RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 BCL2L15Q5TBC7 163 aa17.54■□□□□ 0.4
CDKN3-204ENST00000442975 WDR82Q6UXN9 313 aa17.54■□□□□ 0.4
CDKN3-204ENST00000442975 THAP5Q7Z6K1 395 aa17.54■□□□□ 0.4
CDKN3-204ENST00000442975 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.54■□□□□ 0.4
CDKN3-204ENST00000442975 OR10H4Q8NGA5 316 aa17.54■□□□□ 0.4
CDKN3-204ENST00000442975 HPSE2Q8WWQ2 592 aa17.54■□□□□ 0.4
CDKN3-204ENST00000442975 OR5P3Q8WZ94 311 aa17.54■□□□□ 0.4
CDKN3-204ENST00000442975 RPL3LQ92901 407 aaKnown RBP17.54■□□□□ 0.4
CDKN3-204ENST00000442975 HIST1H2AAQ96QV6 131 aa17.54■□□□□ 0.4
CDKN3-204ENST00000442975 RNPEPL1Q9HAU8 725 aa17.54■□□□□ 0.4
CDKN3-204ENST00000442975 WARS2Q9UGM6 360 aaKnown RBP17.54■□□□□ 0.4
CDKN3-204ENST00000442975 NUFIP1Q9UHK0 495 aaKnown RBP17.54■□□□□ 0.4
CDKN3-204ENST00000442975 NUP50Q9UKX7 468 aa17.54■□□□□ 0.4
CDKN3-204ENST00000442975 HTR1FP30939 366 aa17.53■□□□□ 0.4
CDKN3-204ENST00000442975 DCTDP32321 178 aa17.53■□□□□ 0.4
CDKN3-204ENST00000442975 ATP6V1E1P36543 226 aa17.53■□□□□ 0.4
CDKN3-204ENST00000442975 MAP2K3P46734 347 aa17.53■□□□□ 0.4
CDKN3-204ENST00000442975 HILS1P60008 231 aa17.53■□□□□ 0.4
CDKN3-204ENST00000442975 PAX8Q06710 450 aa17.53■□□□□ 0.4
CDKN3-204ENST00000442975 KLF17Q5JT82 389 aaPredicted RBP17.53■□□□□ 0.4
CDKN3-204ENST00000442975 CEP78Q5JTW2 689 aa17.53■□□□□ 0.4
CDKN3-204ENST00000442975 ZNF841Q6ZN19 808 aa17.53■□□□□ 0.4
CDKN3-204ENST00000442975 C11orf53Q8IXP5 236 aa17.53■□□□□ 0.4
CDKN3-204ENST00000442975 OR8J1Q8NGP2 316 aa17.53■□□□□ 0.4
CDKN3-204ENST00000442975 RNF170Q96K19 258 aa17.53■□□□□ 0.4
CDKN3-204ENST00000442975 MOB1AQ9H8S9 216 aa17.53■□□□□ 0.4
CDKN3-204ENST00000442975 SMURF1Q9HCE7 757 aa17.53■□□□□ 0.4
CDKN3-204ENST00000442975 HAO2Q9NYQ3 351 aa17.53■□□□□ 0.4
CDKN3-204ENST00000442975 R4GMQ9 66 aa17.53■□□□□ 0.4
CDKN3-204ENST00000442975 ANK2Q01484 3957 aa17.53■□□□□ 0.4
CDKN3-204ENST00000442975 TMEM210A6NLX4 147 aa17.52■□□□□ 0.4
CDKN3-204ENST00000442975 TMPRSS2O15393 492 aa17.52■□□□□ 0.4
CDKN3-204ENST00000442975 NDUFA2O43678 99 aa17.52■□□□□ 0.4
CDKN3-204ENST00000442975 ENSAO43768 121 aaKnown RBP17.52■□□□□ 0.4
CDKN3-204ENST00000442975 ALPLP05186 524 aa17.52■□□□□ 0.4
CDKN3-204ENST00000442975 KRT8P05787 483 aa17.52■□□□□ 0.4
CDKN3-204ENST00000442975 FAHP16930 419 aa17.52■□□□□ 0.4
CDKN3-204ENST00000442975 NPY4RP50391 375 aa17.52■□□□□ 0.4
CDKN3-204ENST00000442975 GPM6AP51674 278 aa17.52■□□□□ 0.4
CDKN3-204ENST00000442975 EGR3Q06889 387 aa17.52■□□□□ 0.4
CDKN3-204ENST00000442975 MICBQ29980 383 aa17.52■□□□□ 0.4
CDKN3-204ENST00000442975 TEX36Q5VZQ5 186 aa17.52■□□□□ 0.4
CDKN3-204ENST00000442975 USP43Q70EL4 1123 aa17.52■□□□□ 0.4
CDKN3-204ENST00000442975 CBR4Q8N4T8 237 aa17.52■□□□□ 0.4
CDKN3-204ENST00000442975 PPP1R14AQ96A00 147 aa17.52■□□□□ 0.4
CDKN3-204ENST00000442975 JMJD8Q96S16 334 aa17.52■□□□□ 0.4
CDKN3-204ENST00000442975 FGF23Q9GZV9 251 aaPredicted RBP17.52■□□□□ 0.4
CDKN3-204ENST00000442975 ZNF69Q9UC07 566 aa17.52■□□□□ 0.4
CDKN3-204ENST00000442975 MRM2Q9UI43 246 aaKnown RBP17.52■□□□□ 0.4
CDKN3-204ENST00000442975 PIGLQ9Y2B2 252 aa17.52■□□□□ 0.4
CDKN3-204ENST00000442975 WNK2Q9Y3S1 2297 aa17.51■□□□□ 0.39
CDKN3-204ENST00000442975 TRAV40A0A0B4J280 105 aa17.51■□□□□ 0.39
CDKN3-204ENST00000442975 RPP14O95059 124 aaKnown RBP17.51■□□□□ 0.39
CDKN3-204ENST00000442975 LHBP01229 141 aa17.51■□□□□ 0.39
CDKN3-204ENST00000442975 IGHV4-38-2P0DP08 117 aa17.51■□□□□ 0.39
CDKN3-204ENST00000442975 ACTG1P63261 375 aa17.51■□□□□ 0.39
CDKN3-204ENST00000442975 RIPPLY1Q0D2K3 151 aa17.51■□□□□ 0.39
CDKN3-204ENST00000442975 ZIK1Q3SY52 487 aaPredicted RBP17.51■□□□□ 0.39
CDKN3-204ENST00000442975 DMRTC1Q5HYR2 192 aa17.51■□□□□ 0.39
CDKN3-204ENST00000442975 PLCXD3Q63HM9 321 aa17.51■□□□□ 0.39
CDKN3-204ENST00000442975 RBMS3Q6XE24 437 aaKnown RBP17.51■□□□□ 0.39
CDKN3-204ENST00000442975 SSX6Q7RTT6 188 aa17.51■□□□□ 0.39
CDKN3-204ENST00000442975 YIPF7Q8N8F6 280 aa17.51■□□□□ 0.39
CDKN3-204ENST00000442975 ST8SIA4Q92187 359 aa17.51■□□□□ 0.39
CDKN3-204ENST00000442975 RFKQ969G6 155 aa17.51■□□□□ 0.39
CDKN3-204ENST00000442975 EME1Q96AY2 570 aa17.51■□□□□ 0.39
CDKN3-204ENST00000442975 DACT3Q96B18 629 aaPredicted RBP17.51■□□□□ 0.39
CDKN3-204ENST00000442975 SEH1LQ96EE3 360 aa17.51■□□□□ 0.39
CDKN3-204ENST00000442975 TLNRD1Q9H1K6 362 aa17.51■□□□□ 0.39
CDKN3-204ENST00000442975 RASSF4Q9H2L5 321 aa17.51■□□□□ 0.39
CDKN3-204ENST00000442975 USE1Q9NZ43 259 aa17.51■□□□□ 0.39
CDKN3-204ENST00000442975 DNAJB11Q9UBS4 358 aa17.51■□□□□ 0.39
CDKN3-204ENST00000442975 OR52A1Q9UKL2 312 aa17.51■□□□□ 0.39
CDKN3-204ENST00000442975 ARHGAP32A7KAX9 2087 aa17.51■□□□□ 0.39
CDKN3-204ENST00000442975 KIR2DS1A0A191URI9 304 aa17.5■□□□□ 0.39
CDKN3-204ENST00000442975 DHRS3O75911 302 aa17.5■□□□□ 0.39
CDKN3-204ENST00000442975 TTRP02766 147 aa17.5■□□□□ 0.39
CDKN3-204ENST00000442975 ALDH3A2P51648 485 aa17.5■□□□□ 0.39
CDKN3-204ENST00000442975 FGF12P61328 243 aa17.5■□□□□ 0.39
CDKN3-204ENST00000442975 ELF3P78545 371 aaPredicted RBP17.5■□□□□ 0.39
CDKN3-204ENST00000442975 WDR38Q5JTN6 314 aa17.5■□□□□ 0.39
CDKN3-204ENST00000442975 CD276Q5ZPR3 534 aa17.5■□□□□ 0.39
CDKN3-204ENST00000442975 CCL13Q99616 98 aa17.5■□□□□ 0.39
CDKN3-204ENST00000442975 ENPP5Q9UJA9 477 aa17.5■□□□□ 0.39
CDKN3-204ENST00000442975 A0A1B0GW55 424 aa17.49■□□□□ 0.39
CDKN3-204ENST00000442975 A0A1W2PQL4 384 aaPredicted RBP17.49■□□□□ 0.39
CDKN3-204ENST00000442975 SRRM5B3KS81 715 aa17.49■□□□□ 0.39
CDKN3-204ENST00000442975 ZNF732B4DXR9 585 aa17.49■□□□□ 0.39
CDKN3-204ENST00000442975 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.49■□□□□ 0.39
CDKN3-204ENST00000442975 TRIM77I1YAP6 450 aa17.49■□□□□ 0.39
CDKN3-204ENST00000442975 DVL1O14640 695 aa17.49■□□□□ 0.39
CDKN3-204ENST00000442975 SRSF10O75494 262 aaKnown RBP17.49■□□□□ 0.39
CDKN3-204ENST00000442975 DUX4L2P0CJ85 424 aa17.49■□□□□ 0.39
CDKN3-204ENST00000442975 DUX4L3P0CJ86 424 aa17.49■□□□□ 0.39
CDKN3-204ENST00000442975 DUX4L4P0CJ87 422 aa17.49■□□□□ 0.39
CDKN3-204ENST00000442975 DUX4L5P0CJ88 424 aa17.49■□□□□ 0.39
CDKN3-204ENST00000442975 DUX4L6P0CJ89 424 aa17.49■□□□□ 0.39
CDKN3-204ENST00000442975 DUX4L7P0CJ90 424 aa17.49■□□□□ 0.39
CDKN3-204ENST00000442975 ATP6V1B1P15313 513 aa17.49■□□□□ 0.39
CDKN3-204ENST00000442975 MUC1P15941 1255 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms