RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 BABAM2Q9NXR7 383 aa13.52□□□□□ -0.25
USP39-205ENST00000442708 SCN3BQ9NY72 215 aa13.52□□□□□ -0.25
USP39-205ENST00000442708 PPP1R3CQ9UQK1 317 aa13.52□□□□□ -0.25
USP39-205ENST00000442708 MPC1Q9Y5U8 109 aa13.52□□□□□ -0.25
USP39-205ENST00000442708 A0A1B0GVI7 797 aa13.51□□□□□ -0.25
USP39-205ENST00000442708 PPIHO43447 177 aaKnown RBP13.51□□□□□ -0.25
USP39-205ENST00000442708 SYT7O43581 403 aa13.51□□□□□ -0.25
USP39-205ENST00000442708 MTRF1O75570 445 aaKnown RBP13.51□□□□□ -0.25
USP39-205ENST00000442708 UBCP0CG48 685 aaKnown RBP13.51□□□□□ -0.25
USP39-205ENST00000442708 GNALP38405 381 aa13.51□□□□□ -0.25
USP39-205ENST00000442708 GATA4P43694 442 aa13.51□□□□□ -0.25
USP39-205ENST00000442708 TMEM33P57088 247 aa13.51□□□□□ -0.25
USP39-205ENST00000442708 IRF3Q14653 427 aa13.51□□□□□ -0.25
USP39-205ENST00000442708 CEP78Q5JTW2 689 aa13.51□□□□□ -0.25
USP39-205ENST00000442708 AVPI1Q5T686 147 aa13.51□□□□□ -0.25
USP39-205ENST00000442708 TMEM42Q69YG0 159 aa13.51□□□□□ -0.25
USP39-205ENST00000442708 C11orf53Q8IXP5 236 aa13.51□□□□□ -0.25
USP39-205ENST00000442708 CELF2-AS1Q8N7Q2 184 aa13.51□□□□□ -0.25
USP39-205ENST00000442708 NANOGP1Q8N7R0 232 aa13.51□□□□□ -0.25
USP39-205ENST00000442708 ZFP41Q8N8Y5 198 aa13.51□□□□□ -0.25
USP39-205ENST00000442708 RGP1Q92546 391 aaPredicted RBP13.51□□□□□ -0.25
USP39-205ENST00000442708 MYDGFQ969H8 173 aa13.51□□□□□ -0.25
USP39-205ENST00000442708 CDCA4Q9BXL8 241 aa13.51□□□□□ -0.25
USP39-205ENST00000442708 TMEM106BQ9NUM4 274 aa13.51□□□□□ -0.25
USP39-205ENST00000442708 NOP16Q9Y3C1 178 aaKnown RBP13.51□□□□□ -0.25
USP39-205ENST00000442708 ABCA2Q9BZC7 2435 aa13.51□□□□□ -0.25
USP39-205ENST00000442708 TRBV2A0A0J9YWF9 115 aa13.5□□□□□ -0.25
USP39-205ENST00000442708 OGG1O15527 345 aa13.5□□□□□ -0.25
USP39-205ENST00000442708 MT-ND2P03891 347 aa13.5□□□□□ -0.25
USP39-205ENST00000442708 GRPP07492 148 aa13.5□□□□□ -0.25
USP39-205ENST00000442708 GPR6P46095 362 aaPredicted RBP13.5□□□□□ -0.25
USP39-205ENST00000442708 MRPL28Q13084 256 aaKnown RBP13.5□□□□□ -0.25
USP39-205ENST00000442708 CDK5R1Q15078 307 aa13.5□□□□□ -0.25
USP39-205ENST00000442708 RBM48Q5RL73 367 aaKnown RBP13.5□□□□□ -0.25
USP39-205ENST00000442708 ZBTB37Q5TC79 503 aa13.5□□□□□ -0.25
USP39-205ENST00000442708 TMEM244Q5VVB8 128 aa13.5□□□□□ -0.25
USP39-205ENST00000442708 RNLSQ5VYX0 342 aa13.5□□□□□ -0.25
USP39-205ENST00000442708 ZNF826PQ6ZT77 177 aa13.5□□□□□ -0.25
USP39-205ENST00000442708 MOB3CQ70IA8 216 aa13.5□□□□□ -0.25
USP39-205ENST00000442708 ZDHHC23Q8IYP9 409 aa13.5□□□□□ -0.25
USP39-205ENST00000442708 ZNF676Q8N7Q3 588 aa13.5□□□□□ -0.25
USP39-205ENST00000442708 OR8S1Q8NH09 359 aa13.5□□□□□ -0.25
USP39-205ENST00000442708 ITFG2Q969R8 447 aa13.5□□□□□ -0.25
USP39-205ENST00000442708 ADAT3Q96EY9 351 aaPredicted RBP13.5□□□□□ -0.25
USP39-205ENST00000442708 C18orf12Q96KH6 178 aa13.5□□□□□ -0.25
USP39-205ENST00000442708 SMR3AQ99954 134 aa13.5□□□□□ -0.25
USP39-205ENST00000442708 RASSF4Q9H2L5 321 aa13.5□□□□□ -0.25
USP39-205ENST00000442708 GPR173Q9NS66 373 aa13.5□□□□□ -0.25
USP39-205ENST00000442708 CHCHD3Q9NX63 227 aaKnown RBP13.5□□□□□ -0.25
USP39-205ENST00000442708 ENPP5Q9UJA9 477 aa13.5□□□□□ -0.25
USP39-205ENST00000442708 LSM2Q9Y333 95 aaKnown RBP13.5□□□□□ -0.25
USP39-205ENST00000442708 TPRKBQ9Y3C4 175 aa13.5□□□□□ -0.25
USP39-205ENST00000442708 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.49□□□□□ -0.25
USP39-205ENST00000442708 LRP5LA4QPB2 252 aa13.49□□□□□ -0.25
USP39-205ENST00000442708 DHRS7CA6NNS2 312 aa13.49□□□□□ -0.25
USP39-205ENST00000442708 CLDN25C9JDP6 229 aa13.49□□□□□ -0.25
USP39-205ENST00000442708 C3orf80F5H4A9 247 aa13.49□□□□□ -0.25
USP39-205ENST00000442708 TMEM178BH3BS89 294 aa13.49□□□□□ -0.25
USP39-205ENST00000442708 CYB5R3P00387 301 aaPredicted RBP13.49□□□□□ -0.25
USP39-205ENST00000442708 NRASP01111 189 aa13.49□□□□□ -0.25
USP39-205ENST00000442708 USF1P22415 310 aaPredicted RBP13.49□□□□□ -0.25
USP39-205ENST00000442708 IL2RGP31785 369 aa13.49□□□□□ -0.25
USP39-205ENST00000442708 LOXL1Q08397 574 aaPredicted RBP13.49□□□□□ -0.25
USP39-205ENST00000442708 ZNF154Q13106 437 aa13.49□□□□□ -0.25
USP39-205ENST00000442708 MED21Q13503 144 aa13.49□□□□□ -0.25
USP39-205ENST00000442708 CEACAM21Q3KPI0 293 aa13.49□□□□□ -0.25
USP39-205ENST00000442708 CCDC58Q4VC31 144 aa13.49□□□□□ -0.25
USP39-205ENST00000442708 FAM201AQ5SY85 155 aa13.49□□□□□ -0.25
USP39-205ENST00000442708 CLVS2Q5SYC1 327 aa13.49□□□□□ -0.25
USP39-205ENST00000442708 RPL22L1Q6P5R6 122 aaKnown RBP13.49□□□□□ -0.25
USP39-205ENST00000442708 FTMTQ8N4E7 242 aa13.49□□□□□ -0.25
USP39-205ENST00000442708 SPERTQ8NA61 448 aa13.49□□□□□ -0.25
USP39-205ENST00000442708 OR1M1Q8NGA1 313 aa13.49□□□□□ -0.25
USP39-205ENST00000442708 OR5AK2Q8NH90 309 aa13.49□□□□□ -0.25
USP39-205ENST00000442708 Q8TCH9 128 aa13.49□□□□□ -0.25
USP39-205ENST00000442708 RNF170Q96K19 258 aa13.49□□□□□ -0.25
USP39-205ENST00000442708 OR5M11Q96RB7 305 aa13.49□□□□□ -0.25
USP39-205ENST00000442708 Q9H521 79 aa13.49□□□□□ -0.25
USP39-205ENST00000442708 NARFLQ9H6Q4 476 aa13.49□□□□□ -0.25
USP39-205ENST00000442708 C14orf119Q9NWQ9 140 aa13.49□□□□□ -0.25
USP39-205ENST00000442708 WIPI2Q9Y4P8 454 aa13.49□□□□□ -0.25
USP39-205ENST00000442708 TMEM212A6NML5 194 aa13.48□□□□□ -0.25
USP39-205ENST00000442708 MYL12BO14950 172 aa13.48□□□□□ -0.25
USP39-205ENST00000442708 ZNF205O95201 554 aa13.48□□□□□ -0.25
USP39-205ENST00000442708 IGHV2-70P01814 119 aa13.48□□□□□ -0.25
USP39-205ENST00000442708 GPM6AP51674 278 aa13.48□□□□□ -0.25
USP39-205ENST00000442708 WNT4P56705 351 aa13.48□□□□□ -0.25
USP39-205ENST00000442708 KRTAP1-1Q07627 177 aa13.48□□□□□ -0.25
USP39-205ENST00000442708 UBE2V2Q15819 145 aa13.48□□□□□ -0.25
USP39-205ENST00000442708 FAM76BQ5HYJ3 339 aa13.48□□□□□ -0.25
USP39-205ENST00000442708 PLCXD3Q63HM9 321 aa13.48□□□□□ -0.25
USP39-205ENST00000442708 DMKNQ6E0U4 476 aaPredicted RBP13.48□□□□□ -0.25
USP39-205ENST00000442708 HAVCR2Q8TDQ0 301 aa13.48□□□□□ -0.25
USP39-205ENST00000442708 FGGYQ96C11 551 aa13.48□□□□□ -0.25
USP39-205ENST00000442708 RTL8AQ9BWD3 113 aa13.48□□□□□ -0.25
USP39-205ENST00000442708 TLNRD1Q9H1K6 362 aa13.48□□□□□ -0.25
USP39-205ENST00000442708 METTL17Q9H7H0 456 aaPredicted RBP13.48□□□□□ -0.25
USP39-205ENST00000442708 C1orf123Q9NWV4 160 aa13.48□□□□□ -0.25
USP39-205ENST00000442708 HHLA2Q9UM44 414 aa13.48□□□□□ -0.25
USP39-205ENST00000442708 ERGIC3Q9Y282 383 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms