RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 GABRA3P34903 492 aa7.67□□□□□ -1.18
MCF2L2-203ENST00000447025 PBX2P40425 430 aa7.67□□□□□ -1.18
MCF2L2-203ENST00000447025 FOXA1P55317 472 aa7.67□□□□□ -1.18
MCF2L2-203ENST00000447025 MRPS34P82930 218 aaKnown RBP7.67□□□□□ -1.18
MCF2L2-203ENST00000447025 ZXDBP98169 803 aa7.67□□□□□ -1.18
MCF2L2-203ENST00000447025 SCAPQ12770 1279 aa7.67□□□□□ -1.18
MCF2L2-203ENST00000447025 IL10RAQ13651 578 aa7.67□□□□□ -1.18
MCF2L2-203ENST00000447025 WIPI1Q5MNZ9 446 aaPredicted RBP7.67□□□□□ -1.18
MCF2L2-203ENST00000447025 ZNF776Q68DI1 518 aaPredicted RBP7.67□□□□□ -1.18
MCF2L2-203ENST00000447025 PAQR9Q6ZVX9 377 aa7.67□□□□□ -1.18
MCF2L2-203ENST00000447025 OR5AP2Q8NGF4 316 aa7.67□□□□□ -1.18
MCF2L2-203ENST00000447025 OR52P1PQ8NH57 321 aa7.67□□□□□ -1.18
MCF2L2-203ENST00000447025 THEM6Q8WUY1 208 aa7.67□□□□□ -1.18
MCF2L2-203ENST00000447025 RNF183Q96D59 192 aa7.67□□□□□ -1.18
MCF2L2-203ENST00000447025 FAM46AQ96IP4 442 aaKnown RBP7.67□□□□□ -1.18
MCF2L2-203ENST00000447025 SPATA25Q9BR10 227 aa7.67□□□□□ -1.18
MCF2L2-203ENST00000447025 C20orf24Q9BUV8 137 aa7.67□□□□□ -1.18
MCF2L2-203ENST00000447025 SMG9Q9H0W8 520 aaKnown RBP7.67□□□□□ -1.18
MCF2L2-203ENST00000447025 TCEAL2Q9H3H9 227 aaPredicted RBP7.67□□□□□ -1.18
MCF2L2-203ENST00000447025 MAGIXQ9H6Y5 334 aa7.67□□□□□ -1.18
MCF2L2-203ENST00000447025 AKIRIN1Q9H9L7 192 aaPredicted RBP7.67□□□□□ -1.18
MCF2L2-203ENST00000447025 A4GALTQ9NPC4 353 aa7.67□□□□□ -1.18
MCF2L2-203ENST00000447025 NOX4Q9NPH5 578 aa7.67□□□□□ -1.18
MCF2L2-203ENST00000447025 TAS2R8Q9NYW2 309 aa7.67□□□□□ -1.18
MCF2L2-203ENST00000447025 THYN1Q9P016 225 aa7.67□□□□□ -1.18
MCF2L2-203ENST00000447025 MARCH2Q9P0N8 246 aa7.67□□□□□ -1.18
MCF2L2-203ENST00000447025 A0A087WX48 190 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 A0A1W2PQM1 296 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 TCRBV7S3A2A0A539 114 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 GAGE12HA6NDE8 117 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 B5MCH6 92 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 ZNF878C9JN71 531 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 P2RX6O15547 441 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 ENTPD6O75354 484 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 ESR1P03372 595 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 CRYGBP07316 175 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 IGLC1P0CG04 106 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 GYG1P46976 350 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 NPBWR2P48146 333 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 LCN2P80188 198 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 FOXE3Q13461 319 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 PDGFRLQ15198 375 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 MRPL23Q16540 153 aaKnown RBP7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 SPATA31B1PQ5VZV4 182 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 PARS2Q7L3T8 475 aaKnown RBP7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 SYS1Q8N2H4 156 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 EID2Q8N6I1 236 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 OR9G4Q8NGQ1 327 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 SNIP1Q8TAD8 396 aaKnown RBP7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 APOBEC3DQ96AK3 386 aaPredicted RBP7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 MICU1Q9BPX6 476 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 DERL1Q9BUN8 251 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 MCRIP2Q9BUT9 160 aaKnown RBP7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 VAMP8Q9BV40 100 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 VN1R1Q9GZP7 353 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 TMEM39BQ9GZU3 492 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 CTDSP1Q9GZU7 261 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 CDH20Q9HBT6 801 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 INPP5EQ9NRR6 644 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 SLC7A7Q9UM01 511 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 FNDC3AQ9Y2H6 1198 aaKnown RBP7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 TRAV14DV4A0A0A6YYC5 116 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 NAP1L6A6NFF2 107 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 C3orf70A6NLC5 250 aaPredicted RBP7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 PIRO00625 290 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 CT45A8P0DMV1 189 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 CT45A9P0DMV2 189 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 CEBPBP17676 345 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 ELK1P19419 428 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 CDKN2BP42772 138 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 HNRNPA3P51991 378 aaKnown RBP7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 SLC6A3Q01959 620 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 PRICKLE4Q2TBC4 344 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 ITPRIPL2Q3MIP1 535 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 TRMT12Q53H54 448 aaKnown RBP7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 CT45A2Q5DJT8 189 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 ZNF648Q5T619 568 aaPredicted RBP7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 RHBDD2Q6NTF9 364 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 GTF2H5Q6ZYL4 71 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 SHISA5Q8N114 240 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 MUC15Q8N387 334 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 ZIC5Q96T25 663 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 SPANXA1Q9NS26 97 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 PIGVQ9NUD9 493 aa7.66□□□□□ -1.18
MCF2L2-203ENST00000447025 A0A1W2PRU2 124 aa7.65□□□□□ -1.18
MCF2L2-203ENST00000447025 C21orf140B9A014 251 aa7.65□□□□□ -1.18
MCF2L2-203ENST00000447025 GRAP2O75791 330 aa7.65□□□□□ -1.18
MCF2L2-203ENST00000447025 TIAF1O95411 115 aa7.65□□□□□ -1.18
MCF2L2-203ENST00000447025 TBX6O95947 436 aaPredicted RBP7.65□□□□□ -1.18
MCF2L2-203ENST00000447025 PIPP12273 146 aaPredicted RBP7.65□□□□□ -1.18
MCF2L2-203ENST00000447025 EN2P19622 333 aaPredicted RBP7.65□□□□□ -1.18
MCF2L2-203ENST00000447025 NTSR1P30989 418 aa7.65□□□□□ -1.18
MCF2L2-203ENST00000447025 RPL22P35268 128 aaKnown RBP7.65□□□□□ -1.18
MCF2L2-203ENST00000447025 SOAT1P35610 550 aa7.65□□□□□ -1.18
MCF2L2-203ENST00000447025 RPL7AP62424 266 aaKnown RBP7.65□□□□□ -1.18
MCF2L2-203ENST00000447025 ELAVL3Q14576 367 aaKnown RBP7.65□□□□□ -1.18
MCF2L2-203ENST00000447025 DOK7Q18PE1 504 aa7.65□□□□□ -1.18
MCF2L2-203ENST00000447025 CPZQ66K79 652 aa7.65□□□□□ -1.18
MCF2L2-203ENST00000447025 TNFAIP8L2Q6P589 184 aaPredicted RBP7.65□□□□□ -1.18
MCF2L2-203ENST00000447025 NCEH1Q6PIU2 408 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms