RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 ZNF816-ZNF321PA0A0X1KG74 233 aa10.49□□□□□ -0.73
USP40-205ENST00000430158 ERCC1P07992 297 aaPredicted RBP10.49□□□□□ -0.73
USP40-205ENST00000430158 UBCP0CG48 685 aaKnown RBP10.49□□□□□ -0.73
USP40-205ENST00000430158 FAHP16930 419 aa10.49□□□□□ -0.73
USP40-205ENST00000430158 DSCR9P59020 149 aa10.49□□□□□ -0.73
USP40-205ENST00000430158 ACSM1Q08AH1 577 aa10.49□□□□□ -0.73
USP40-205ENST00000430158 RIPPLY1Q0D2K3 151 aa10.49□□□□□ -0.73
USP40-205ENST00000430158 ODF4Q2M2E3 257 aa10.49□□□□□ -0.73
USP40-205ENST00000430158 FAM76BQ5HYJ3 339 aa10.49□□□□□ -0.73
USP40-205ENST00000430158 TMEM244Q5VVB8 128 aa10.49□□□□□ -0.73
USP40-205ENST00000430158 PRSS48Q7RTY5 328 aa10.49□□□□□ -0.73
USP40-205ENST00000430158 CCDC54Q8NEL0 328 aa10.49□□□□□ -0.73
USP40-205ENST00000430158 SEMA6DQ8NFY4 1073 aa10.49□□□□□ -0.73
USP40-205ENST00000430158 OR51A4Q8NGJ6 313 aa10.49□□□□□ -0.73
USP40-205ENST00000430158 OR5P3Q8WZ94 311 aa10.49□□□□□ -0.73
USP40-205ENST00000430158 PGLYRP3Q96LB9 341 aa10.49□□□□□ -0.73
USP40-205ENST00000430158 Q96MF0 132 aa10.49□□□□□ -0.73
USP40-205ENST00000430158 OR2V2Q96R30 315 aa10.49□□□□□ -0.73
USP40-205ENST00000430158 OR5M11Q96RB7 305 aa10.49□□□□□ -0.73
USP40-205ENST00000430158 YTHDF1Q9BYJ9 559 aaKnown RBP10.49□□□□□ -0.73
USP40-205ENST00000430158 Q9H521 79 aa10.49□□□□□ -0.73
USP40-205ENST00000430158 SAP30LQ9HAJ7 183 aa10.49□□□□□ -0.73
USP40-205ENST00000430158 GCM1Q9NP62 436 aa10.49□□□□□ -0.73
USP40-205ENST00000430158 ZNF275Q9NSD4 429 aaPredicted RBP10.49□□□□□ -0.73
USP40-205ENST00000430158 PIGLQ9Y2B2 252 aa10.49□□□□□ -0.73
USP40-205ENST00000430158 MPC1Q9Y5U8 109 aa10.49□□□□□ -0.73
USP40-205ENST00000430158 ARHGAP32A7KAX9 2087 aa10.49□□□□□ -0.73
USP40-205ENST00000430158 IGHV1-69-2A0A0G2JMI3 117 aa10.48□□□□□ -0.73
USP40-205ENST00000430158 TRIM64BA6NI03 449 aa10.48□□□□□ -0.73
USP40-205ENST00000430158 ANKRD30BLA7E2S9 258 aa10.48□□□□□ -0.73
USP40-205ENST00000430158 ZNF850A8MQ14 1090 aa10.48□□□□□ -0.73
USP40-205ENST00000430158 SYT7O43581 403 aa10.48□□□□□ -0.73
USP40-205ENST00000430158 RGS10O43665 173 aa10.48□□□□□ -0.73
USP40-205ENST00000430158 CD1AP06126 327 aa10.48□□□□□ -0.73
USP40-205ENST00000430158 CSF3P09919 207 aa10.48□□□□□ -0.73
USP40-205ENST00000430158 ACHEP22303 614 aa10.48□□□□□ -0.73
USP40-205ENST00000430158 PDLIM4P50479 330 aa10.48□□□□□ -0.73
USP40-205ENST00000430158 WNT4P56705 351 aa10.48□□□□□ -0.73
USP40-205ENST00000430158 GABARAPL2P60520 117 aa10.48□□□□□ -0.73
USP40-205ENST00000430158 RPS11P62280 158 aaKnown RBP eCLIP10.48□□□□□ -0.73
USP40-205ENST00000430158 PRDX4Q13162 271 aa10.48□□□□□ -0.73
USP40-205ENST00000430158 OR8G1Q15617 311 aa10.48□□□□□ -0.73
USP40-205ENST00000430158 MPPED2Q15777 294 aa10.48□□□□□ -0.73
USP40-205ENST00000430158 CIARTQ8N365 385 aaPredicted RBP10.48□□□□□ -0.73
USP40-205ENST00000430158 SPERTQ8NA61 448 aa10.48□□□□□ -0.73
USP40-205ENST00000430158 Q8TCH9 128 aa10.48□□□□□ -0.73
USP40-205ENST00000430158 FAM168AQ92567 244 aa10.48□□□□□ -0.73
USP40-205ENST00000430158 HPS1Q92902 700 aa10.48□□□□□ -0.73
USP40-205ENST00000430158 ADAT3Q96EY9 351 aaPredicted RBP10.48□□□□□ -0.73
USP40-205ENST00000430158 PDCD1LG2Q9BQ51 273 aa10.48□□□□□ -0.73
USP40-205ENST00000430158 ADAT1Q9BUB4 502 aaKnown RBP10.48□□□□□ -0.73
USP40-205ENST00000430158 EGLN1Q9GZT9 426 aa10.48□□□□□ -0.73
USP40-205ENST00000430158 TLNRD1Q9H1K6 362 aa10.48□□□□□ -0.73
USP40-205ENST00000430158 CHODLQ9H9P2 273 aa10.48□□□□□ -0.73
USP40-205ENST00000430158 DECR2Q9NUI1 292 aa10.48□□□□□ -0.73
USP40-205ENST00000430158 CHCHD3Q9NX63 227 aaKnown RBP10.48□□□□□ -0.73
USP40-205ENST00000430158 TRBV2A0A0J9YWF9 115 aa10.47□□□□□ -0.73
USP40-205ENST00000430158 A0A1B0GVI7 797 aa10.47□□□□□ -0.73
USP40-205ENST00000430158 TMEM212A6NML5 194 aa10.47□□□□□ -0.73
USP40-205ENST00000430158 H3BSH0 61 aa10.47□□□□□ -0.73
USP40-205ENST00000430158 NDUFS8O00217 210 aa10.47□□□□□ -0.73
USP40-205ENST00000430158 CDC14BO60729 498 aa10.47□□□□□ -0.73
USP40-205ENST00000430158 MTRF1O75570 445 aaKnown RBP10.47□□□□□ -0.73
USP40-205ENST00000430158 TNFSF4P23510 183 aa10.47□□□□□ -0.73
USP40-205ENST00000430158 THBS2P35442 1172 aa10.47□□□□□ -0.73
USP40-205ENST00000430158 MAP2K4P45985 399 aa10.47□□□□□ -0.73
USP40-205ENST00000430158 SRP9P49458 86 aaKnown RBP10.47□□□□□ -0.73
USP40-205ENST00000430158 TMEM33P57088 247 aa10.47□□□□□ -0.73
USP40-205ENST00000430158 BDH1Q02338 343 aa10.47□□□□□ -0.73
USP40-205ENST00000430158 MED21Q13503 144 aa10.47□□□□□ -0.73
USP40-205ENST00000430158 ZNF181Q2M3W8 571 aa10.47□□□□□ -0.73
USP40-205ENST00000430158 PRAMEF6Q5VXH4 476 aa10.47□□□□□ -0.73
USP40-205ENST00000430158 ASPHD2Q6ICH7 369 aa10.47□□□□□ -0.73
USP40-205ENST00000430158 CLEC2AQ6UVW9 174 aa10.47□□□□□ -0.73
USP40-205ENST00000430158 ZFP41Q8N8Y5 198 aa10.47□□□□□ -0.73
USP40-205ENST00000430158 OR5AK2Q8NH90 309 aa10.47□□□□□ -0.73
USP40-205ENST00000430158 PIGCQ92535 297 aa10.47□□□□□ -0.73
USP40-205ENST00000430158 C10orf35Q96D05 121 aa10.47□□□□□ -0.73
USP40-205ENST00000430158 SMIM19Q96E16 107 aa10.47□□□□□ -0.73
USP40-205ENST00000430158 PAPOLGQ9BWT3 736 aaKnown RBP10.47□□□□□ -0.73
USP40-205ENST00000430158 ENPP5Q9UJA9 477 aa10.47□□□□□ -0.73
USP40-205ENST00000430158 HHLA2Q9UM44 414 aa10.47□□□□□ -0.73
USP40-205ENST00000430158 ERGIC3Q9Y282 383 aa10.47□□□□□ -0.73
USP40-205ENST00000430158 NOP16Q9Y3C1 178 aaKnown RBP10.47□□□□□ -0.73
USP40-205ENST00000430158 NSD1Q96L73 2696 aaPredicted RBP10.47□□□□□ -0.73
USP40-205ENST00000430158 IGHV3-64DA0A0J9YX35 117 aa10.46□□□□□ -0.73
USP40-205ENST00000430158 TRBV5-5A0A0J9YX44 114 aa10.46□□□□□ -0.73
USP40-205ENST00000430158 A6NIN4 97 aa10.46□□□□□ -0.73
USP40-205ENST00000430158 WNT9BO14905 357 aa10.46□□□□□ -0.73
USP40-205ENST00000430158 PLPP2O43688 288 aa10.46□□□□□ -0.73
USP40-205ENST00000430158 MRPS14O60783 128 aaKnown RBP10.46□□□□□ -0.73
USP40-205ENST00000430158 TNFRSF1AP19438 455 aa10.46□□□□□ -0.73
USP40-205ENST00000430158 CFHR2P36980 270 aa10.46□□□□□ -0.73
USP40-205ENST00000430158 NR4A2P43354 598 aa10.46□□□□□ -0.73
USP40-205ENST00000430158 ZNF154Q13106 437 aa10.46□□□□□ -0.73
USP40-205ENST00000430158 SPHARQ15513 63 aa10.46□□□□□ -0.73
USP40-205ENST00000430158 UBE2V2Q15819 145 aa10.46□□□□□ -0.73
USP40-205ENST00000430158 CEACAM21Q3KPI0 293 aa10.46□□□□□ -0.73
USP40-205ENST00000430158 DMRTC1Q5HYR2 192 aa10.46□□□□□ -0.73
USP40-205ENST00000430158 CLVS2Q5SYC1 327 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms