTPRE-204ENST00000455661 FHITP49789 147 aa12.1□□□□□ -0.47
PTPRE-204ENST00000455661 POU3F1Q03052 451 aaPredicted RBP12.1□□□□□ -0.47
PTPRE-204ENST00000455661 GPR157Q5UAW9 335 aa12.1□□□□□ -0.47
PTPRE-204ENST00000455661 CLEC9AQ6UXN8 241 aa12.1□□□□□ -0.47
PTPRE-204ENST00000455661 MR1Q95460 341 aa12.1□□□□□ -0.47
PTPRE-204ENST00000455661 MRPL24Q96A35 216 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms