RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 WISP3O95389 354 aaPredicted RBP1.99□□□□□ -2.09
CLK1-204ENST00000432425 ATP6V1G2O95670 118 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 IFNA21P01568 189 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 ORM1P02763 201 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 PPBPP02775 128 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 RHOCP08134 193 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 BCKDHAP12694 445 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 H2AFXP16104 143 aaPredicted RBP1.99□□□□□ -2.09
CLK1-204ENST00000432425 NUDT1P36639 197 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 RPL13AP40429 203 aaKnown RBP1.99□□□□□ -2.09
CLK1-204ENST00000432425 NSG1P42857 185 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 RPS10P46783 165 aaKnown RBP1.99□□□□□ -2.09
CLK1-204ENST00000432425 GSSP48637 474 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 LIM2P55344 173 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 OR4D2P58180 307 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 OR10A3P58181 314 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 HMGCS1Q01581 520 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 SEMG2Q02383 582 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 ACVR1Q04771 509 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 ST3GAL3Q11203 375 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 PSG5Q15238 335 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 SF3A2Q15428 464 aaKnown RBP1.99□□□□□ -2.09
CLK1-204ENST00000432425 DGUOKQ16854 277 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 OR2G6Q5TZ20 316 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 SDHAF4Q5VUM1 108 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 FAM45BPQ6NSW5 357 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 FAHD2BQ6P2I3 314 aaPredicted RBP1.99□□□□□ -2.09
CLK1-204ENST00000432425 DRAM2Q6UX65 266 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 CASP12Q6UXS9 341 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 GDPD3Q7L5L3 318 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 OR2W3Q7Z3T1 314 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 TMEM144Q7Z5S9 345 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 PHF13Q86YI8 300 aaPredicted RBP1.99□□□□□ -2.09
CLK1-204ENST00000432425 APRG1Q8IVJ8 170 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 OR6V1Q8N148 313 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 JAGN1Q8N5M9 183 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 UBL4BQ8N7F7 174 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 CCDC54Q8NEL0 328 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 LFNGQ8NES3 379 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 ATP6V1C2Q8NEY4 427 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 OR4D9Q8NGE8 314 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 OR10W1Q8NGF6 305 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 OR9A2Q8NGT5 310 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 OR6K3Q8NGY3 331 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 RNASE11Q8TAA1 199 aaKnown RBP1.99□□□□□ -2.09
CLK1-204ENST00000432425 LHFPL5Q8TAF8 219 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 NEIL3Q8TAT5 605 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 SDR42E1Q8WUS8 393 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 IL1F10Q8WWZ1 152 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 TCEAL4Q96EI5 215 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 FAHD2AQ96GK7 314 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 MS4A14Q96JA4 679 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 ZNF488Q96MN9 340 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 RILPQ96NA2 401 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 SERPINB12Q96P63 405 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 PPP1R2P1Q96PQ5 205 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 CNN2Q99439 309 aaKnown RBP1.99□□□□□ -2.09
CLK1-204ENST00000432425 TSNAXQ99598 290 aaKnown RBP1.99□□□□□ -2.09
CLK1-204ENST00000432425 SLC35A5Q9BS91 424 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 FAIM2Q9BWQ8 316 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 CDCA4Q9BXL8 241 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 ACTR3CQ9C0K3 210 aaPredicted RBP1.99□□□□□ -2.09
CLK1-204ENST00000432425 UGT1A7Q9HAW7 530 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 UGT1A8Q9HAW9 530 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 TMBIM4Q9HC24 238 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 EML4Q9HC35 981 aaKnown RBP1.99□□□□□ -2.09
CLK1-204ENST00000432425 FGF20Q9NP95 211 aaPredicted RBP1.99□□□□□ -2.09
CLK1-204ENST00000432425 ACP6Q9NPH0 428 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 DDX19AQ9NUU7 478 aaKnown RBP1.99□□□□□ -2.09
CLK1-204ENST00000432425 FGFR1OP2Q9NVK5 253 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 GPATCH2LQ9NWQ4 482 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 SLC25A37Q9NYZ2 338 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 NUP50Q9UKX7 468 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 UBQLN1Q9UMX0 589 aaKnown RBP1.99□□□□□ -2.09
CLK1-204ENST00000432425 TFR2Q9UP52 801 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 FARSAQ9Y285 508 aaKnown RBP1.99□□□□□ -2.09
CLK1-204ENST00000432425 SLC17A4Q9Y2C5 497 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 RCL1Q9Y2P8 373 aaKnown RBP1.99□□□□□ -2.09
CLK1-204ENST00000432425 FLT4P35916 1363 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 NID2Q14112 1375 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 YLPM1P49750 1951 aaKnown RBP1.99□□□□□ -2.09
CLK1-204ENST00000432425 A0A1W2PRF3 423 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 A0A1W2PRM7 423 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 A6NIZ1 184 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 RFPL4AA6NLU0 287 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 FTCDNL1E5RQL4 147 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 RFPL4AL1F8VTS6 287 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 SIRPB1O00241 398 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 DCTN6O00399 190 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 PLPP1O14494 284 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 SLC16A4O15374 487 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 RGS16O15492 202 aaPredicted RBP1.99□□□□□ -2.09
CLK1-204ENST00000432425 FADS1O60427 444 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 MPZL2O60487 215 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 EIF4E2O60573 245 aaKnown RBP1.99□□□□□ -2.09
CLK1-204ENST00000432425 ICOSLGO75144 302 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 LRATO95237 230 aa1.99□□□□□ -2.09
CLK1-204ENST00000432425 CYB5R3P00387 301 aaPredicted RBP1.99□□□□□ -2.09
CLK1-204ENST00000432425 PCCAP05165 728 aaPredicted RBP1.99□□□□□ -2.09
CLK1-204ENST00000432425 IGHV4-34P06331 123 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms