RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 SCAND1P57086 179 aa12.97□□□□□ -0.33
SF1-211ENST00000448404 CARD18P57730 90 aa12.97□□□□□ -0.33
SF1-211ENST00000448404 DHRS13Q6UX07 377 aa12.97□□□□□ -0.33
SF1-211ENST00000448404 GGNQ86UU5 652 aa12.97□□□□□ -0.33
SF1-211ENST00000448404 SPICQ8N5J4 248 aa12.97□□□□□ -0.33
SF1-211ENST00000448404 TMEM229BQ8NBD8 167 aa12.97□□□□□ -0.33
SF1-211ENST00000448404 OR10D3Q8NH80 312 aa12.97□□□□□ -0.33
SF1-211ENST00000448404 COQ8AQ8NI60 647 aa12.97□□□□□ -0.33
SF1-211ENST00000448404 C15orf40Q8WUR7 153 aa12.97□□□□□ -0.33
SF1-211ENST00000448404 PSMF1Q92530 271 aa12.97□□□□□ -0.33
SF1-211ENST00000448404 UTP23Q9BRU9 249 aaKnown RBP12.97□□□□□ -0.33
SF1-211ENST00000448404 NELFAQ9H3P2 528 aa12.97□□□□□ -0.33
SF1-211ENST00000448404 TMEM14DPA8MWL7 114 aa12.97□□□□□ -0.33
SF1-211ENST00000448404 OR2A4O95047 310 aa12.97□□□□□ -0.33
SF1-211ENST00000448404 SPDEFO95238 335 aa12.97□□□□□ -0.33
SF1-211ENST00000448404 ZP3P21754 424 aa12.97□□□□□ -0.33
SF1-211ENST00000448404 ADH6P28332 368 aa12.97□□□□□ -0.33
SF1-211ENST00000448404 B2MP61769 119 aa12.97□□□□□ -0.33
SF1-211ENST00000448404 GK2Q14410 553 aaPredicted RBP12.97□□□□□ -0.33
SF1-211ENST00000448404 KISS1Q15726 138 aa12.97□□□□□ -0.33
SF1-211ENST00000448404 MICBQ29980 383 aa12.97□□□□□ -0.33
SF1-211ENST00000448404 VASH2Q86V25 355 aa12.97□□□□□ -0.33
SF1-211ENST00000448404 STPG2Q8N412 459 aa12.97□□□□□ -0.33
SF1-211ENST00000448404 CXorf58Q96LI9 332 aa12.97□□□□□ -0.33
SF1-211ENST00000448404 OR2A7Q96R45 310 aa12.97□□□□□ -0.33
SF1-211ENST00000448404 SHARPINQ9H0F6 387 aa12.97□□□□□ -0.33
SF1-211ENST00000448404 SAV1Q9H4B6 383 aaPredicted RBP12.97□□□□□ -0.33
SF1-211ENST00000448404 SLC17A5Q9NRA2 495 aa12.97□□□□□ -0.33
SF1-211ENST00000448404 IL17BQ9UHF5 180 aa12.97□□□□□ -0.33
SF1-211ENST00000448404 CEP250Q9BV73 2442 aa12.96□□□□□ -0.33
SF1-211ENST00000448404 FAM221AA4D161 298 aa12.96□□□□□ -0.33
SF1-211ENST00000448404 SNRPGP15A8MWD9 76 aa12.96□□□□□ -0.33
SF1-211ENST00000448404 M0R135 149 aa12.96□□□□□ -0.33
SF1-211ENST00000448404 TLX3O43711 291 aaPredicted RBP12.96□□□□□ -0.33
SF1-211ENST00000448404 CBR3O75828 277 aa12.96□□□□□ -0.33
SF1-211ENST00000448404 CD37P11049 281 aa12.96□□□□□ -0.33
SF1-211ENST00000448404 PEAR1Q5VY43 1037 aaPredicted RBP12.96□□□□□ -0.33
SF1-211ENST00000448404 ZNF529Q6P280 563 aa12.96□□□□□ -0.33
SF1-211ENST00000448404 C12orf45Q8N5I9 185 aaPredicted RBP12.96□□□□□ -0.33
SF1-211ENST00000448404 RELL2Q8NC24 303 aaPredicted RBP12.96□□□□□ -0.33
SF1-211ENST00000448404 THRSPQ92748 146 aa12.96□□□□□ -0.33
SF1-211ENST00000448404 RAB3CQ96E17 227 aa12.96□□□□□ -0.33
SF1-211ENST00000448404 WBP1Q96G27 269 aa12.96□□□□□ -0.33
SF1-211ENST00000448404 ZNF799Q96GE5 643 aa12.96□□□□□ -0.33
SF1-211ENST00000448404 TMEM59Q9BXS4 323 aa12.96□□□□□ -0.33
SF1-211ENST00000448404 IGKV1D-8A0A087WSZ0 117 aa12.96□□□□□ -0.34
SF1-211ENST00000448404 A0A096LPE4 126 aa12.96□□□□□ -0.34
SF1-211ENST00000448404 TRAV14DV4A0A0A6YYC5 116 aa12.96□□□□□ -0.34
SF1-211ENST00000448404 FAM230AA0A1W2PPH8 454 aa12.96□□□□□ -0.34
SF1-211ENST00000448404 A0A1W2PPZ6 126 aa12.96□□□□□ -0.34
SF1-211ENST00000448404 TTLL8A6PVC2 850 aa12.96□□□□□ -0.34
SF1-211ENST00000448404 GABRR1P24046 479 aa12.96□□□□□ -0.34
SF1-211ENST00000448404 SEC61A1P61619 476 aaKnown RBP12.96□□□□□ -0.34
SF1-211ENST00000448404 RAC1P63000 192 aa12.96□□□□□ -0.34
SF1-211ENST00000448404 NKAPLQ5M9Q1 402 aa12.96□□□□□ -0.34
SF1-211ENST00000448404 FAM74A1Q5RGS3 127 aa12.96□□□□□ -0.34
SF1-211ENST00000448404 C6orf15Q6UXA7 325 aaPredicted RBP12.96□□□□□ -0.34
SF1-211ENST00000448404 C5orf24Q7Z6I8 188 aa12.96□□□□□ -0.34
SF1-211ENST00000448404 BHLHE23Q8NDY6 225 aa12.96□□□□□ -0.34
SF1-211ENST00000448404 REG4Q9BYZ8 158 aa12.96□□□□□ -0.34
SF1-211ENST00000448404 FLVCR1Q9Y5Y0 555 aa12.96□□□□□ -0.34
SF1-211ENST00000448404 MPTX1A8MV57 137 aa12.95□□□□□ -0.34
SF1-211ENST00000448404 EEF1E1-BLOC1S5C9J1V9 151 aa12.95□□□□□ -0.34
SF1-211ENST00000448404 ERCC1P07992 297 aaPredicted RBP12.95□□□□□ -0.34
SF1-211ENST00000448404 ZNF32P17041 273 aa12.95□□□□□ -0.34
SF1-211ENST00000448404 IGFBP7Q16270 282 aa12.95□□□□□ -0.34
SF1-211ENST00000448404 C6orf201Q7Z4U5 140 aa12.95□□□□□ -0.34
SF1-211ENST00000448404 ADPRHL1Q8NDY3 354 aa12.95□□□□□ -0.34
SF1-211ENST00000448404 OR51T1Q8NGJ9 327 aa12.95□□□□□ -0.34
SF1-211ENST00000448404 PNPLA2Q96AD5 504 aa12.95□□□□□ -0.34
SF1-211ENST00000448404 WDR13Q9H1Z4 485 aa12.95□□□□□ -0.34
SF1-211ENST00000448404 ZMAT5Q9UDW3 170 aaKnown RBP12.95□□□□□ -0.34
SF1-211ENST00000448404 FOXD3Q9UJU5 478 aaPredicted RBP12.95□□□□□ -0.34
SF1-211ENST00000448404 ZFHX2Q9C0A1 2572 aaPredicted RBP12.95□□□□□ -0.34
SF1-211ENST00000448404 BPNT1O95861 308 aa12.95□□□□□ -0.34
SF1-211ENST00000448404 CCNOP22674 350 aa12.95□□□□□ -0.34
SF1-211ENST00000448404 MECP2P51608 486 aaKnown RBP12.95□□□□□ -0.34
SF1-211ENST00000448404 RAP2BP61225 183 aa12.95□□□□□ -0.34
SF1-211ENST00000448404 ARFRP1Q13795 201 aa12.95□□□□□ -0.34
SF1-211ENST00000448404 HLXQ14774 488 aaPredicted RBP12.95□□□□□ -0.34
SF1-211ENST00000448404 TGIF1Q15583 401 aa12.95□□□□□ -0.34
SF1-211ENST00000448404 BOLLQ8N9W6 283 aaKnown RBP12.95□□□□□ -0.34
SF1-211ENST00000448404 TMEM54Q969K7 222 aa12.95□□□□□ -0.34
SF1-211ENST00000448404 SGK3Q96BR1 496 aa12.95□□□□□ -0.34
SF1-211ENST00000448404 PIGQQ9BRB3 760 aa12.95□□□□□ -0.34
SF1-211ENST00000448404 LRFN1Q9P244 771 aa12.95□□□□□ -0.34
SF1-211ENST00000448404 CASRP41180 1078 aa12.94□□□□□ -0.34
SF1-211ENST00000448404 CEACAM16Q2WEN9 425 aa12.94□□□□□ -0.34
SF1-211ENST00000448404 TMUB2Q71RG4 321 aa12.94□□□□□ -0.34
SF1-211ENST00000448404 DTWD2Q8NBA8 298 aa12.94□□□□□ -0.34
SF1-211ENST00000448404 GJC3Q8NFK1 279 aa12.94□□□□□ -0.34
SF1-211ENST00000448404 OR4K15Q8NH41 348 aa12.94□□□□□ -0.34
SF1-211ENST00000448404 SHANK1Q9Y566 2161 aa12.94□□□□□ -0.34
SF1-211ENST00000448404 C13orf42A0A1B0GVH6 325 aa12.94□□□□□ -0.34
SF1-211ENST00000448404 MFSD2BA6NFX1 497 aa12.94□□□□□ -0.34
SF1-211ENST00000448404 LCATP04180 440 aa12.94□□□□□ -0.34
SF1-211ENST00000448404 DLSTP36957 453 aa12.94□□□□□ -0.34
SF1-211ENST00000448404 CAPZA1P52907 286 aa12.94□□□□□ -0.34
SF1-211ENST00000448404 SLC9A3R2Q15599 337 aa12.94□□□□□ -0.34
SF1-211ENST00000448404 PDCD10Q9BUL8 212 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms