RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 SOX8P57073 446 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 ERVFC1-1P60608 527 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 H3F3AP84243 136 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 EIF2B1Q14232 305 aaKnown RBP4.55□□□□□ -1.68
RIF1-203ENST00000428287 CCL14Q16627 93 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 DCAF10Q5QP82 559 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 BTNL3Q6UXE8 466 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 GVQW1Q8N7I0 195 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 OR4D6Q8NGJ1 314 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 ZNF845Q96IR2 970 aaPredicted RBP4.55□□□□□ -1.68
RIF1-203ENST00000428287 AMELYQ99218 206 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 PRRX2Q99811 253 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 ANGPTL4Q9BY76 406 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 ZDHHC4Q9NPG8 344 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 APOBEC3BQ9UH17 382 aaKnown RBP4.55□□□□□ -1.68
RIF1-203ENST00000428287 CSMD1Q96PZ7 3565 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 FOXI3A8MTJ6 420 aaPredicted RBP4.55□□□□□ -1.68
RIF1-203ENST00000428287 CYR61O00622 381 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 SFT2D2O95562 160 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 OPN1MWP04001 364 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 MAS1P04201 325 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 TYMSP04818 313 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 PFN1P07737 140 aaKnown RBP4.55□□□□□ -1.68
RIF1-203ENST00000428287 SRP19P09132 144 aaKnown RBP4.55□□□□□ -1.68
RIF1-203ENST00000428287 OPN1MW2P0DN77 364 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 OPN1MW3P0DN78 364 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 FPR2P25090 351 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 GDI1P31150 447 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 CLDN2P57739 230 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 DLK1P80370 383 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 GLO1Q04760 184 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 PPA1Q15181 289 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 CBLN3Q6UW01 205 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 TMEM183AQ8IXX5 376 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 OR10AD1Q8NGE0 317 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 C8orf44Q96CB5 159 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 ABHD14BQ96IU4 210 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 SLC46A2Q9BY10 475 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 CREBZFQ9NS37 354 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 TM7SF3Q9NS93 570 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 CKLFQ9UBR5 152 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 OR14J1Q9UGF5 321 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 HSF4Q9ULV5 492 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 PSMD9O00233 223 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 CRTAPO75718 401 aaPredicted RBP4.55□□□□□ -1.68
RIF1-203ENST00000428287 ZFP36L1Q07352 338 aaKnown RBP4.55□□□□□ -1.68
RIF1-203ENST00000428287 CCINQ13939 588 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 HNRNPA1L2Q32P51 320 aaKnown RBP4.55□□□□□ -1.68
RIF1-203ENST00000428287 KRBOX4Q5JUW0 171 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 DCST2Q5T1A1 773 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 PARS2Q7L3T8 475 aaKnown RBP4.55□□□□□ -1.68
RIF1-203ENST00000428287 ATG4DQ86TL0 474 aaPredicted RBP4.55□□□□□ -1.68
RIF1-203ENST00000428287 SLC35G3Q8N808 338 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 FRMD1Q8N878 549 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 NT5CQ8TCD5 201 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 RAB39BQ96DA2 213 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 OR11A1Q9GZK7 315 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 HOXA2O43364 376 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 TRGC2P03986 189 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 EPHA1P21709 976 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 ID4P47928 161 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 RGS19P49795 217 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 ACY1Q03154 408 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 EGR4Q05215 589 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 ROBO4Q8WZ75 1007 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 RASD2Q96D21 266 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 ABHD6Q9BV23 337 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 ZDHHC6Q9H6R6 413 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 SPHK2Q9NRA0 654 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 COLEC10Q9Y6Z7 277 aa4.55□□□□□ -1.68
RIF1-203ENST00000428287 C5orf51A6NDU8 294 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 PNMTP11086 282 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 RPS10P46783 165 aaKnown RBP4.54□□□□□ -1.68
RIF1-203ENST00000428287 SKP1P63208 163 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 PLAC9Q5JTB6 97 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 AKR1C8PQ5T2L2 129 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 ZNF440Q8IYI8 595 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 ZNF101Q8IZC7 436 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 OR8S1Q8NH09 359 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 FGF14Q92915 247 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 PACRGQ96M98 296 aaPredicted RBP4.54□□□□□ -1.68
RIF1-203ENST00000428287 TMEM208Q9BTX3 173 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 DDA1Q9BW61 102 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 MRPS18CQ9Y3D5 142 aaKnown RBP4.54□□□□□ -1.68
RIF1-203ENST00000428287 INSL5Q9Y5Q6 135 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 MEIS3P1A6NDR6 274 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 APBB3O95704 486 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 HEXBP07686 556 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 CT45A8P0DMV1 189 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 CT45A9P0DMV2 189 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 PSMB5P28074 263 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 CT45A2Q5DJT8 189 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 C1orf194Q5T5A4 169 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 SLC16A14Q7RTX9 510 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 OR6N2Q8NGY6 317 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 TRIM43Q96BQ3 446 aaPredicted RBP4.54□□□□□ -1.68
RIF1-203ENST00000428287 ZNF558Q96NG5 402 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 OR2AG1Q9H205 316 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 FARSAQ9Y285 508 aaKnown RBP4.54□□□□□ -1.68
RIF1-203ENST00000428287 ITGB1BP1O14713 200 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms