RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 PGAM5Q96HS1 289 aa14.96□□□□□ -0.01
CCDC188-201ENST00000439765 SLC30A2Q9BRI3 323 aa14.96□□□□□ -0.01
CCDC188-201ENST00000439765 REPIN1Q9BWE0 567 aaKnown RBP14.96□□□□□ -0.01
CCDC188-201ENST00000439765 ZNF319Q9P2F9 582 aa14.96□□□□□ -0.01
CCDC188-201ENST00000439765 ACOD1A6NK06 481 aa14.95□□□□□ -0.02
CCDC188-201ENST00000439765 CD300LBA8K4G0 201 aa14.95□□□□□ -0.02
CCDC188-201ENST00000439765 OGG1O15527 345 aa14.95□□□□□ -0.02
CCDC188-201ENST00000439765 TAS2R43P59537 309 aa14.95□□□□□ -0.02
CCDC188-201ENST00000439765 MLLT11Q13015 90 aaPredicted RBP14.95□□□□□ -0.02
CCDC188-201ENST00000439765 AVPI1Q5T686 147 aa14.95□□□□□ -0.02
CCDC188-201ENST00000439765 RPL22L1Q6P5R6 122 aaKnown RBP14.95□□□□□ -0.02
CCDC188-201ENST00000439765 CATSPERDQ86XM0 798 aa14.95□□□□□ -0.02
CCDC188-201ENST00000439765 OR2G2Q8NGZ5 317 aa14.95□□□□□ -0.02
CCDC188-201ENST00000439765 DVL3Q92997 716 aaPredicted RBP14.95□□□□□ -0.02
CCDC188-201ENST00000439765 OPALINQ96PE5 141 aa14.95□□□□□ -0.02
CCDC188-201ENST00000439765 OR10A2Q9H208 303 aa14.95□□□□□ -0.02
CCDC188-201ENST00000439765 G6PC2Q9NQR9 355 aa14.95□□□□□ -0.02
CCDC188-201ENST00000439765 TMEM160Q9NX00 188 aa14.95□□□□□ -0.02
CCDC188-201ENST00000439765 FAM206AQ9NX38 181 aa14.95□□□□□ -0.02
CCDC188-201ENST00000439765 SIRT4Q9Y6E7 314 aaPredicted RBP14.95□□□□□ -0.02
CCDC188-201ENST00000439765 CLDN25C9JDP6 229 aa14.95□□□□□ -0.02
CCDC188-201ENST00000439765 F5H5P2 479 aa14.95□□□□□ -0.02
CCDC188-201ENST00000439765 LOC110117498-PIK3R3F6TDL0 507 aa14.95□□□□□ -0.02
CCDC188-201ENST00000439765 ZNF16P17020 682 aaPredicted RBP14.95□□□□□ -0.02
CCDC188-201ENST00000439765 TNFRSF1AP19438 455 aa14.95□□□□□ -0.02
CCDC188-201ENST00000439765 PSMB9P28065 219 aa14.95□□□□□ -0.02
CCDC188-201ENST00000439765 IL2RGP31785 369 aa14.95□□□□□ -0.02
CCDC188-201ENST00000439765 NANOS3P60323 173 aaKnown RBP14.95□□□□□ -0.02
CCDC188-201ENST00000439765 MFGE8Q08431 387 aaPredicted RBP14.95□□□□□ -0.02
CCDC188-201ENST00000439765 ALKBH1Q13686 389 aaKnown RBP14.95□□□□□ -0.02
CCDC188-201ENST00000439765 CHRFAM7AQ494W8 412 aa14.95□□□□□ -0.02
CCDC188-201ENST00000439765 ARMCX4Q5H9R4 360 aa14.95□□□□□ -0.02
CCDC188-201ENST00000439765 PRSS35Q8N3Z0 413 aa14.95□□□□□ -0.02
CCDC188-201ENST00000439765 OR8B12Q8NGG6 310 aa14.95□□□□□ -0.02
CCDC188-201ENST00000439765 RPS4Y2Q8TD47 263 aa14.95□□□□□ -0.02
CCDC188-201ENST00000439765 SPSB4Q96A44 273 aa14.95□□□□□ -0.02
CCDC188-201ENST00000439765 OPA3Q9H6K4 179 aa14.95□□□□□ -0.02
CCDC188-201ENST00000439765 SP140LQ9H930 580 aa14.95□□□□□ -0.02
CCDC188-201ENST00000439765 TMEM100Q9NV29 134 aa14.95□□□□□ -0.02
CCDC188-201ENST00000439765 DCAF16Q9NXF7 216 aa14.95□□□□□ -0.02
CCDC188-201ENST00000439765 FRRS1LQ9P0K9 344 aa14.95□□□□□ -0.02
CCDC188-201ENST00000439765 OR52A1Q9UKL2 312 aa14.95□□□□□ -0.02
CCDC188-201ENST00000439765 WNT9BO14905 357 aa14.94□□□□□ -0.02
CCDC188-201ENST00000439765 IGHV4-31P0DP07 118 aa14.94□□□□□ -0.02
CCDC188-201ENST00000439765 CA6P23280 308 aa14.94□□□□□ -0.02
CCDC188-201ENST00000439765 ALDH3B2P48448 385 aa14.94□□□□□ -0.02
CCDC188-201ENST00000439765 CCR9P51686 369 aa14.94□□□□□ -0.02
CCDC188-201ENST00000439765 GP2P55259 537 aaKnown RBP14.94□□□□□ -0.02
CCDC188-201ENST00000439765 TMEM33P57088 247 aa14.94□□□□□ -0.02
CCDC188-201ENST00000439765 TPBGQ13641 420 aa14.94□□□□□ -0.02
CCDC188-201ENST00000439765 CDK5R1Q15078 307 aa14.94□□□□□ -0.02
CCDC188-201ENST00000439765 WDR38Q5JTN6 314 aa14.94□□□□□ -0.02
CCDC188-201ENST00000439765 DMKNQ6E0U4 476 aaPredicted RBP14.94□□□□□ -0.02
CCDC188-201ENST00000439765 ZFP41Q8N8Y5 198 aa14.94□□□□□ -0.02
CCDC188-201ENST00000439765 PPP1R14AQ96A00 147 aa14.94□□□□□ -0.02
CCDC188-201ENST00000439765 SGK3Q96BR1 496 aa14.94□□□□□ -0.02
CCDC188-201ENST00000439765 MEGF10Q96KG7 1140 aa14.94□□□□□ -0.02
CCDC188-201ENST00000439765 ADAT1Q9BUB4 502 aaKnown RBP14.94□□□□□ -0.02
CCDC188-201ENST00000439765 PBOV1Q9GZY1 135 aa14.94□□□□□ -0.02
CCDC188-201ENST00000439765 MOB1AQ9H8S9 216 aa14.94□□□□□ -0.02
CCDC188-201ENST00000439765 IL19Q9UHD0 177 aa14.94□□□□□ -0.02
CCDC188-201ENST00000439765 GTF2A1LQ9UNN4 478 aa14.94□□□□□ -0.02
CCDC188-201ENST00000439765 SLC22A13Q9Y226 551 aa14.94□□□□□ -0.02
CCDC188-201ENST00000439765 CUBNO60494 3623 aa14.93□□□□□ -0.02
CCDC188-201ENST00000439765 TRBV2A0A0J9YWF9 115 aa14.93□□□□□ -0.02
CCDC188-201ENST00000439765 hCG_38984A0A1B0GV85 526 aa14.93□□□□□ -0.02
CCDC188-201ENST00000439765 PLPP2O43688 288 aa14.93□□□□□ -0.02
CCDC188-201ENST00000439765 CPEP16870 476 aa14.93□□□□□ -0.02
CCDC188-201ENST00000439765 CELP19835 753 aa14.93□□□□□ -0.02
CCDC188-201ENST00000439765 KIR3DL2P43630 455 aa14.93□□□□□ -0.02
CCDC188-201ENST00000439765 FAM3AP98173 230 aa14.93□□□□□ -0.02
CCDC188-201ENST00000439765 GPR50Q13585 617 aa14.93□□□□□ -0.02
CCDC188-201ENST00000439765 UFD1Q92890 307 aa14.93□□□□□ -0.02
CCDC188-201ENST00000439765 SOX7Q9BT81 388 aa14.93□□□□□ -0.02
CCDC188-201ENST00000439765 NUFIP1Q9UHK0 495 aaKnown RBP14.93□□□□□ -0.02
CCDC188-201ENST00000439765 CDC42EP3Q9UKI2 254 aa14.93□□□□□ -0.02
CCDC188-201ENST00000439765 PPP1R3CQ9UQK1 317 aa14.93□□□□□ -0.02
CCDC188-201ENST00000439765 WIPI2Q9Y4P8 454 aa14.93□□□□□ -0.02
CCDC188-201ENST00000439765 PNMA8CA0A1B0GUJ8 204 aa14.92□□□□□ -0.02
CCDC188-201ENST00000439765 OR4C45A6NMZ5 311 aa14.92□□□□□ -0.02
CCDC188-201ENST00000439765 IFNA2P01563 188 aa14.92□□□□□ -0.02
CCDC188-201ENST00000439765 CD1AP06126 327 aa14.92□□□□□ -0.02
CCDC188-201ENST00000439765 RPL5P46777 297 aaKnown RBP14.92□□□□□ -0.02
CCDC188-201ENST00000439765 OR8G1Q15617 311 aa14.92□□□□□ -0.02
CCDC188-201ENST00000439765 BCL2L15Q5TBC7 163 aa14.92□□□□□ -0.02
CCDC188-201ENST00000439765 LIPKQ5VXJ0 399 aa14.92□□□□□ -0.02
CCDC188-201ENST00000439765 CYB5R2Q6BCY4 276 aa14.92□□□□□ -0.02
CCDC188-201ENST00000439765 ELMOD2Q8IZ81 293 aa14.92□□□□□ -0.02
CCDC188-201ENST00000439765 CLDND2Q8NHS1 167 aa14.92□□□□□ -0.02
CCDC188-201ENST00000439765 SPATA3Q8NHX4 192 aa14.92□□□□□ -0.02
CCDC188-201ENST00000439765 SMIM19Q96E16 107 aa14.92□□□□□ -0.02
CCDC188-201ENST00000439765 TIMD4Q96H15 378 aa14.92□□□□□ -0.02
CCDC188-201ENST00000439765 GCM1Q9NP62 436 aa14.92□□□□□ -0.02
CCDC188-201ENST00000439765 MRPL15Q9P015 296 aaKnown RBP14.92□□□□□ -0.02
CCDC188-201ENST00000439765 A0A1B0GWJ7 208 aa14.91□□□□□ -0.02
CCDC188-201ENST00000439765 ISPDA4D126 451 aa14.91□□□□□ -0.02
CCDC188-201ENST00000439765 TTRP02766 147 aa14.91□□□□□ -0.02
CCDC188-201ENST00000439765 FAM157CP0CG43 387 aa14.91□□□□□ -0.02
CCDC188-201ENST00000439765 CFL1P23528 166 aaKnown RBP14.91□□□□□ -0.02
CCDC188-201ENST00000439765 SRP9P49458 86 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms