RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 KLHL36Q8N4N3 616 aa11.08□□□□□ -0.64
LINC00399-201ENST00000439008 SPICQ8N5J4 248 aa11.08□□□□□ -0.64
LINC00399-201ENST00000439008 SPERTQ8NA61 448 aa11.08□□□□□ -0.64
LINC00399-201ENST00000439008 OR14K1Q8NGZ2 314 aa11.08□□□□□ -0.64
LINC00399-201ENST00000439008 OR8S1Q8NH09 359 aa11.08□□□□□ -0.64
LINC00399-201ENST00000439008 RPL3LQ92901 407 aaKnown RBP11.08□□□□□ -0.64
LINC00399-201ENST00000439008 DACT3Q96B18 629 aaPredicted RBP11.08□□□□□ -0.64
LINC00399-201ENST00000439008 MDFIQ99750 246 aa11.08□□□□□ -0.64
LINC00399-201ENST00000439008 CTSZQ9UBR2 303 aa11.08□□□□□ -0.64
LINC00399-201ENST00000439008 ZNF391Q9UJN7 358 aa11.08□□□□□ -0.64
LINC00399-201ENST00000439008 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.08□□□□□ -0.64
LINC00399-201ENST00000439008 NOP16Q9Y3C1 178 aaKnown RBP11.08□□□□□ -0.64
LINC00399-201ENST00000439008 PPIAL4AQ9Y536 164 aa11.08□□□□□ -0.64
LINC00399-201ENST00000439008 V9GYS6 101 aa11.08□□□□□ -0.64
LINC00399-201ENST00000439008 A0A1B0GW55 424 aa11.07□□□□□ -0.64
LINC00399-201ENST00000439008 A6NLC8 198 aa11.07□□□□□ -0.64
LINC00399-201ENST00000439008 LRRC30A6NM36 301 aa11.07□□□□□ -0.64
LINC00399-201ENST00000439008 A8MXK9 166 aa11.07□□□□□ -0.64
LINC00399-201ENST00000439008 CASQ2O14958 399 aaPredicted RBP11.07□□□□□ -0.64
LINC00399-201ENST00000439008 SULT1C4O75897 302 aa11.07□□□□□ -0.64
LINC00399-201ENST00000439008 TFF1P04155 84 aa11.07□□□□□ -0.64
LINC00399-201ENST00000439008 KRT8P05787 483 aa11.07□□□□□ -0.64
LINC00399-201ENST00000439008 DUX4L2P0CJ85 424 aa11.07□□□□□ -0.64
LINC00399-201ENST00000439008 DUX4L3P0CJ86 424 aa11.07□□□□□ -0.64
LINC00399-201ENST00000439008 DUX4L4P0CJ87 422 aa11.07□□□□□ -0.64
LINC00399-201ENST00000439008 DUX4L5P0CJ88 424 aa11.07□□□□□ -0.64
LINC00399-201ENST00000439008 DUX4L6P0CJ89 424 aa11.07□□□□□ -0.64
LINC00399-201ENST00000439008 DUX4L7P0CJ90 424 aa11.07□□□□□ -0.64
LINC00399-201ENST00000439008 AMY2BP19961 511 aa11.07□□□□□ -0.64
LINC00399-201ENST00000439008 ATP6V1E1P36543 226 aa11.07□□□□□ -0.64
LINC00399-201ENST00000439008 MAP2K3P46734 347 aa11.07□□□□□ -0.64
LINC00399-201ENST00000439008 NANOS3P60323 173 aaKnown RBP11.07□□□□□ -0.64
LINC00399-201ENST00000439008 CDONQ4KMG0 1287 aa11.07□□□□□ -0.64
LINC00399-201ENST00000439008 WDR38Q5JTN6 314 aa11.07□□□□□ -0.64
LINC00399-201ENST00000439008 CEP78Q5JTW2 689 aa11.07□□□□□ -0.64
LINC00399-201ENST00000439008 BCL2L15Q5TBC7 163 aa11.07□□□□□ -0.64
LINC00399-201ENST00000439008 OGFRL1Q5TC84 451 aaPredicted RBP11.07□□□□□ -0.64
LINC00399-201ENST00000439008 MEDAGQ5VYS4 303 aa11.07□□□□□ -0.64
LINC00399-201ENST00000439008 FAHD2BQ6P2I3 314 aaPredicted RBP11.07□□□□□ -0.64
LINC00399-201ENST00000439008 DUX4L9Q6RFH8 374 aaPredicted RBP11.07□□□□□ -0.64
LINC00399-201ENST00000439008 FAM90A1Q86YD7 464 aa11.07□□□□□ -0.64
LINC00399-201ENST00000439008 RDH10Q8IZV5 341 aa11.07□□□□□ -0.64
LINC00399-201ENST00000439008 FGFRL1Q8N441 504 aa11.07□□□□□ -0.64
LINC00399-201ENST00000439008 SCCPDHQ8NBX0 429 aa11.07□□□□□ -0.64
LINC00399-201ENST00000439008 OR11L1Q8NGX0 322 aa11.07□□□□□ -0.64
LINC00399-201ENST00000439008 FAHD2AQ96GK7 314 aa11.07□□□□□ -0.64
LINC00399-201ENST00000439008 WDR13Q9H1Z4 485 aa11.07□□□□□ -0.64
LINC00399-201ENST00000439008 C14orf119Q9NWQ9 140 aa11.07□□□□□ -0.64
LINC00399-201ENST00000439008 DUX4Q9UBX2 424 aa11.07□□□□□ -0.64
LINC00399-201ENST00000439008 PCDHB10Q9UN67 800 aa11.07□□□□□ -0.64
LINC00399-201ENST00000439008 PIGLQ9Y2B2 252 aa11.07□□□□□ -0.64
LINC00399-201ENST00000439008 POLR3KQ9Y2Y1 108 aaPredicted RBP11.07□□□□□ -0.64
LINC00399-201ENST00000439008 MPC1Q9Y5U8 109 aa11.07□□□□□ -0.64
LINC00399-201ENST00000439008 SNX5Q9Y5X3 404 aa11.07□□□□□ -0.64
LINC00399-201ENST00000439008 LOC105371242A0A075B767 164 aa11.06□□□□□ -0.64
LINC00399-201ENST00000439008 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.06□□□□□ -0.64
LINC00399-201ENST00000439008 ZNF816-ZNF321PA0A0X1KG74 233 aa11.06□□□□□ -0.64
LINC00399-201ENST00000439008 ERICH4A6NGS2 130 aa11.06□□□□□ -0.64
LINC00399-201ENST00000439008 LGALS8O00214 317 aa11.06□□□□□ -0.64
LINC00399-201ENST00000439008 CDIPTO14735 213 aa11.06□□□□□ -0.64
LINC00399-201ENST00000439008 RHBDL1O75783 438 aa11.06□□□□□ -0.64
LINC00399-201ENST00000439008 DHRS3O75911 302 aa11.06□□□□□ -0.64
LINC00399-201ENST00000439008 GNAO1P09471 354 aa11.06□□□□□ -0.64
LINC00399-201ENST00000439008 SRD5A1P18405 259 aa11.06□□□□□ -0.64
LINC00399-201ENST00000439008 ADRA2CP18825 462 aa11.06□□□□□ -0.64
LINC00399-201ENST00000439008 CCL1P22362 96 aa11.06□□□□□ -0.64
LINC00399-201ENST00000439008 GNALP38405 381 aa11.06□□□□□ -0.64
LINC00399-201ENST00000439008 GPM6AP51674 278 aa11.06□□□□□ -0.64
LINC00399-201ENST00000439008 ZNF691Q5VV52 312 aa11.06□□□□□ -0.64
LINC00399-201ENST00000439008 TMEM42Q69YG0 159 aa11.06□□□□□ -0.64
LINC00399-201ENST00000439008 LAIR2Q6ISS4 152 aa11.06□□□□□ -0.64
LINC00399-201ENST00000439008 LHFPL3Q86UP9 236 aa11.06□□□□□ -0.64
LINC00399-201ENST00000439008 COMMD2Q86X83 199 aa11.06□□□□□ -0.64
LINC00399-201ENST00000439008 ZDHHC23Q8IYP9 409 aa11.06□□□□□ -0.64
LINC00399-201ENST00000439008 C1orf87Q8N0U7 546 aa11.06□□□□□ -0.64
LINC00399-201ENST00000439008 MUC20Q8N307 709 aaPredicted RBP11.06□□□□□ -0.64
LINC00399-201ENST00000439008 SEMA6DQ8NFY4 1073 aa11.06□□□□□ -0.64
LINC00399-201ENST00000439008 OR52I1Q8NGK6 324 aa11.06□□□□□ -0.64
LINC00399-201ENST00000439008 CNIH3Q8TBE1 160 aa11.06□□□□□ -0.64
LINC00399-201ENST00000439008 LRRC29Q8WV35 223 aa11.06□□□□□ -0.64
LINC00399-201ENST00000439008 NRG4Q8WWG1 115 aa11.06□□□□□ -0.64
LINC00399-201ENST00000439008 RNF170Q96K19 258 aa11.06□□□□□ -0.64
LINC00399-201ENST00000439008 RDH12Q96NR8 316 aa11.06□□□□□ -0.64
LINC00399-201ENST00000439008 RASSF4Q9H2L5 321 aa11.06□□□□□ -0.64
LINC00399-201ENST00000439008 ISG20L2Q9H9L3 353 aaKnown RBP11.06□□□□□ -0.64
LINC00399-201ENST00000439008 SMURF1Q9HCE7 757 aa11.06□□□□□ -0.64
LINC00399-201ENST00000439008 MRPS18AQ9NVS2 196 aaKnown RBP11.06□□□□□ -0.64
LINC00399-201ENST00000439008 FRRS1LQ9P0K9 344 aa11.06□□□□□ -0.64
LINC00399-201ENST00000439008 LPAR3Q9UBY5 353 aa11.06□□□□□ -0.64
LINC00399-201ENST00000439008 GNG8Q9UK08 70 aa11.06□□□□□ -0.64
LINC00399-201ENST00000439008 hCG_1807616A0A1W2PRN6 198 aa11.05□□□□□ -0.64
LINC00399-201ENST00000439008 DAPL1A0PJW8 107 aa11.05□□□□□ -0.64
LINC00399-201ENST00000439008 E9PI62 339 aa11.05□□□□□ -0.64
LINC00399-201ENST00000439008 FSHBP01225 129 aa11.05□□□□□ -0.64
LINC00399-201ENST00000439008 IGHA1P01876 353 aa11.05□□□□□ -0.64
LINC00399-201ENST00000439008 GYPAP02724 150 aa11.05□□□□□ -0.64
LINC00399-201ENST00000439008 IRF2P14316 349 aa11.05□□□□□ -0.64
LINC00399-201ENST00000439008 RPS2P15880 293 aaKnown RBP11.05□□□□□ -0.64
LINC00399-201ENST00000439008 CFHR2P36980 270 aa11.05□□□□□ -0.64
LINC00399-201ENST00000439008 GMFBP60983 142 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms