RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 FUT6P51993 359 aa10.93□□□□□ -0.66
TCOF1-205ENST00000439160 SNRPNP63162 240 aaKnown RBP10.93□□□□□ -0.66
TCOF1-205ENST00000439160 SRPXP78539 464 aa10.93□□□□□ -0.66
TCOF1-205ENST00000439160 CDC20BQ86Y33 519 aa10.93□□□□□ -0.66
TCOF1-205ENST00000439160 AICDAQ9GZX7 198 aa10.93□□□□□ -0.66
TCOF1-205ENST00000439160 RNF32Q9H0A6 362 aa10.93□□□□□ -0.66
TCOF1-205ENST00000439160 ZNF71Q9NQZ8 489 aaPredicted RBP10.93□□□□□ -0.66
TCOF1-205ENST00000439160 MN1Q10571 1320 aaPredicted RBP10.93□□□□□ -0.66
TCOF1-205ENST00000439160 C17orf51A8MQB3 221 aa10.93□□□□□ -0.66
TCOF1-205ENST00000439160 CLDN1O95832 211 aa10.93□□□□□ -0.66
TCOF1-205ENST00000439160 LINC00271P0C7V0 271 aa10.93□□□□□ -0.66
TCOF1-205ENST00000439160 SELEP16581 610 aa10.93□□□□□ -0.66
TCOF1-205ENST00000439160 ALKBH6Q3KRA9 238 aa10.93□□□□□ -0.66
TCOF1-205ENST00000439160 PLEKHA3Q9HB20 300 aa10.93□□□□□ -0.66
TCOF1-205ENST00000439160 GHRLQ9UBU3 117 aa10.93□□□□□ -0.66
TCOF1-205ENST00000439160 VWA8A3KMH1 1905 aa10.92□□□□□ -0.66
TCOF1-205ENST00000439160 PYCARD-AS1I3L0S3 204 aa10.92□□□□□ -0.66
TCOF1-205ENST00000439160 SULT1C2O00338 296 aa10.92□□□□□ -0.66
TCOF1-205ENST00000439160 TSPAN2O60636 221 aa10.92□□□□□ -0.66
TCOF1-205ENST00000439160 TIAF1O95411 115 aa10.92□□□□□ -0.66
TCOF1-205ENST00000439160 TBX6O95947 436 aaPredicted RBP10.92□□□□□ -0.66
TCOF1-205ENST00000439160 SERPINF1P36955 418 aa10.92□□□□□ -0.66
TCOF1-205ENST00000439160 LIMS1P48059 325 aa10.92□□□□□ -0.66
TCOF1-205ENST00000439160 RPS23P62266 143 aaKnown RBP10.92□□□□□ -0.66
TCOF1-205ENST00000439160 GFRALQ6UXV0 394 aa10.92□□□□□ -0.66
TCOF1-205ENST00000439160 TMEM200AQ86VY9 491 aa10.92□□□□□ -0.66
TCOF1-205ENST00000439160 CXorf67Q86X51 503 aaPredicted RBP10.92□□□□□ -0.66
TCOF1-205ENST00000439160 KCNJ16Q9NPI9 418 aa10.92□□□□□ -0.66
TCOF1-205ENST00000439160 TMEM272A0A1B0GTI8 110 aa10.92□□□□□ -0.66
TCOF1-205ENST00000439160 LRRC30A6NM36 301 aa10.92□□□□□ -0.66
TCOF1-205ENST00000439160 OR4C45A6NMZ5 311 aa10.92□□□□□ -0.66
TCOF1-205ENST00000439160 SH2D1BO14796 132 aa10.92□□□□□ -0.66
TCOF1-205ENST00000439160 LIFP15018 202 aa10.92□□□□□ -0.66
TCOF1-205ENST00000439160 IL11P20809 199 aa10.92□□□□□ -0.66
TCOF1-205ENST00000439160 NME2P22392 152 aa10.92□□□□□ -0.66
TCOF1-205ENST00000439160 S100A2P29034 98 aa10.92□□□□□ -0.66
TCOF1-205ENST00000439160 ARHGEF39Q8N4T4 335 aa10.92□□□□□ -0.66
TCOF1-205ENST00000439160 OR51A4Q8NGJ6 313 aa10.92□□□□□ -0.66
TCOF1-205ENST00000439160 GIPP09681 153 aaPredicted RBP10.92□□□□□ -0.66
TCOF1-205ENST00000439160 BMP5P22003 454 aa10.92□□□□□ -0.66
TCOF1-205ENST00000439160 ECI1P42126 302 aa10.92□□□□□ -0.66
TCOF1-205ENST00000439160 CRYBA2P53672 197 aa10.92□□□□□ -0.66
TCOF1-205ENST00000439160 OR2B11Q5JQS5 317 aa10.92□□□□□ -0.66
TCOF1-205ENST00000439160 TUSC5Q8IXB3 177 aa10.92□□□□□ -0.66
TCOF1-205ENST00000439160 OR2AK2Q8NG84 335 aa10.92□□□□□ -0.66
TCOF1-205ENST00000439160 OR8B12Q8NGG6 310 aa10.92□□□□□ -0.66
TCOF1-205ENST00000439160 UBALD1Q8TB05 177 aa10.92□□□□□ -0.66
TCOF1-205ENST00000439160 SPSB1Q96BD6 273 aa10.92□□□□□ -0.66
TCOF1-205ENST00000439160 ARHGAP5-AS1Q96IT6 56 aa10.92□□□□□ -0.66
TCOF1-205ENST00000439160 CNTD2Q9H8S5 307 aa10.92□□□□□ -0.66
TCOF1-205ENST00000439160 SIRT4Q9Y6E7 314 aaPredicted RBP10.92□□□□□ -0.66
TCOF1-205ENST00000439160 RAB27BO00194 218 aa10.91□□□□□ -0.66
TCOF1-205ENST00000439160 DCTN6O00399 190 aa10.91□□□□□ -0.66
TCOF1-205ENST00000439160 CTAG2O75638 210 aa10.91□□□□□ -0.66
TCOF1-205ENST00000439160 CRYABP02511 175 aaKnown RBP10.91□□□□□ -0.66
TCOF1-205ENST00000439160 PTGFRP43088 359 aa10.91□□□□□ -0.66
TCOF1-205ENST00000439160 FHL5Q5TD97 284 aa10.91□□□□□ -0.66
TCOF1-205ENST00000439160 TMEM91Q6ZNR0 172 aa10.91□□□□□ -0.66
TCOF1-205ENST00000439160 SLC51BQ86UW2 128 aa10.91□□□□□ -0.66
TCOF1-205ENST00000439160 ZNF808Q8N4W9 903 aaPredicted RBP10.91□□□□□ -0.66
TCOF1-205ENST00000439160 RFLNBQ8N5W9 214 aa10.91□□□□□ -0.66
TCOF1-205ENST00000439160 TRMT61AQ96FX7 289 aaKnown RBP10.91□□□□□ -0.66
TCOF1-205ENST00000439160 ARPC5LQ9BPX5 153 aa10.91□□□□□ -0.66
TCOF1-205ENST00000439160 EGLN1Q9GZT9 426 aa10.91□□□□□ -0.66
TCOF1-205ENST00000439160 B4E171 279 aa10.91□□□□□ -0.66
TCOF1-205ENST00000439160 SNCAP37840 140 aa10.91□□□□□ -0.66
TCOF1-205ENST00000439160 TSPAN7P41732 249 aa10.91□□□□□ -0.66
TCOF1-205ENST00000439160 KRBOX4Q5JUW0 171 aa10.91□□□□□ -0.66
TCOF1-205ENST00000439160 OR2A2Q6IF42 318 aa10.91□□□□□ -0.66
TCOF1-205ENST00000439160 BRICD5Q6PL45 260 aa10.91□□□□□ -0.66
TCOF1-205ENST00000439160 ZNF385AQ96PM9 386 aaKnown RBP10.91□□□□□ -0.66
TCOF1-205ENST00000439160 PRMT8Q9NR22 394 aaPredicted RBP10.91□□□□□ -0.66
TCOF1-205ENST00000439160 FBXO7Q9Y3I1 522 aa10.91□□□□□ -0.66
TCOF1-205ENST00000439160 BDP1A6H8Y1 2624 aa10.91□□□□□ -0.66
TCOF1-205ENST00000439160 A0A1B0GUH1 482 aa10.91□□□□□ -0.66
TCOF1-205ENST00000439160 MEX3AA1L020 520 aaKnown RBP10.91□□□□□ -0.66
TCOF1-205ENST00000439160 AQP7P3A6NL99 342 aa10.91□□□□□ -0.66
TCOF1-205ENST00000439160 ENSAO43768 121 aaKnown RBP10.91□□□□□ -0.66
TCOF1-205ENST00000439160 OR3A4PP47883 348 aa10.91□□□□□ -0.66
TCOF1-205ENST00000439160 MLF1P58340 268 aa10.91□□□□□ -0.66
TCOF1-205ENST00000439160 MGAT2Q10469 447 aa10.91□□□□□ -0.66
TCOF1-205ENST00000439160 SCCPDHQ8NBX0 429 aa10.91□□□□□ -0.66
TCOF1-205ENST00000439160 PLEKHF2Q9H8W4 249 aa10.91□□□□□ -0.66
TCOF1-205ENST00000439160 HS3ST3B1Q9Y662 390 aa10.91□□□□□ -0.66
TCOF1-205ENST00000439160 DOCK4Q8N1I0 1966 aa10.91□□□□□ -0.66
TCOF1-205ENST00000439160 F2RL1P55085 397 aa10.91□□□□□ -0.66
TCOF1-205ENST00000439160 PLPPR5Q32ZL2 321 aa10.91□□□□□ -0.66
TCOF1-205ENST00000439160 C22orf15Q8WYQ4 148 aa10.91□□□□□ -0.66
TCOF1-205ENST00000439160 MED30Q96HR3 178 aa10.91□□□□□ -0.66
TCOF1-205ENST00000439160 GSX2Q9BZM3 304 aa10.91□□□□□ -0.66
TCOF1-205ENST00000439160 ZNF230Q9UIE0 474 aaPredicted RBP10.91□□□□□ -0.66
TCOF1-205ENST00000439160 PPP1R3CQ9UQK1 317 aa10.91□□□□□ -0.66
TCOF1-205ENST00000439160 DSPPQ9NZW4 1301 aa10.91□□□□□ -0.66
TCOF1-205ENST00000439160 TRAV8-7A0A075B6U6 113 aa10.9□□□□□ -0.66
TCOF1-205ENST00000439160 TMEM127O75204 238 aa10.9□□□□□ -0.66
TCOF1-205ENST00000439160 IFNA10P01566 189 aa10.9□□□□□ -0.66
TCOF1-205ENST00000439160 NGFRP08138 427 aa10.9□□□□□ -0.66
TCOF1-205ENST00000439160 ASAH2BP0C7U1 165 aa10.9□□□□□ -0.66
TCOF1-205ENST00000439160 CA6P23280 308 aa10.9□□□□□ -0.66
TCOF1-205ENST00000439160 TGIF1Q15583 401 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms