RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 ZNF718Q3SXZ3 478 aa14.49□□□□□ -0.09
PRPF40A-204ENST00000450303 TMEM255AQ5JRV8 349 aa14.49□□□□□ -0.09
PRPF40A-204ENST00000450303 FAM120AOSQ5T036 256 aa14.49□□□□□ -0.09
PRPF40A-204ENST00000450303 BCL2L15Q5TBC7 163 aa14.49□□□□□ -0.09
PRPF40A-204ENST00000450303 RFPL4BQ6ZWI9 263 aa14.49□□□□□ -0.09
PRPF40A-204ENST00000450303 OR52H1Q8NGJ2 320 aa14.49□□□□□ -0.09
PRPF40A-204ENST00000450303 MCFD2Q8NI22 146 aa14.49□□□□□ -0.09
PRPF40A-204ENST00000450303 ABHD4Q8TB40 342 aa14.49□□□□□ -0.09
PRPF40A-204ENST00000450303 OR5M11Q96RB7 305 aa14.49□□□□□ -0.09
PRPF40A-204ENST00000450303 C1QTNF5Q9BXJ0 243 aa14.49□□□□□ -0.09
PRPF40A-204ENST00000450303 OR2J1Q9GZK6 312 aa14.49□□□□□ -0.09
PRPF40A-204ENST00000450303 TUBG2Q9NRH3 451 aa14.49□□□□□ -0.09
PRPF40A-204ENST00000450303 TBCCD1Q9NVR7 557 aa14.49□□□□□ -0.09
PRPF40A-204ENST00000450303 OR52A1Q9UKL2 312 aa14.49□□□□□ -0.09
PRPF40A-204ENST00000450303 LSM2Q9Y333 95 aaKnown RBP14.49□□□□□ -0.09
PRPF40A-204ENST00000450303 FBN1P35555 2871 aaKnown RBP14.48□□□□□ -0.09
PRPF40A-204ENST00000450303 WNT9BO14905 357 aa14.48□□□□□ -0.09
PRPF40A-204ENST00000450303 TPD52L2O43399 206 aaKnown RBP14.48□□□□□ -0.09
PRPF40A-204ENST00000450303 TBX1O43435 398 aa14.48□□□□□ -0.09
PRPF40A-204ENST00000450303 PPIHO43447 177 aaKnown RBP14.48□□□□□ -0.09
PRPF40A-204ENST00000450303 ZNF12P17014 697 aa14.48□□□□□ -0.09
PRPF40A-204ENST00000450303 ACHEP22303 614 aa14.48□□□□□ -0.09
PRPF40A-204ENST00000450303 PSMA1P25786 263 aaKnown RBP14.48□□□□□ -0.09
PRPF40A-204ENST00000450303 GCH1P30793 250 aa14.48□□□□□ -0.09
PRPF40A-204ENST00000450303 CCR9P51686 369 aa14.48□□□□□ -0.09
PRPF40A-204ENST00000450303 BMXP51813 675 aa14.48□□□□□ -0.09
PRPF40A-204ENST00000450303 MALLQ13021 153 aa14.48□□□□□ -0.09
PRPF40A-204ENST00000450303 ZNF404Q494X3 552 aa14.48□□□□□ -0.09
PRPF40A-204ENST00000450303 FAM57BQ71RH2 274 aa14.48□□□□□ -0.09
PRPF40A-204ENST00000450303 ZNF485Q8NCK3 441 aa14.48□□□□□ -0.09
PRPF40A-204ENST00000450303 OR2G2Q8NGZ5 317 aa14.48□□□□□ -0.09
PRPF40A-204ENST00000450303 MARS2Q96GW9 593 aaKnown RBP14.48□□□□□ -0.09
PRPF40A-204ENST00000450303 CHCHD6Q9BRQ6 235 aa14.48□□□□□ -0.09
PRPF40A-204ENST00000450303 PBOV1Q9GZY1 135 aa14.48□□□□□ -0.09
PRPF40A-204ENST00000450303 COMMD4Q9H0A8 199 aa14.48□□□□□ -0.09
PRPF40A-204ENST00000450303 FAM206AQ9NX38 181 aa14.48□□□□□ -0.09
PRPF40A-204ENST00000450303 LPAR3Q9UBY5 353 aa14.48□□□□□ -0.09
PRPF40A-204ENST00000450303 SSR3Q9UNL2 185 aa14.48□□□□□ -0.09
PRPF40A-204ENST00000450303 ATRQ13535 2644 aa14.47□□□□□ -0.09
PRPF40A-204ENST00000450303 TRBV2A0A0J9YWF9 115 aa14.47□□□□□ -0.09
PRPF40A-204ENST00000450303 OGG1O15527 345 aa14.47□□□□□ -0.09
PRPF40A-204ENST00000450303 XRCC2O43543 280 aa14.47□□□□□ -0.09
PRPF40A-204ENST00000450303 SPRY3O43610 288 aa14.47□□□□□ -0.09
PRPF40A-204ENST00000450303 SRSF10O75494 262 aaKnown RBP14.47□□□□□ -0.09
PRPF40A-204ENST00000450303 IGHV3-13P01766 116 aa14.47□□□□□ -0.09
PRPF40A-204ENST00000450303 SLC2A1P11166 492 aa14.47□□□□□ -0.09
PRPF40A-204ENST00000450303 S100A5P33763 92 aa14.47□□□□□ -0.09
PRPF40A-204ENST00000450303 PPP1CBP62140 327 aa14.47□□□□□ -0.09
PRPF40A-204ENST00000450303 GPR50Q13585 617 aa14.47□□□□□ -0.09
PRPF40A-204ENST00000450303 CR1LQ2VPA4 569 aa14.47□□□□□ -0.09
PRPF40A-204ENST00000450303 COLCA1Q6ZS62 124 aa14.47□□□□□ -0.09
PRPF40A-204ENST00000450303 NAA40Q86UY6 237 aa14.47□□□□□ -0.09
PRPF40A-204ENST00000450303 CATSPERDQ86XM0 798 aa14.47□□□□□ -0.09
PRPF40A-204ENST00000450303 LINC01356Q8N9X3 169 aa14.47□□□□□ -0.09
PRPF40A-204ENST00000450303 OR6Q1Q8NGQ2 317 aa14.47□□□□□ -0.09
PRPF40A-204ENST00000450303 CLDND2Q8NHS1 167 aa14.47□□□□□ -0.09
PRPF40A-204ENST00000450303 KLF14Q8TD94 323 aaPredicted RBP14.47□□□□□ -0.09
PRPF40A-204ENST00000450303 UFD1Q92890 307 aa14.47□□□□□ -0.09
PRPF40A-204ENST00000450303 RPL3LQ92901 407 aaKnown RBP14.47□□□□□ -0.09
PRPF40A-204ENST00000450303 HPS1Q92902 700 aa14.47□□□□□ -0.09
PRPF40A-204ENST00000450303 OPALINQ96PE5 141 aa14.47□□□□□ -0.09
PRPF40A-204ENST00000450303 NUFIP1Q9UHK0 495 aaKnown RBP14.47□□□□□ -0.09
PRPF40A-204ENST00000450303 ZNF391Q9UJN7 358 aa14.47□□□□□ -0.09
PRPF40A-204ENST00000450303 STUB1Q9UNE7 303 aa14.47□□□□□ -0.09
PRPF40A-204ENST00000450303 TMEM212A6NML5 194 aa14.46□□□□□ -0.09
PRPF40A-204ENST00000450303 ICMTO60725 284 aa14.46□□□□□ -0.09
PRPF40A-204ENST00000450303 RP2O75695 350 aa14.46□□□□□ -0.09
PRPF40A-204ENST00000450303 PNPP00491 289 aa14.46□□□□□ -0.09
PRPF40A-204ENST00000450303 CFL1P23528 166 aaKnown RBP14.46□□□□□ -0.09
PRPF40A-204ENST00000450303 ZNF81P51508 661 aa14.46□□□□□ -0.09
PRPF40A-204ENST00000450303 TMEM33P57088 247 aa14.46□□□□□ -0.09
PRPF40A-204ENST00000450303 MFGE8Q08431 387 aaPredicted RBP14.46□□□□□ -0.09
PRPF40A-204ENST00000450303 CDK5R1Q15078 307 aa14.46□□□□□ -0.09
PRPF40A-204ENST00000450303 AVPI1Q5T686 147 aa14.46□□□□□ -0.09
PRPF40A-204ENST00000450303 TMEM244Q5VVB8 128 aa14.46□□□□□ -0.09
PRPF40A-204ENST00000450303 ELMOD2Q8IZ81 293 aa14.46□□□□□ -0.09
PRPF40A-204ENST00000450303 ZNF676Q8N7Q3 588 aa14.46□□□□□ -0.09
PRPF40A-204ENST00000450303 OR5AK2Q8NH90 309 aa14.46□□□□□ -0.09
PRPF40A-204ENST00000450303 OR51E2Q9H255 320 aa14.46□□□□□ -0.09
PRPF40A-204ENST00000450303 POFUT1Q9H488 388 aa14.46□□□□□ -0.09
PRPF40A-204ENST00000450303 RGCCQ9H4X1 137 aa14.46□□□□□ -0.09
PRPF40A-204ENST00000450303 OPA3Q9H6K4 179 aa14.46□□□□□ -0.09
PRPF40A-204ENST00000450303 EXOSC4Q9NPD3 245 aaKnown RBP14.46□□□□□ -0.09
PRPF40A-204ENST00000450303 G6PC2Q9NQR9 355 aa14.46□□□□□ -0.09
PRPF40A-204ENST00000450303 DECR2Q9NUI1 292 aa14.46□□□□□ -0.09
PRPF40A-204ENST00000450303 TREM2Q9NZC2 230 aa14.46□□□□□ -0.09
PRPF40A-204ENST00000450303 CACNG2Q9Y698 323 aa14.46□□□□□ -0.09
PRPF40A-204ENST00000450303 CUBNO60494 3623 aa14.46□□□□□ -0.09
PRPF40A-204ENST00000450303 A0A0U1RQV5 110 aa14.45□□□□□ -0.1
PRPF40A-204ENST00000450303 RNF212BA8MTL3 300 aa14.45□□□□□ -0.1
PRPF40A-204ENST00000450303 COL6A5A8TX70 2615 aa14.45□□□□□ -0.1
PRPF40A-204ENST00000450303 E9PI62 339 aa14.45□□□□□ -0.1
PRPF40A-204ENST00000450303 IGHV1-46P01743 117 aa14.45□□□□□ -0.1
PRPF40A-204ENST00000450303 CD1AP06126 327 aa14.45□□□□□ -0.1
PRPF40A-204ENST00000450303 UBCP0CG48 685 aaKnown RBP14.45□□□□□ -0.1
PRPF40A-204ENST00000450303 SRD5A1P18405 259 aa14.45□□□□□ -0.1
PRPF40A-204ENST00000450303 CELP19835 753 aa14.45□□□□□ -0.1
PRPF40A-204ENST00000450303 MMP15P51511 669 aa14.45□□□□□ -0.1
PRPF40A-204ENST00000450303 PCGF3Q3KNV8 242 aa14.45□□□□□ -0.1
PRPF40A-204ENST00000450303 WDR38Q5JTN6 314 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms