RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 FBXW12Q6X9E4 464 aa8.35□□□□□ -1.07
RFC4-210ENST00000449502 CMTM4Q8IZR5 234 aa8.35□□□□□ -1.07
RFC4-210ENST00000449502 DTX3Q8N9I9 347 aa8.35□□□□□ -1.07
RFC4-210ENST00000449502 OR4D6Q8NGJ1 314 aa8.35□□□□□ -1.07
RFC4-210ENST00000449502 OR8S1Q8NH09 359 aa8.35□□□□□ -1.07
RFC4-210ENST00000449502 KCNG3Q8TAE7 436 aa8.35□□□□□ -1.07
RFC4-210ENST00000449502 CA5BP1Q8WTZ4 195 aa8.35□□□□□ -1.07
RFC4-210ENST00000449502 FAM46BQ96A09 425 aa8.35□□□□□ -1.07
RFC4-210ENST00000449502 RFT1Q96AA3 541 aa8.35□□□□□ -1.07
RFC4-210ENST00000449502 HAVCR1Q96D42 359 aa8.35□□□□□ -1.07
RFC4-210ENST00000449502 ZC3HAV1LQ96H79 300 aaKnown RBP8.35□□□□□ -1.07
RFC4-210ENST00000449502 RADILQ96JH8 1075 aa8.35□□□□□ -1.07
RFC4-210ENST00000449502 SPACA5Q96QH8 159 aa8.35□□□□□ -1.07
RFC4-210ENST00000449502 MICU1Q9BPX6 476 aa8.35□□□□□ -1.07
RFC4-210ENST00000449502 URM1Q9BTM9 101 aaKnown RBP8.35□□□□□ -1.07
RFC4-210ENST00000449502 OR2J1Q9GZK6 312 aa8.35□□□□□ -1.07
RFC4-210ENST00000449502 SRRQ9GZT4 340 aa8.35□□□□□ -1.07
RFC4-210ENST00000449502 CST11Q9H112 138 aa8.35□□□□□ -1.07
RFC4-210ENST00000449502 METTL9Q9H1A3 318 aa8.35□□□□□ -1.07
RFC4-210ENST00000449502 ABCG5Q9H222 651 aa8.35□□□□□ -1.07
RFC4-210ENST00000449502 KCNJ16Q9NPI9 418 aa8.35□□□□□ -1.07
RFC4-210ENST00000449502 NKIRAS2Q9NYR9 191 aa8.35□□□□□ -1.07
RFC4-210ENST00000449502 JKAMPQ9P055 326 aa8.35□□□□□ -1.07
RFC4-210ENST00000449502 MYEF2Q9P2K5 600 aaKnown RBP8.35□□□□□ -1.07
RFC4-210ENST00000449502 NDRG3Q9UGV2 375 aa8.35□□□□□ -1.07
RFC4-210ENST00000449502 MPC1Q9Y5U8 109 aa8.35□□□□□ -1.07
RFC4-210ENST00000449502 V9GYH0 126 aa8.35□□□□□ -1.07
RFC4-210ENST00000449502 ALPK2Q86TB3 2170 aa8.34□□□□□ -1.07
RFC4-210ENST00000449502 AKAP13Q12802 2813 aa8.34□□□□□ -1.07
RFC4-210ENST00000449502 TIMM8AO60220 97 aaPredicted RBP8.34□□□□□ -1.07
RFC4-210ENST00000449502 CRTAPO75718 401 aaPredicted RBP8.34□□□□□ -1.07
RFC4-210ENST00000449502 PLATP00750 562 aa8.34□□□□□ -1.07
RFC4-210ENST00000449502 CSTBP04080 98 aaKnown RBP8.34□□□□□ -1.07
RFC4-210ENST00000449502 MNDAP41218 407 aa8.34□□□□□ -1.07
RFC4-210ENST00000449502 OR3A4PP47883 348 aa8.34□□□□□ -1.07
RFC4-210ENST00000449502 SCN1BQ07699 218 aa8.34□□□□□ -1.07
RFC4-210ENST00000449502 MZT1Q08AG7 82 aa8.34□□□□□ -1.07
RFC4-210ENST00000449502 RSU1Q15404 277 aa8.34□□□□□ -1.07
RFC4-210ENST00000449502 CEACAM21Q3KPI0 293 aa8.34□□□□□ -1.07
RFC4-210ENST00000449502 TMEM42Q69YG0 159 aa8.34□□□□□ -1.07
RFC4-210ENST00000449502 RAB12Q6IQ22 244 aa8.34□□□□□ -1.07
RFC4-210ENST00000449502 FAM166AQ6J272 317 aa8.34□□□□□ -1.07
RFC4-210ENST00000449502 PCSK4Q6UW60 755 aa8.34□□□□□ -1.07
RFC4-210ENST00000449502 OR2W3Q7Z3T1 314 aa8.34□□□□□ -1.07
RFC4-210ENST00000449502 MYPOPQ86VE0 399 aaPredicted RBP8.34□□□□□ -1.07
RFC4-210ENST00000449502 SNX29P2Q8IUI4 249 aa8.34□□□□□ -1.07
RFC4-210ENST00000449502 IZUMO1Q8IYV9 350 aa8.34□□□□□ -1.07
RFC4-210ENST00000449502 Q8N402 240 aa8.34□□□□□ -1.07
RFC4-210ENST00000449502 GALNT11Q8NCW6 608 aa8.34□□□□□ -1.07
RFC4-210ENST00000449502 BHLHE23Q8NDY6 225 aa8.34□□□□□ -1.07
RFC4-210ENST00000449502 OR5A2Q8NGI9 324 aa8.34□□□□□ -1.07
RFC4-210ENST00000449502 OR5D18Q8NGL1 313 aa8.34□□□□□ -1.07
RFC4-210ENST00000449502 RNASE6Q93091 150 aaKnown RBP8.34□□□□□ -1.07
RFC4-210ENST00000449502 SLC25A28Q96A46 364 aa8.34□□□□□ -1.07
RFC4-210ENST00000449502 PTX4Q96A99 478 aa8.34□□□□□ -1.07
RFC4-210ENST00000449502 RNF170Q96K19 258 aa8.34□□□□□ -1.07
RFC4-210ENST00000449502 CNTNAP3BQ96NU0 1288 aa8.34□□□□□ -1.07
RFC4-210ENST00000449502 NKX3-1Q99801 234 aaPredicted RBP8.34□□□□□ -1.07
RFC4-210ENST00000449502 GAL3ST1Q99999 423 aa8.34□□□□□ -1.07
RFC4-210ENST00000449502 RTL8AQ9BWD3 113 aa8.34□□□□□ -1.07
RFC4-210ENST00000449502 CNTNAP3Q9BZ76 1288 aa8.34□□□□□ -1.07
RFC4-210ENST00000449502 POFUT1Q9H488 388 aa8.34□□□□□ -1.07
RFC4-210ENST00000449502 TMEM100Q9NV29 134 aa8.34□□□□□ -1.07
RFC4-210ENST00000449502 MRPL15Q9P015 296 aaKnown RBP8.34□□□□□ -1.07
RFC4-210ENST00000449502 GPR160Q9UJ42 338 aa8.34□□□□□ -1.07
RFC4-210ENST00000449502 ZNF407Q9C0G0 2248 aa8.33□□□□□ -1.08
RFC4-210ENST00000449502 A0A0A6YYH2 397 aa8.33□□□□□ -1.08
RFC4-210ENST00000449502 A0A0G2JMP0 313 aa8.33□□□□□ -1.08
RFC4-210ENST00000449502 A0A0X1KG70 313 aa8.33□□□□□ -1.08
RFC4-210ENST00000449502 A6NJ64 397 aa8.33□□□□□ -1.08
RFC4-210ENST00000449502 ZNF732B4DXR9 585 aa8.33□□□□□ -1.08
RFC4-210ENST00000449502 ATXN7O15265 892 aaPredicted RBP8.33□□□□□ -1.08
RFC4-210ENST00000449502 XRCC3O43542 346 aa8.33□□□□□ -1.08
RFC4-210ENST00000449502 ICMTO60725 284 aa8.33□□□□□ -1.08
RFC4-210ENST00000449502 ZNF780AO75290 641 aaPredicted RBP8.33□□□□□ -1.08
RFC4-210ENST00000449502 CTAG2O75638 210 aa8.33□□□□□ -1.08
RFC4-210ENST00000449502 TPPPO94811 219 aa8.33□□□□□ -1.08
RFC4-210ENST00000449502 MPIG6BO95866 241 aa8.33□□□□□ -1.08
RFC4-210ENST00000449502 CD37P11049 281 aa8.33□□□□□ -1.08
RFC4-210ENST00000449502 CDK2P24941 298 aa8.33□□□□□ -1.08
RFC4-210ENST00000449502 PTAFRP25105 342 aa8.33□□□□□ -1.08
RFC4-210ENST00000449502 CD40P25942 277 aa8.33□□□□□ -1.08
RFC4-210ENST00000449502 FABP6P51161 128 aa8.33□□□□□ -1.08
RFC4-210ENST00000449502 MRPS10P82664 201 aaKnown RBP8.33□□□□□ -1.08
RFC4-210ENST00000449502 SNTB2Q13425 540 aaKnown RBP8.33□□□□□ -1.08
RFC4-210ENST00000449502 TNK1Q13470 666 aa8.33□□□□□ -1.08
RFC4-210ENST00000449502 SLC22A6Q4U2R8 563 aa8.33□□□□□ -1.08
RFC4-210ENST00000449502 DMRTC1Q5HYR2 192 aa8.33□□□□□ -1.08
RFC4-210ENST00000449502 ZNF57Q68EA5 555 aaPredicted RBP8.33□□□□□ -1.08
RFC4-210ENST00000449502 VHLLQ6RSH7 139 aa8.33□□□□□ -1.08
RFC4-210ENST00000449502 PIAS4Q8N2W9 510 aaPredicted RBP8.33□□□□□ -1.08
RFC4-210ENST00000449502 POC5Q8NA72 575 aa8.33□□□□□ -1.08
RFC4-210ENST00000449502 CHST4Q8NCG5 386 aa8.33□□□□□ -1.08
RFC4-210ENST00000449502 OR4M2Q8NGB6 313 aa8.33□□□□□ -1.08
RFC4-210ENST00000449502 LILRB4Q8NHJ6 448 aa8.33□□□□□ -1.08
RFC4-210ENST00000449502 KLF14Q8TD94 323 aaPredicted RBP8.33□□□□□ -1.08
RFC4-210ENST00000449502 UBASH3BQ8TF42 649 aa8.33□□□□□ -1.08
RFC4-210ENST00000449502 SLC25A38Q96DW6 304 aa8.33□□□□□ -1.08
RFC4-210ENST00000449502 SOSTQ9BQB4 213 aa8.33□□□□□ -1.08
RFC4-210ENST00000449502 TMEM59Q9BXS4 323 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms