RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 BHLHE23Q8NDY6 225 aa11.92□□□□□ -0.5
CLK3-203ENST00000454830 OR5M9Q8NGP3 310 aa11.92□□□□□ -0.5
CLK3-203ENST00000454830 CHST5Q9GZS9 411 aa11.92□□□□□ -0.5
CLK3-203ENST00000454830 LPAR5Q9H1C0 372 aa11.92□□□□□ -0.5
CLK3-203ENST00000454830 RYDENQ9NUL5 291 aaKnown RBP11.92□□□□□ -0.5
CLK3-203ENST00000454830 APC2O95996 2303 aa11.92□□□□□ -0.5
CLK3-203ENST00000454830 TMEM82A0PJX8 343 aa11.92□□□□□ -0.5
CLK3-203ENST00000454830 SULT1C2O00338 296 aa11.92□□□□□ -0.5
CLK3-203ENST00000454830 HRH1P35367 487 aa11.92□□□□□ -0.5
CLK3-203ENST00000454830 ZNF133P52736 654 aaPredicted RBP11.92□□□□□ -0.5
CLK3-203ENST00000454830 ZNF260Q3ZCT1 412 aa11.92□□□□□ -0.5
CLK3-203ENST00000454830 ALKBH2Q6NS38 261 aa11.92□□□□□ -0.5
CLK3-203ENST00000454830 GLDNQ6ZMI3 551 aaPredicted RBP11.92□□□□□ -0.5
CLK3-203ENST00000454830 OR56B1Q8NGI3 324 aa11.92□□□□□ -0.5
CLK3-203ENST00000454830 POFUT1Q9H488 388 aa11.92□□□□□ -0.5
CLK3-203ENST00000454830 PLEKHA6Q9Y2H5 1048 aa11.92□□□□□ -0.5
CLK3-203ENST00000454830 RHBDD3Q9Y3P4 386 aa11.92□□□□□ -0.5
CLK3-203ENST00000454830 CHRM2P08172 466 aa11.91□□□□□ -0.5
CLK3-203ENST00000454830 WT1P19544 449 aaPredicted RBP11.91□□□□□ -0.5
CLK3-203ENST00000454830 VAMP1P23763 118 aa11.91□□□□□ -0.5
CLK3-203ENST00000454830 CTSSP25774 331 aa11.91□□□□□ -0.5
CLK3-203ENST00000454830 CD82P27701 267 aa11.91□□□□□ -0.5
CLK3-203ENST00000454830 SSTR2P30874 369 aa11.91□□□□□ -0.5
CLK3-203ENST00000454830 ZNF92Q03936 586 aa11.91□□□□□ -0.5
CLK3-203ENST00000454830 GLRX5Q86SX6 157 aa11.91□□□□□ -0.5
CLK3-203ENST00000454830 CNEP1R1Q8N9A8 125 aa11.91□□□□□ -0.5
CLK3-203ENST00000454830 CYYR1Q96J86 154 aa11.91□□□□□ -0.5
CLK3-203ENST00000454830 PRSS50Q9UI38 385 aa11.91□□□□□ -0.5
CLK3-203ENST00000454830 SLC7A11Q9UPY5 501 aa11.91□□□□□ -0.5
CLK3-203ENST00000454830 SCGNO76038 276 aa11.91□□□□□ -0.5
CLK3-203ENST00000454830 TGM6O95932 706 aa11.91□□□□□ -0.5
CLK3-203ENST00000454830 NRASP01111 189 aa11.91□□□□□ -0.5
CLK3-203ENST00000454830 CCL1P22362 96 aa11.91□□□□□ -0.5
CLK3-203ENST00000454830 OR3A3P47888 321 aa11.91□□□□□ -0.5
CLK3-203ENST00000454830 OR3A2P47893 321 aa11.91□□□□□ -0.5
CLK3-203ENST00000454830 RAB1AP62820 205 aa11.91□□□□□ -0.5
CLK3-203ENST00000454830 ZFP62Q8NB50 900 aaPredicted RBP11.91□□□□□ -0.5
CLK3-203ENST00000454830 TMEM229BQ8NBD8 167 aa11.91□□□□□ -0.5
CLK3-203ENST00000454830 CASTOR1Q8WTX7 329 aa11.91□□□□□ -0.5
CLK3-203ENST00000454830 ZNF436Q9C0F3 470 aaPredicted RBP11.91□□□□□ -0.5
CLK3-203ENST00000454830 A0A1W2PR80 420 aa11.91□□□□□ -0.5
CLK3-203ENST00000454830 TMEM14DPA8MWL7 114 aa11.91□□□□□ -0.5
CLK3-203ENST00000454830 GOSR2O14653 212 aa11.91□□□□□ -0.5
CLK3-203ENST00000454830 VSIG10L2P0DP72 767 aa11.91□□□□□ -0.5
CLK3-203ENST00000454830 AMY2BP19961 511 aa11.91□□□□□ -0.5
CLK3-203ENST00000454830 CFPP27918 469 aa11.91□□□□□ -0.5
CLK3-203ENST00000454830 TCF15Q12870 199 aa11.91□□□□□ -0.5
CLK3-203ENST00000454830 OR4K15Q8NH41 348 aa11.91□□□□□ -0.5
CLK3-203ENST00000454830 HAS2Q92819 552 aa11.91□□□□□ -0.5
CLK3-203ENST00000454830 PTX4Q96A99 478 aa11.91□□□□□ -0.5
CLK3-203ENST00000454830 PAPOLGQ9BWT3 736 aaKnown RBP11.91□□□□□ -0.5
CLK3-203ENST00000454830 RANBP3Q9H6Z4 567 aaPredicted RBP11.91□□□□□ -0.5
CLK3-203ENST00000454830 KIAA1549Q9HCM3 1950 aa11.9□□□□□ -0.5
CLK3-203ENST00000454830 FAM25EA8MYX2 175 aa11.9□□□□□ -0.5
CLK3-203ENST00000454830 TPPPO94811 219 aa11.9□□□□□ -0.5
CLK3-203ENST00000454830 CRYGSP22914 178 aa11.9□□□□□ -0.5
CLK3-203ENST00000454830 TNFSF10P50591 281 aa11.9□□□□□ -0.5
CLK3-203ENST00000454830 ZNF81P51508 661 aa11.9□□□□□ -0.5
CLK3-203ENST00000454830 HIST1H3AP68431 136 aa11.9□□□□□ -0.5
CLK3-203ENST00000454830 CNN3Q15417 329 aaKnown RBP11.9□□□□□ -0.5
CLK3-203ENST00000454830 HIST2H3PS2Q5TEC6 136 aa11.9□□□□□ -0.5
CLK3-203ENST00000454830 HIST2H3AQ71DI3 136 aa11.9□□□□□ -0.5
CLK3-203ENST00000454830 MRPL21Q7Z2W9 205 aaKnown RBP11.9□□□□□ -0.5
CLK3-203ENST00000454830 CPEB3Q8NE35 698 aaKnown RBP11.9□□□□□ -0.5
CLK3-203ENST00000454830 OR8H1Q8NGG4 311 aa11.9□□□□□ -0.5
CLK3-203ENST00000454830 CCDC107Q8WV48 283 aa11.9□□□□□ -0.5
CLK3-203ENST00000454830 MICU1Q9BPX6 476 aa11.9□□□□□ -0.5
CLK3-203ENST00000454830 ASCL3Q9NQ33 180 aa11.9□□□□□ -0.5
CLK3-203ENST00000454830 PLEKHJ1Q9NW61 149 aa11.9□□□□□ -0.5
CLK3-203ENST00000454830 ZNF230Q9UIE0 474 aaPredicted RBP11.9□□□□□ -0.5
CLK3-203ENST00000454830 KCNK7Q9Y2U2 307 aa11.9□□□□□ -0.5
CLK3-203ENST00000454830 AKR1C4P17516 323 aa11.9□□□□□ -0.5
CLK3-203ENST00000454830 TAF9Q16594 264 aa11.9□□□□□ -0.5
CLK3-203ENST00000454830 HIKESHIQ53FT3 197 aa11.9□□□□□ -0.5
CLK3-203ENST00000454830 ZFAND1Q8TCF1 268 aa11.9□□□□□ -0.5
CLK3-203ENST00000454830 TMEM165Q9HC07 324 aa11.9□□□□□ -0.5
CLK3-203ENST00000454830 NOP16Q9Y3C1 178 aaKnown RBP11.9□□□□□ -0.5
CLK3-203ENST00000454830 PRR33A8MZF0 331 aa11.9□□□□□ -0.51
CLK3-203ENST00000454830 ACTL6AO96019 429 aa11.9□□□□□ -0.51
CLK3-203ENST00000454830 SERPINA5P05154 406 aa11.9□□□□□ -0.51
CLK3-203ENST00000454830 UBBP0CG47 229 aa11.9□□□□□ -0.51
CLK3-203ENST00000454830 HIST1H1DP16402 221 aaKnown RBP11.9□□□□□ -0.51
CLK3-203ENST00000454830 OTX1P32242 354 aaPredicted RBP11.9□□□□□ -0.51
CLK3-203ENST00000454830 GSK3AP49840 483 aa11.9□□□□□ -0.51
CLK3-203ENST00000454830 PDCD1Q15116 288 aa11.9□□□□□ -0.51
CLK3-203ENST00000454830 RNPS1Q15287 305 aaKnown RBP11.9□□□□□ -0.51
CLK3-203ENST00000454830 Q5BKY6 102 aa11.9□□□□□ -0.51
CLK3-203ENST00000454830 LIN54Q6MZP7 749 aa11.9□□□□□ -0.51
CLK3-203ENST00000454830 AQP3Q92482 292 aa11.9□□□□□ -0.51
CLK3-203ENST00000454830 RADILQ96JH8 1075 aa11.9□□□□□ -0.51
CLK3-203ENST00000454830 TRIB1Q96RU8 372 aa11.9□□□□□ -0.51
CLK3-203ENST00000454830 CDRT15L2A8MXV6 281 aa11.89□□□□□ -0.51
CLK3-203ENST00000454830 SULT1A3P0DMM9 295 aa11.89□□□□□ -0.51
CLK3-203ENST00000454830 SULT1A4P0DMN0 295 aa11.89□□□□□ -0.51
CLK3-203ENST00000454830 RBP2P50120 134 aa11.89□□□□□ -0.51
CLK3-203ENST00000454830 NLRC3Q7RTR2 1065 aa11.89□□□□□ -0.51
CLK3-203ENST00000454830 FTMTQ8N4E7 242 aa11.89□□□□□ -0.51
CLK3-203ENST00000454830 CA10Q9NS85 328 aa11.89□□□□□ -0.51
CLK3-203ENST00000454830 LUZP4Q9P127 313 aa11.89□□□□□ -0.51
CLK3-203ENST00000454830 SPRR3Q9UBC9 169 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms