RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 S1PR5Q9H228 398 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 C1orf123Q9NWV4 160 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 B3GALT5Q9Y2C3 310 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 RHBDD3Q9Y3P4 386 aa10.24□□□□□ -0.77
HMGCS1-202ENST00000433297 LOC390937A0A1W2PQ73 354 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 CLDN4O14493 209 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 KAT7O95251 611 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 JMJD7P0C870 316 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 CSF2RAP15509 400 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 HIST1H1DP16402 221 aaKnown RBP10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 GABRA4P48169 554 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 ZNF542PQ5EBM4 170 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 AADACL3Q5VUY0 350 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 OR2T2Q6IF00 324 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 OR51T1Q8NGJ9 327 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 BAHD1Q8TBE0 780 aaPredicted RBP10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 MISP3Q96FF7 219 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 NXF5Q9H1B4 397 aaKnown RBP10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 FAM86C1Q9NVL1 165 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 HDGFL3Q9Y3E1 203 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 CHD7Q9P2D1 2997 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 LINC01553A4QN01 128 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 ZNF587BE7ETH6 402 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 TERTO14746 1132 aaKnown RBP10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 HEXBP07686 556 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 DANCRP0C864 163 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 HSD11B1P28845 292 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 PTGER4P35408 488 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 TMEM50BP56557 158 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 RAB1AP62820 205 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 NHLH2Q02577 135 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 GPM6BQ13491 265 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 KHDC3LQ587J8 217 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 AKR1C8PQ5T2L2 129 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 GGNBP1Q5YKI7 109 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 P4HA3Q7Z4N8 544 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 Q8WTZ3 238 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 LIPHQ8WWY8 451 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 TOMM40LQ969M1 308 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 MALSU1Q96EH3 234 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 TCTN2Q96GX1 697 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 DEFB118Q96PH6 123 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 MESP1Q9BRJ9 268 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 SZT2Q5T011 3432 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 H0YL77 283 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 TNFSF14O43557 240 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 DEDDO75618 318 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 CRABP1P29762 137 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 THBS4P35443 961 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 GPR3P46089 330 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 GAB4Q2WGN9 574 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 C2orf27AQ580R0 203 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 C1orf140Q5VVS0 124 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 REC114Q7Z4M0 266 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 OOSP2Q86WS3 158 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 SGPP2Q8IWX5 399 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 MRPL43Q8N983 215 aaKnown RBP10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 ZNF248Q8NDW4 579 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 NTNG2Q96CW9 530 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 RAB39BQ96DA2 213 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 WFDC1Q9HC57 220 aa10.23□□□□□ -0.77
HMGCS1-202ENST00000433297 NUP210LQ5VU65 1888 aa10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 TRAV36DV7A0A075B6V5 113 aa10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 ARGFXA6NJG6 315 aa10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 CDRT15L2A8MXV6 281 aa10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 C17orf105B2RV13 164 aa10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 H0YIG0 161 aa10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 H3BQ15 152 aa10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 HIST1H2BKO60814 126 aa10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 HIST1H2BJP06899 126 aa10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 IL11P20809 199 aa10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 HIST1H2BOP23527 126 aa10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 HIST1H2BBP33778 126 aa10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 HIST1H2BDP58876 126 aa10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 TAS2R60P59551 318 aa10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 HIST1H2BCP62807 126 aa10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 CCL20P78556 96 aa10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 QRFPP83859 136 aa10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 ZNF117Q03924 483 aa10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 HIST2H2BEQ16778 126 aa10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 TMEM31Q5JXX7 168 aa10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 ABHD12BQ7Z5M8 362 aaPredicted RBP10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 SULF2Q8IWU5 870 aa10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 TMEM156Q8N614 296 aa10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 ZFP62Q8NB50 900 aaPredicted RBP10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 SLC26A10Q8NG04 563 aa10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 HIST1H2BHQ93079 126 aa10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 MMABQ96EY8 250 aaPredicted RBP10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 HIST1H2BNQ99877 126 aa10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 HIST1H2BMQ99879 126 aa10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 EMC6Q9BV81 110 aa10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 THAP10Q9P2Z0 257 aaPredicted RBP10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 POLR1DQ9Y2S0 133 aa10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 SEC14L6B5MCN3 397 aa10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 FKTNO75072 461 aa10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 TTRP02766 147 aa10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 BGLAPP02818 100 aa10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 CHRM2P08172 466 aa10.22□□□□□ -0.77
HMGCS1-202ENST00000433297 MDKP21741 143 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms