RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 CPT2P23786 658 aa12.07□□□□□ -0.48
COL3A1-203ENST00000450867 CDH15P55291 814 aa12.07□□□□□ -0.48
COL3A1-203ENST00000450867 NANOS3P60323 173 aaKnown RBP12.07□□□□□ -0.48
COL3A1-203ENST00000450867 BTG1P62324 171 aa12.07□□□□□ -0.48
COL3A1-203ENST00000450867 MVKQ03426 396 aa12.07□□□□□ -0.48
COL3A1-203ENST00000450867 ZMYND11Q15326 602 aa12.07□□□□□ -0.48
COL3A1-203ENST00000450867 AVPI1Q5T686 147 aa12.07□□□□□ -0.48
COL3A1-203ENST00000450867 PRAMEF6Q5VXH4 476 aa12.07□□□□□ -0.48
COL3A1-203ENST00000450867 ZNF771Q7L3S4 317 aaPredicted RBP12.07□□□□□ -0.48
COL3A1-203ENST00000450867 C11orf53Q8IXP5 236 aa12.07□□□□□ -0.48
COL3A1-203ENST00000450867 ZDHHC23Q8IYP9 409 aa12.07□□□□□ -0.48
COL3A1-203ENST00000450867 OR11L1Q8NGX0 322 aa12.07□□□□□ -0.48
COL3A1-203ENST00000450867 OR8S1Q8NH09 359 aa12.07□□□□□ -0.48
COL3A1-203ENST00000450867 ZNF420Q8TAQ5 688 aaPredicted RBP12.07□□□□□ -0.48
COL3A1-203ENST00000450867 C10orf35Q96D05 121 aa12.07□□□□□ -0.48
COL3A1-203ENST00000450867 FAM71F1Q96KD3 344 aaPredicted RBP12.07□□□□□ -0.48
COL3A1-203ENST00000450867 C4orf36Q96KX1 117 aa12.07□□□□□ -0.48
COL3A1-203ENST00000450867 MICU1Q9BPX6 476 aa12.07□□□□□ -0.48
COL3A1-203ENST00000450867 RTL8AQ9BWD3 113 aa12.07□□□□□ -0.48
COL3A1-203ENST00000450867 ANKRD60Q9BZ19 345 aa12.07□□□□□ -0.48
COL3A1-203ENST00000450867 FGF23Q9GZV9 251 aaPredicted RBP12.07□□□□□ -0.48
COL3A1-203ENST00000450867 PPP1R3EQ9H7J1 279 aa12.07□□□□□ -0.48
COL3A1-203ENST00000450867 FKBP14Q9NWM8 211 aa12.07□□□□□ -0.48
COL3A1-203ENST00000450867 TMEM160Q9NX00 188 aa12.07□□□□□ -0.48
COL3A1-203ENST00000450867 FRRS1LQ9P0K9 344 aa12.07□□□□□ -0.48
COL3A1-203ENST00000450867 ENPP5Q9UJA9 477 aa12.07□□□□□ -0.48
COL3A1-203ENST00000450867 PIGLQ9Y2B2 252 aa12.07□□□□□ -0.48
COL3A1-203ENST00000450867 CAB39Q9Y376 341 aaPredicted RBP12.07□□□□□ -0.48
COL3A1-203ENST00000450867 ARHGAP32A7KAX9 2087 aa12.06□□□□□ -0.48
COL3A1-203ENST00000450867 LOC107986453A0A1B0GWG9 222 aa12.06□□□□□ -0.48
COL3A1-203ENST00000450867 OR4C45A6NMZ5 311 aa12.06□□□□□ -0.48
COL3A1-203ENST00000450867 ZNF850A8MQ14 1090 aa12.06□□□□□ -0.48
COL3A1-203ENST00000450867 F5H0A9 414 aaPredicted RBP12.06□□□□□ -0.48
COL3A1-203ENST00000450867 J3QLW9 94 aa12.06□□□□□ -0.48
COL3A1-203ENST00000450867 LHBP01229 141 aa12.06□□□□□ -0.48
COL3A1-203ENST00000450867 HTR1AP08908 422 aa12.06□□□□□ -0.48
COL3A1-203ENST00000450867 FAHP16930 419 aa12.06□□□□□ -0.48
COL3A1-203ENST00000450867 ZNF12P17014 697 aa12.06□□□□□ -0.48
COL3A1-203ENST00000450867 ZNF19P17023 458 aa12.06□□□□□ -0.48
COL3A1-203ENST00000450867 MYF6P23409 242 aa12.06□□□□□ -0.48
COL3A1-203ENST00000450867 PSMB10P40306 273 aa12.06□□□□□ -0.48
COL3A1-203ENST00000450867 MDH2P40926 338 aaKnown RBP12.06□□□□□ -0.48
COL3A1-203ENST00000450867 HSPA13P48723 471 aa12.06□□□□□ -0.48
COL3A1-203ENST00000450867 TGM4P49221 684 aa12.06□□□□□ -0.48
COL3A1-203ENST00000450867 ZNF154Q13106 437 aa12.06□□□□□ -0.48
COL3A1-203ENST00000450867 HNRNPA0Q13151 305 aaKnown RBP12.06□□□□□ -0.48
COL3A1-203ENST00000450867 CEACAM21Q3KPI0 293 aa12.06□□□□□ -0.48
COL3A1-203ENST00000450867 TMEM244Q5VVB8 128 aa12.06□□□□□ -0.48
COL3A1-203ENST00000450867 COMMD2Q86X83 199 aa12.06□□□□□ -0.48
COL3A1-203ENST00000450867 MUC20Q8N307 709 aaPredicted RBP12.06□□□□□ -0.48
COL3A1-203ENST00000450867 ZNF485Q8NCK3 441 aa12.06□□□□□ -0.48
COL3A1-203ENST00000450867 OR1M1Q8NGA1 313 aa12.06□□□□□ -0.48
COL3A1-203ENST00000450867 RPS4Y2Q8TD47 263 aa12.06□□□□□ -0.48
COL3A1-203ENST00000450867 GGHQ92820 318 aa12.06□□□□□ -0.48
COL3A1-203ENST00000450867 RAB39BQ96DA2 213 aa12.06□□□□□ -0.48
COL3A1-203ENST00000450867 ZNF665Q9H7R5 613 aa12.06□□□□□ -0.48
COL3A1-203ENST00000450867 ISG20L2Q9H9L3 353 aaKnown RBP12.06□□□□□ -0.48
COL3A1-203ENST00000450867 RNF7Q9UBF6 113 aa12.06□□□□□ -0.48
COL3A1-203ENST00000450867 PSORS1C1Q9UIG5 152 aa12.06□□□□□ -0.48
COL3A1-203ENST00000450867 EXOSC1Q9Y3B2 195 aaKnown RBP12.06□□□□□ -0.48
COL3A1-203ENST00000450867 A0A1B0GVI7 797 aa12.05□□□□□ -0.48
COL3A1-203ENST00000450867 OR5B21A6NL26 309 aa12.05□□□□□ -0.48
COL3A1-203ENST00000450867 FAM157AC9JC47 383 aa12.05□□□□□ -0.48
COL3A1-203ENST00000450867 SYT7O43581 403 aa12.05□□□□□ -0.48
COL3A1-203ENST00000450867 CYB5R3P00387 301 aaPredicted RBP12.05□□□□□ -0.48
COL3A1-203ENST00000450867 RPSAP08865 295 aaKnown RBP12.05□□□□□ -0.48
COL3A1-203ENST00000450867 ZNF16P17020 682 aaPredicted RBP12.05□□□□□ -0.48
COL3A1-203ENST00000450867 THBS2P35442 1172 aa12.05□□□□□ -0.48
COL3A1-203ENST00000450867 ETV1P50549 477 aa12.05□□□□□ -0.48
COL3A1-203ENST00000450867 CSNK2BP67870 215 aa12.05□□□□□ -0.48
COL3A1-203ENST00000450867 ALKBH1Q13686 389 aaKnown RBP12.05□□□□□ -0.48
COL3A1-203ENST00000450867 CCDC58Q4VC31 144 aa12.05□□□□□ -0.48
COL3A1-203ENST00000450867 CLVS2Q5SYC1 327 aa12.05□□□□□ -0.48
COL3A1-203ENST00000450867 IZUMO2Q6UXV1 221 aa12.05□□□□□ -0.48
COL3A1-203ENST00000450867 SPICQ8N5J4 248 aa12.05□□□□□ -0.48
COL3A1-203ENST00000450867 GCSAMQ8N6F7 178 aa12.05□□□□□ -0.48
COL3A1-203ENST00000450867 LINC01356Q8N9X3 169 aa12.05□□□□□ -0.48
COL3A1-203ENST00000450867 OR5A2Q8NGI9 324 aa12.05□□□□□ -0.48
COL3A1-203ENST00000450867 PIGCQ92535 297 aa12.05□□□□□ -0.48
COL3A1-203ENST00000450867 TMEM80Q96HE8 168 aa12.05□□□□□ -0.48
COL3A1-203ENST00000450867 TMEM165Q9HC07 324 aa12.05□□□□□ -0.48
COL3A1-203ENST00000450867 UFSP2Q9NUQ7 469 aa12.05□□□□□ -0.48
COL3A1-203ENST00000450867 RRP15Q9Y3B9 282 aaKnown RBP12.05□□□□□ -0.48
COL3A1-203ENST00000450867 SVEP1Q4LDE5 3571 aa12.04□□□□□ -0.48
COL3A1-203ENST00000450867 IGHV3-64DA0A0J9YX35 117 aa12.04□□□□□ -0.48
COL3A1-203ENST00000450867 B4DSR2 109 aa12.04□□□□□ -0.48
COL3A1-203ENST00000450867 XPNPEP2O43895 674 aa12.04□□□□□ -0.48
COL3A1-203ENST00000450867 IRF2P14316 349 aa12.04□□□□□ -0.48
COL3A1-203ENST00000450867 RBMXP38159 391 aaKnown RBP12.04□□□□□ -0.48
COL3A1-203ENST00000450867 VHLP40337 213 aa12.04□□□□□ -0.48
COL3A1-203ENST00000450867 GNG3P63215 75 aa12.04□□□□□ -0.48
COL3A1-203ENST00000450867 ST3GAL4Q11206 333 aa12.04□□□□□ -0.48
COL3A1-203ENST00000450867 ZNF404Q494X3 552 aa12.04□□□□□ -0.48
COL3A1-203ENST00000450867 C6orf141Q5SZD1 244 aa12.04□□□□□ -0.48
COL3A1-203ENST00000450867 RNLSQ5VYX0 342 aa12.04□□□□□ -0.48
COL3A1-203ENST00000450867 WDR82Q6UXN9 313 aa12.04□□□□□ -0.48
COL3A1-203ENST00000450867 OR10Z1Q8NGY1 313 aa12.04□□□□□ -0.48
COL3A1-203ENST00000450867 OR52N1Q8NH53 320 aa12.04□□□□□ -0.48
COL3A1-203ENST00000450867 GAL3ST1Q99999 423 aa12.04□□□□□ -0.48
COL3A1-203ENST00000450867 CHST5Q9GZS9 411 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms