RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 ZNF883P0CG24 379 aa14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 ADCYAP1P18509 176 aa14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 SUPT4H1P63272 117 aaKnown RBP14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 EIF3IQ13347 325 aaKnown RBP14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 SLC9A3R2Q15599 337 aa14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 SGCAQ16586 387 aa14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 ZNF239Q16600 458 aaKnown RBP14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 HIST3H3Q16695 136 aa14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 NKAIN1Q4KMZ8 207 aa14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 PRSS54Q6PEW0 395 aa14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 SLC38A9Q8NBW4 561 aa14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 OR5H2Q8NGV7 314 aa14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 ROBO4Q8WZ75 1007 aa14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 ARL11Q969Q4 196 aa14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 SCGB3A2Q96PL1 93 aa14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 TSNAXQ99598 290 aaKnown RBP14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 EP300Q09472 2414 aaPredicted RBP14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 IGKV1-9A0A0C4DH69 117 aa14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 GPR31O00270 319 aa14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 ADAP1O75689 374 aa14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 CRTAPO75718 401 aaPredicted RBP14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 ACTL6AO96019 429 aa14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 FLI1Q01543 452 aaPredicted RBP14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 STK11Q15831 433 aa14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 C10orf91Q5T1B1 145 aa14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 CARD17Q5XLA6 110 aa14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 DBX2Q6ZNG2 339 aa14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 IQCF2Q8IXL9 164 aa14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 PUSL1Q8N0Z8 303 aaKnown RBP14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 SVBPQ8N300 66 aa14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 FAM89BQ8N5H3 189 aa14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 OR10G3Q8NGC4 313 aa14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 OR5L2Q8NGL0 311 aa14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 OR13G1Q8NGZ3 307 aa14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 RHBDD1Q8TEB9 315 aa14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 PAQR8Q8TEZ7 354 aa14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 RNF141Q8WVD5 230 aa14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 RTBDNQ9BSG5 229 aaPredicted RBP14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 URM1Q9BTM9 101 aaKnown RBP14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 OSGIN2Q9Y236 505 aa14.43□□□□□ -0.1
CLCNKA-203ENST00000439316 A0A1W2PNR3 127 aa14.42□□□□□ -0.1
CLCNKA-203ENST00000439316 MSGN1A6NI15 193 aa14.42□□□□□ -0.1
CLCNKA-203ENST00000439316 FOXI3A8MTJ6 420 aaPredicted RBP14.42□□□□□ -0.1
CLCNKA-203ENST00000439316 TIAF1O95411 115 aa14.42□□□□□ -0.1
CLCNKA-203ENST00000439316 OPN1LWP04000 364 aa14.42□□□□□ -0.1
CLCNKA-203ENST00000439316 AMY2BP19961 511 aa14.42□□□□□ -0.1
CLCNKA-203ENST00000439316 SLC6A9P48067 706 aa14.42□□□□□ -0.1
CLCNKA-203ENST00000439316 GRB2P62993 217 aaKnown RBP14.42□□□□□ -0.1
CLCNKA-203ENST00000439316 AIMP2Q13155 320 aaKnown RBP14.42□□□□□ -0.1
CLCNKA-203ENST00000439316 ANKRD55Q3KP44 614 aa14.42□□□□□ -0.1
CLCNKA-203ENST00000439316 FAM57BQ71RH2 274 aa14.42□□□□□ -0.1
CLCNKA-203ENST00000439316 OR2M3Q8NG83 312 aa14.42□□□□□ -0.1
CLCNKA-203ENST00000439316 OR10Z1Q8NGY1 313 aa14.42□□□□□ -0.1
CLCNKA-203ENST00000439316 OR14K1Q8NGZ2 314 aa14.42□□□□□ -0.1
CLCNKA-203ENST00000439316 OXGR1Q96P68 337 aa14.42□□□□□ -0.1
CLCNKA-203ENST00000439316 AQP10Q96PS8 301 aa14.42□□□□□ -0.1
CLCNKA-203ENST00000439316 OR5B2Q96R09 309 aa14.42□□□□□ -0.1
CLCNKA-203ENST00000439316 OR10A2Q9H208 303 aa14.42□□□□□ -0.1
CLCNKA-203ENST00000439316 METTL7AQ9H8H3 244 aa14.42□□□□□ -0.1
CLCNKA-203ENST00000439316 OTOGLQ3ZCN5 2332 aa14.42□□□□□ -0.1
CLCNKA-203ENST00000439316 NTN3O00634 580 aaPredicted RBP14.42□□□□□ -0.1
CLCNKA-203ENST00000439316 PRF1P14222 555 aa14.42□□□□□ -0.1
CLCNKA-203ENST00000439316 NKAPLQ5M9Q1 402 aa14.42□□□□□ -0.1
CLCNKA-203ENST00000439316 AADACL3Q5VUY0 350 aa14.42□□□□□ -0.1
CLCNKA-203ENST00000439316 NSUN5P2Q63ZY6 315 aa14.42□□□□□ -0.1
CLCNKA-203ENST00000439316 CRIP3Q6Q6R5 217 aa14.42□□□□□ -0.1
CLCNKA-203ENST00000439316 DRAM2Q6UX65 266 aa14.42□□□□□ -0.1
CLCNKA-203ENST00000439316 ZNF283Q8N7M2 679 aa14.42□□□□□ -0.1
CLCNKA-203ENST00000439316 BHLHE23Q8NDY6 225 aa14.42□□□□□ -0.1
CLCNKA-203ENST00000439316 TMED6Q8WW62 240 aa14.42□□□□□ -0.1
CLCNKA-203ENST00000439316 GPER1Q99527 375 aa14.42□□□□□ -0.1
CLCNKA-203ENST00000439316 OCIAD1Q9NX40 245 aa14.42□□□□□ -0.1
CLCNKA-203ENST00000439316 OR5AC2Q9NZP5 309 aa14.42□□□□□ -0.1
CLCNKA-203ENST00000439316 RARRES3Q9UL19 164 aa14.42□□□□□ -0.1
CLCNKA-203ENST00000439316 CARHSP1Q9Y2V2 147 aaKnown RBP14.42□□□□□ -0.1
CLCNKA-203ENST00000439316 RAMP1O60894 148 aa14.41□□□□□ -0.1
CLCNKA-203ENST00000439316 IGLV3-1P01715 115 aa14.41□□□□□ -0.1
CLCNKA-203ENST00000439316 QDPRP09417 244 aa14.41□□□□□ -0.1
CLCNKA-203ENST00000439316 FAM157CP0CG43 387 aa14.41□□□□□ -0.1
CLCNKA-203ENST00000439316 RPS2P15880 293 aaKnown RBP14.41□□□□□ -0.1
CLCNKA-203ENST00000439316 PI3P19957 117 aa14.41□□□□□ -0.1
CLCNKA-203ENST00000439316 ALDH3B1P43353 468 aa14.41□□□□□ -0.1
CLCNKA-203ENST00000439316 AKR1C2P52895 323 aa14.41□□□□□ -0.1
CLCNKA-203ENST00000439316 AKR1C1Q04828 323 aa14.41□□□□□ -0.1
CLCNKA-203ENST00000439316 ARFRP1Q13795 201 aa14.41□□□□□ -0.1
CLCNKA-203ENST00000439316 GUCA2BQ16661 112 aa14.41□□□□□ -0.1
CLCNKA-203ENST00000439316 PLEKHN1Q494U1 663 aaPredicted RBP14.41□□□□□ -0.1
CLCNKA-203ENST00000439316 POC1AQ8NBT0 407 aa14.41□□□□□ -0.1
CLCNKA-203ENST00000439316 MMP26Q9NRE1 261 aa14.41□□□□□ -0.1
CLCNKA-203ENST00000439316 PRR13Q9NZ81 148 aa14.41□□□□□ -0.1
CLCNKA-203ENST00000439316 MYOTQ9UBF9 498 aa14.41□□□□□ -0.1
CLCNKA-203ENST00000439316 ZNF629Q9UEG4 869 aaPredicted RBP14.41□□□□□ -0.1
CLCNKA-203ENST00000439316 PRELID3BQ9Y3B1 194 aa14.41□□□□□ -0.1
CLCNKA-203ENST00000439316 AQP7P3A6NL99 342 aa14.4□□□□□ -0.1
CLCNKA-203ENST00000439316 ZFAND5O76080 213 aa14.4□□□□□ -0.1
CLCNKA-203ENST00000439316 CTSSP25774 331 aa14.4□□□□□ -0.1
CLCNKA-203ENST00000439316 TAS2R46P59540 309 aa14.4□□□□□ -0.1
CLCNKA-203ENST00000439316 SCRN3Q0VDG4 424 aa14.4□□□□□ -0.1
CLCNKA-203ENST00000439316 IL15RAQ13261 267 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms