RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-238	ENST00000449544	PPIAL4C	A0A0B4J2A2	164 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	TRIM64B	A6NI03	449 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	TMEM229A	B2RXF0	380 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	ACOT8	O14734	319 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	LY6H	O94772	140 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	TK1	P04183	234 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	PPIAL4G	P0DN37	164 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	RPL11	P62913	178 aa	Known RBP	7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	ZNF92	Q03936	586 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	RAB40B	Q12829	278 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	TATDN3	Q17R31	274 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	CMTM1	Q8IZ96	169 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	LINC01356	Q8N9X3	169 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	RFESD	Q8TAC1	157 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	CNIH3	Q8TBE1	160 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	LRRC20	Q8TCA0	184 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	MUL1	Q969V5	352 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	SPACA5	Q96QH8	159 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	NIPSNAP1	Q9BPW8	284 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	NUDT16L1	Q9BRJ7	211 aa	Known RBP	7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	SSBP3	Q9BWW4	388 aa	Predicted RBP	7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	TMEM59	Q9BXS4	323 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	BPESC1	Q9GZL8	116 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	NYNRIN	Q9P2P1	1898 aa	Known RBP	7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	SMIM30	A4D0T7	59 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	DPRX	A6NFQ7	191 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	TRAF3IP2	O43734	574 aa	Predicted RBP	7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	XPNPEP2	O43895	674 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	AIRE	O43918	545 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	TBX6	O95947	436 aa	Predicted RBP	7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	CYB5R3	P00387	301 aa	Predicted RBP	7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	RPS16	P62249	146 aa	Known RBP	7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	SLC35B1	P78383	322 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	PCK2	Q16822	640 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	TRIM16L	Q309B1	348 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	SCGB2B2	Q4G0G5	96 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	CENPV	Q7Z7K6	275 aa	Predicted RBP	7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	OR2AK2	Q8NG84	335 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	TFAP2C	Q92754	450 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	HRASLS	Q9HDD0	168 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544		A0A1B0GVC2	190 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	TCF21	O43680	179 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	ATG12	O94817	140 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	YIF1A	O95070	293 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	ARSB	P15848	533 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	CPT2	P23786	658 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	BLVRB	P30043	206 aa	Predicted RBP	7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	FXYD4	P59646	89 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	PSMA6	P60900	246 aa	Known RBP	7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	ZP4	Q12836	540 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	CDK10	Q15131	360 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	NRN1L	Q496H8	165 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	C6orf183	Q5T699	404 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	AP1AR	Q63HQ0	302 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	CCDC144NL	Q6NUI1	221 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	RPL22L1	Q6P5R6	122 aa	Known RBP	7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	OR4C13	Q8NGP0	309 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	BORCS5	Q969J3	196 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	ARL11	Q969Q4	196 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	COX4I2	Q96KJ9	171 aa		7.33	□□□□□ -1.24
HCG18-238	ENST00000449544	FAM25E	A8MYX2	175 aa		7.32	□□□□□ -1.24
HCG18-238	ENST00000449544	CDKN2A	P42771	156 aa	Known RBP	7.32	□□□□□ -1.24
HCG18-238	ENST00000449544	ALKBH1	Q13686	389 aa	Known RBP	7.32	□□□□□ -1.24
HCG18-238	ENST00000449544	E2F2	Q14209	437 aa		7.32	□□□□□ -1.24
HCG18-238	ENST00000449544	SIAH3	Q8IW03	269 aa		7.32	□□□□□ -1.24
HCG18-238	ENST00000449544	OR8G5	Q8NG78	346 aa		7.32	□□□□□ -1.24
HCG18-238	ENST00000449544	OR51A2	Q8NGJ7	313 aa		7.32	□□□□□ -1.24
HCG18-238	ENST00000449544	NEUROG1	Q92886	237 aa		7.32	□□□□□ -1.24
HCG18-238	ENST00000449544	TOMM40L	Q969M1	308 aa		7.32	□□□□□ -1.24
HCG18-238	ENST00000449544	JAM3	Q9BX67	310 aa		7.32	□□□□□ -1.24
HCG18-238	ENST00000449544	PPP1R14D	Q9NXH3	145 aa		7.32	□□□□□ -1.24
HCG18-238	ENST00000449544	BABAM2	Q9NXR7	383 aa		7.32	□□□□□ -1.24
HCG18-238	ENST00000449544	C14orf166	Q9Y224	244 aa	Known RBP	7.32	□□□□□ -1.24
HCG18-238	ENST00000449544	ZNF281	Q9Y2X9	895 aa		7.32	□□□□□ -1.24
HCG18-238	ENST00000449544	GMDS	O60547	372 aa		7.32	□□□□□ -1.24
HCG18-238	ENST00000449544	CTAG2	O75638	210 aa		7.32	□□□□□ -1.24
HCG18-238	ENST00000449544	GNG10	P50151	68 aa		7.32	□□□□□ -1.24
HCG18-238	ENST00000449544	RAB13	P51153	203 aa		7.32	□□□□□ -1.24
HCG18-238	ENST00000449544	HCCS	P53701	268 aa		7.32	□□□□□ -1.24
HCG18-238	ENST00000449544	ARTN	Q5T4W7	220 aa		7.32	□□□□□ -1.24
HCG18-238	ENST00000449544	C6orf89	Q6UWU4	347 aa		7.32	□□□□□ -1.24
HCG18-238	ENST00000449544	SSX6	Q7RTT6	188 aa		7.32	□□□□□ -1.24
HCG18-238	ENST00000449544	OR10K1	Q8NGX5	313 aa		7.32	□□□□□ -1.24
HCG18-238	ENST00000449544	PP6455	Q8WZ26	134 aa		7.32	□□□□□ -1.24
HCG18-238	ENST00000449544	LHX4	Q969G2	390 aa		7.32	□□□□□ -1.24
HCG18-238	ENST00000449544	SLAMF9	Q96A28	289 aa		7.32	□□□□□ -1.24
HCG18-238	ENST00000449544	FCRL1	Q96LA6	429 aa		7.32	□□□□□ -1.24
HCG18-238	ENST00000449544	MUS81	Q96NY9	551 aa		7.32	□□□□□ -1.24
HCG18-238	ENST00000449544	SORCS2	Q96PQ0	1159 aa		7.32	□□□□□ -1.24
HCG18-238	ENST00000449544	GNB4	Q9HAV0	340 aa		7.32	□□□□□ -1.24
HCG18-238	ENST00000449544	OR2S2	Q9NQN1	319 aa		7.32	□□□□□ -1.24
HCG18-238	ENST00000449544	LAMA3	Q16787	3333 aa		7.32	□□□□□ -1.24
HCG18-238	ENST00000449544	TOX4	O94842	621 aa		7.32	□□□□□ -1.24
HCG18-238	ENST00000449544	HPR	P00739	348 aa		7.32	□□□□□ -1.24
HCG18-238	ENST00000449544	KNG1	P01042	644 aa		7.32	□□□□□ -1.24
HCG18-238	ENST00000449544	LIPF	P07098	398 aa		7.32	□□□□□ -1.24
HCG18-238	ENST00000449544	UCHL1	P09936	223 aa		7.32	□□□□□ -1.24
HCG18-238	ENST00000449544	SNCA	P37840	140 aa		7.32	□□□□□ -1.24
HCG18-238	ENST00000449544	UNQ9370/PRO34162	Q6UXP9	181 aa		7.32	□□□□□ -1.24
HCG18-238	ENST00000449544	FAM58A	Q8N1B3	248 aa		7.32	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms