RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 CA3P07451 260 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 FAM157CP0CG43 387 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 TBPP20226 339 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 FPR2P25090 351 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 HAAOP46952 286 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 AFF3P51826 1226 aaKnown RBP8.04□□□□□ -1.12
COPB1-202ENST00000439561 HSF1Q00613 529 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 DMWDQ09019 674 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 ECH1Q13011 328 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 HNF4GQ14541 408 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 FLVCR1-AS1Q8TAF5 88 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 RLN3Q8WXF3 142 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 HOXB13Q92826 284 aaPredicted RBP8.04□□□□□ -1.12
COPB1-202ENST00000439561 DAZLQ92904 295 aaKnown RBP8.04□□□□□ -1.12
COPB1-202ENST00000439561 MRPL24Q96A35 216 aaKnown RBP8.04□□□□□ -1.12
COPB1-202ENST00000439561 ELSPBP1Q96BH3 223 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 LIN37Q96GY3 246 aaPredicted RBP8.04□□□□□ -1.12
COPB1-202ENST00000439561 SLC26A1Q9H2B4 701 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 TMPRSS5Q9H3S3 457 aa8.04□□□□□ -1.12
COPB1-202ENST00000439561 FAM186AA6NE01 2351 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 KIR2DS5A0A0G2JLQ3 304 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 A0A0G2JNG1 304 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 VSTM2BA6NLU5 285 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 KIR2DS3K7RE56 304 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 PLPP3O14495 311 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 RER1O15258 196 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 CDC14BO60729 498 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 SEMA4FO95754 770 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 TTRP02766 147 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 P2RY4P51582 365 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 ZNF121P58317 390 aaPredicted RBP8.03□□□□□ -1.12
COPB1-202ENST00000439561 KIR2DS5Q14953 304 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 PPA1Q15181 289 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 MST1LQ2TV78 715 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 TEX30Q5JUR7 227 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 AKR1C8PQ5T2L2 129 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 GGNBP1Q5YKI7 109 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 DNM1P46Q6ZS02 220 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 C6orf201Q7Z4U5 140 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 C20orf196Q8IYI0 205 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 ZNF383Q8NA42 475 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 OR13G1Q8NGZ3 307 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 NEK7Q8TDX7 302 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 FGF14Q92915 247 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 ZNF775Q96BV0 537 aaPredicted RBP8.03□□□□□ -1.12
COPB1-202ENST00000439561 C8orf44Q96CB5 159 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 SLC5A7Q9GZV3 580 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 MYOZ1Q9NP98 299 aaPredicted RBP8.03□□□□□ -1.12
COPB1-202ENST00000439561 C19orf12Q9NSK7 152 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 SLC2A8Q9NY64 477 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 GPR132Q9UNW8 380 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 CDRT15L2A8MXV6 281 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 F8VVB4 439 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 F8VWA3 439 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 MELTFP08582 738 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 HKR1P10072 659 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 HOXB1P14653 301 aaPredicted RBP8.03□□□□□ -1.12
COPB1-202ENST00000439561 ACKR3P25106 362 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 SULT1A2P50226 295 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 PIGPP57054 158 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 RSU1Q15404 277 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 CDCP2Q5VXM1 449 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 Q7L0L9 218 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 GRINAQ7Z429 371 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 LRRC18Q8N456 261 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 C17orf78Q8N4C9 275 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 PAQR4Q8N4S7 273 aaPredicted RBP8.03□□□□□ -1.12
COPB1-202ENST00000439561 STT3BQ8TCJ2 826 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 EMG1Q92979 244 aaKnown RBP8.03□□□□□ -1.12
COPB1-202ENST00000439561 VWCEQ96DN2 955 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 OR5B2Q96R09 309 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 CCNL2Q96S94 520 aaPredicted RBP8.03□□□□□ -1.12
COPB1-202ENST00000439561 HDHD3Q9BSH5 251 aaPredicted RBP8.03□□□□□ -1.12
COPB1-202ENST00000439561 LPAR5Q9H1C0 372 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 GAR1Q9NY12 217 aaKnown RBP8.03□□□□□ -1.12
COPB1-202ENST00000439561 SUSD2Q9UGT4 822 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 PADI1Q9ULC6 663 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 DENND4AQ7Z401 1863 aa8.03□□□□□ -1.12
COPB1-202ENST00000439561 UNC13CQ8NB66 2214 aa8.02□□□□□ -1.12
COPB1-202ENST00000439561 IGKV1D-43A0A0B4J1Z2 117 aa8.02□□□□□ -1.12
COPB1-202ENST00000439561 A0A1W2PNR3 127 aa8.02□□□□□ -1.12
COPB1-202ENST00000439561 C5orf52A6NGY3 159 aa8.02□□□□□ -1.12
COPB1-202ENST00000439561 PPP1R2P9O14990 202 aa8.02□□□□□ -1.12
COPB1-202ENST00000439561 YKT6O15498 198 aa8.02□□□□□ -1.12
COPB1-202ENST00000439561 GNRH1P01148 92 aa8.02□□□□□ -1.12
COPB1-202ENST00000439561 FSTP19883 344 aa8.02□□□□□ -1.12
COPB1-202ENST00000439561 ZNF84P51523 738 aa8.02□□□□□ -1.12
COPB1-202ENST00000439561 HERV-K104P61576 105 aa8.02□□□□□ -1.12
COPB1-202ENST00000439561 ROM1Q03395 351 aa8.02□□□□□ -1.12
COPB1-202ENST00000439561 FUT7Q11130 342 aa8.02□□□□□ -1.12
COPB1-202ENST00000439561 PDCD1Q15116 288 aa8.02□□□□□ -1.12
COPB1-202ENST00000439561 TAF9Q16594 264 aa8.02□□□□□ -1.12
COPB1-202ENST00000439561 C1orf100Q5SVJ3 147 aa8.02□□□□□ -1.12
COPB1-202ENST00000439561 FAM166AQ6J272 317 aa8.02□□□□□ -1.12
COPB1-202ENST00000439561 H1FNTQ75WM6 255 aaPredicted RBP8.02□□□□□ -1.12
COPB1-202ENST00000439561 UEVLDQ8IX04 471 aa8.02□□□□□ -1.12
COPB1-202ENST00000439561 APCDD1LQ8NCL9 501 aa8.02□□□□□ -1.12
COPB1-202ENST00000439561 ERGIC1Q969X5 290 aa8.02□□□□□ -1.12
COPB1-202ENST00000439561 OCSTAMPQ9BR26 566 aa8.02□□□□□ -1.12
COPB1-202ENST00000439561 MAGT1Q9H0U3 335 aa8.02□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms